prot_Ecto-sp8_S_contig10933.1305.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig10933.1305.1
Unique Name	prot_Ecto-sp8_S_contig10933.1305.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	97

Homology

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BLAST of mRNA_Ecto-sp8_S_contig10933.1305.1 vs. uniprot
Match: A0A6H5K0C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C4_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 2.340e-11
Identity = 30/38 (78.95%), Postives = 35/38 (92.11%), Query Frame = 0

Query:    6 AIREKVLGPEHPDVAQSLNNRAGLLESQGKYSEAEPLY 43
            AI+EKVLGP+HP +A +LNNRAGLLE+QGKY EAEPLY
Sbjct:   84 AIKEKVLGPDHPSLATTLNNRAGLLEAQGKYVEAEPLY 121

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BLAST of mRNA_Ecto-sp8_S_contig10933.1305.1 vs. uniprot
Match: A0A1F2STV2_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13 TaxID=1797178 RepID=A0A1F2STV2_9BACT)

HSP 1 Score: 61.6 bits (148), Expect = 2.110e-10
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0

Query:    6 AIREKVLGPEHPDVAQSLNNRAGLLESQGKYSEAEPLY 43
            AI EK LGPEHP+V QSLNN AGL  +QGKY++AEPLY
Sbjct:    2 AIWEKALGPEHPNVGQSLNNLAGLYAAQGKYADAEPLY 39

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BLAST of mRNA_Ecto-sp8_S_contig10933.1305.1 vs. uniprot
Match: UPI001914FD80 (tetratricopeptide repeat protein n=2 Tax=Ktedonobacter robiniae TaxID=2778365 RepID=UPI001914FD80)

HSP 1 Score: 65.1 bits (157), Expect = 3.270e-10
Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 0

Query:    3 RSQAIREKVLGPEHPDVAQSLNNRAGLLESQGKYSEAEPLY 43
            R   +REKVLGPEHPD A+SLNN AGL +SQGKY  AEPLY
Sbjct:   28 RGMLLREKVLGPEHPDTARSLNNLAGLYKSQGKYELAEPLY 68

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BLAST of mRNA_Ecto-sp8_S_contig10933.1305.1 vs. uniprot
Match: A0A841V5S9_9NOSO (Tetratricopeptide repeat protein n=3 Tax=unclassified Nostoc TaxID=2593658 RepID=A0A841V5S9_9NOSO)

HSP 1 Score: 63.9 bits (154), Expect = 4.200e-10
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0

Query:    6 AIREKVLGPEHPDVAQSLNNRAGLLESQGKYSEAEPLY 43
            A+R K+LG EHPDVA SLNN AGL +SQG+YSEAEPLY
Sbjct:    5 ALRRKLLGEEHPDVATSLNNLAGLYDSQGRYSEAEPLY 42

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BLAST of mRNA_Ecto-sp8_S_contig10933.1305.1 vs. uniprot
Match: A0A1B7VCZ1_9NOST (Uncharacterized protein (Fragment) n=1 Tax=Anabaena sp. LE011-02 TaxID=1710892 RepID=A0A1B7VCZ1_9NOST)

HSP 1 Score: 59.7 bits (143), Expect = 6.510e-10
Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 0

Query:    8 REKVLGPEHPDVAQSLNNRAGLLESQGKYSEAEPLY 43
            R+K+LG +HPDVA SLNN AGL  SQGKY+EAEPLY
Sbjct:    1 RQKLLGDDHPDVASSLNNLAGLYYSQGKYNEAEPLY 36

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BLAST of mRNA_Ecto-sp8_S_contig10933.1305.1 vs. uniprot
Match: A0A535FJA6_9CHLR (Tetratricopeptide repeat protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535FJA6_9CHLR)

HSP 1 Score: 59.7 bits (143), Expect = 1.230e-9
Identity = 29/43 (67.44%), Postives = 33/43 (76.74%), Query Frame = 0

Query:    1 YERSQAIREKVLGPEHPDVAQSLNNRAGLLESQGKYSEAEPLY 43
            Y R+ AI E+ LGP HPD+A SLNN A L  SQGK+SEAEPLY
Sbjct:    2 YTRALAIYERHLGPTHPDMASSLNNLALLYNSQGKFSEAEPLY 44

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BLAST of mRNA_Ecto-sp8_S_contig10933.1305.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.620e-9
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0

Query:    2 ERSQAIREKVLGPEHPDVAQSLNNRAGLLESQ 33
            ERSQ IREKVLGPEHPDVAQSLNNRAGLLE+Q
Sbjct:  509 ERSQTIREKVLGPEHPDVAQSLNNRAGLLEAQ 540

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BLAST of mRNA_Ecto-sp8_S_contig10933.1305.1 vs. uniprot
Match: A0A838GVB0_9BACT (CHAT domain-containing protein n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A838GVB0_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 2.230e-9
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 0

Query:    1 YERSQAIREKVLGPEHPDVAQSLNNRAGLLESQGKYSEAEPLY 43
            Y+RS AIREK LG +HPDVA SLNN AGL E++G Y+ AEPL+
Sbjct:    1 YQRSLAIREKALGAQHPDVAVSLNNLAGLYEAKGDYARAEPLH 43

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BLAST of mRNA_Ecto-sp8_S_contig10933.1305.1 vs. uniprot
Match: A0A6H5JIH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH9_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 2.340e-9
Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0

Query:    1 YERSQAIREKVLGPEHPDVAQSLNNRAGLLESQGKYSEAEPLY 43
            YERSQAI  KV+GPEHPDVA  L NRA LL  +GK +EAEPLY
Sbjct: 1651 YERSQAITAKVIGPEHPDVATVLKNRALLLAYEGKDAEAEPLY 1693

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BLAST of mRNA_Ecto-sp8_S_contig10933.1305.1 vs. uniprot
Match: UPI001FB5CE29 (tetratricopeptide repeat protein n=1 Tax=Nostoc sp. RF31YmG TaxID=1932668 RepID=UPI001FB5CE29)

HSP 1 Score: 59.3 bits (142), Expect = 2.420e-9
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 0

Query:    1 YERSQAIREKVLGPEHPDVAQSLNNRAGLLESQGKYSEAEP 41
            Y +S ++R ++LG EHPDVA SLNN AGL +SQG+YSEAEP
Sbjct:    4 YLQSLSLRRRLLGEEHPDVATSLNNLAGLYKSQGRYSEAEP 44

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig10933.1305.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig10933.1305.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K0C4_9PHAE	2.340e-11	78.95	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A1F2STV2_9BACT	2.110e-10	73.68	Uncharacterized protein n=1 Tax=Acidobacteria bact...	[more]
UPI001914FD80	3.270e-10	73.17	tetratricopeptide repeat protein n=2 Tax=Ktedonoba...	[more]
A0A841V5S9_9NOSO	4.200e-10	76.32	Tetratricopeptide repeat protein n=3 Tax=unclassif...	[more]
A0A1B7VCZ1_9NOST	6.510e-10	75.00	Uncharacterized protein (Fragment) n=1 Tax=Anabaen...	[more]
A0A535FJA6_9CHLR	1.230e-9	67.44	Tetratricopeptide repeat protein n=1 Tax=Chlorofle...	[more]
A0A6H5KIY6_9PHAE	1.620e-9	93.75	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A838GVB0_9BACT	2.230e-9	67.44	CHAT domain-containing protein n=1 Tax=Pyrinomonad...	[more]
A0A6H5JIH9_9PHAE	2.340e-9	72.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
UPI001FB5CE29	2.420e-9	65.85	tetratricopeptide repeat protein n=1 Tax=Nostoc sp...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002151	Kinesin light chain	PRINTS	PR00381	KINESINLIGHT	coord: 18..38 score: 58.57 coord: 53..74 score: 36.82
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 20..53 e-value: 0.039 score: 23.1 coord: 62..95 e-value: 0.17 score: 21.0
None	No IPR available	PFAM	PF13424	TPR_12	coord: 24..93 e-value: 2.2E-19 score: 69.5
None	No IPR available	PANTHER	PTHR45783	FAMILY NOT NAMED	coord: 3..97
None	No IPR available	PANTHER	PTHR45783:SF3	KINESIN LIGHT CHAIN	coord: 3..97
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 1..97 e-value: 1.3E-36 score: 128.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 1..92
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 20..95 score: 9.934

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig10933	contig	Ecto-sp8_S_contig10933:2082..3001 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig10933.1305.1	mRNA_Ecto-sp8_S_contig10933.1305.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig10933 2081..3001 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig10933.1305.1 ID=prot_Ecto-sp8_S_contig10933.1305.1|Name=mRNA_Ecto-sp8_S_contig10933.1305.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=97bp
YERSQAIREKVLGPEHPDVAQSLNNRAGLLESQGKYSEAEPLYERCQAIE
EKVLGPEHPSLATTLNNRARLLIAQEKHTEALPLLERALRIRTNKLG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002151	Kinesin_light
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom