prot_Ecto-sp8_S_contig10746.1122.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10746.1122.1
Unique Nameprot_Ecto-sp8_S_contig10746.1122.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length62
Homology
BLAST of mRNA_Ecto-sp8_S_contig10746.1122.1 vs. uniprot
Match: A0A6H5LKE0_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKE0_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 3.970e-40
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
Query:    1 DDGKVFDCVICGQVGNLLCCDNCPRAYHPRCVGGKQGIDSVNWSCWECLIEDSARDGVRVPR 62
            DDGKVFDCVICGQVGNLLCCDNCPRAYHPRCVGGKQGIDSVNWSCWECLIEDSARDGVRVPR
Sbjct: 2075 DDGKVFDCVICGQVGNLLCCDNCPRAYHPRCVGGKQGIDSVNWSCWECLIEDSARDGVRVPR 2136          
BLAST of mRNA_Ecto-sp8_S_contig10746.1122.1 vs. uniprot
Match: D7FZH6_ECTSI (WD repeat domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH6_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 3.970e-40
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
Query:    1 DDGKVFDCVICGQVGNLLCCDNCPRAYHPRCVGGKQGIDSVNWSCWECLIEDSARDGVRVPR 62
            DDGKVFDCVICGQVGNLLCCDNCPRAYHPRCVGGKQGIDSVNWSCWECLIEDSARDGVRVPR
Sbjct: 1675 DDGKVFDCVICGQVGNLLCCDNCPRAYHPRCVGGKQGIDSVNWSCWECLIEDSARDGVRVPR 1736          
BLAST of mRNA_Ecto-sp8_S_contig10746.1122.1 vs. uniprot
Match: A0A2K3DS27_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DS27_CHLRE)

HSP 1 Score: 72.8 bits (177), Expect = 1.690e-13
Identity = 31/63 (49.21%), Postives = 38/63 (60.32%), Query Frame = 0
Query:    1 DDGKVFDCVICGQVGNLLCCDNCPRAYHPRCVGGK-QGIDSVNWSCWECLIEDSARD-GVRVP 61
            DDG   +CV+CGQ GNLLCCD CP AYH RC+G   + +    W C EC +       G+RVP
Sbjct:  777 DDGNTENCVLCGQGGNLLCCDRCPAAYHMRCIGETTRSVPEGEWRCPECAVGGRGEAAGLRVP 839          
BLAST of mRNA_Ecto-sp8_S_contig10746.1122.1 vs. uniprot
Match: A0A8J6C1P9_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J6C1P9_ZIZPA)

HSP 1 Score: 68.2 bits (165), Expect = 7.140e-12
Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    1 DDGKVFDCVICGQVGNLLCCDNCPRAYHPRCVGGKQGI-DSVNWSCWECLIEDSARDGVR 59
            +DG   +C +CG VGNLLCCD CP A+H +CVG  + +    +W C ECLI+ +  DG R
Sbjct:  418 EDGNSDECYLCGMVGNLLCCDGCPAAFHSKCVGVVEDLLPEGDWFCPECLIQKN--DGSR 475          
BLAST of mRNA_Ecto-sp8_S_contig10746.1122.1 vs. uniprot
Match: A0A3S3N9T3_9MAGN (Zinc finger protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3N9T3_9MAGN)

HSP 1 Score: 67.4 bits (163), Expect = 1.330e-11
Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 0
Query:    1 DDGKVFDCVICGQVGNLLCCDNCPRAYHPRCVG-GKQGIDSVNWSCWECLI 50
            DDG   +C +CG  G LLCCD CP AYHPRC+G  K  I    W C EC +
Sbjct:  370 DDGNGDECKLCGMDGTLLCCDGCPYAYHPRCIGLTKASIPEGQWFCPECSV 420          
BLAST of mRNA_Ecto-sp8_S_contig10746.1122.1 vs. uniprot
Match: A0A833VV96_9POAL (Increased DNA methylation 1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VV96_9POAL)

HSP 1 Score: 63.5 bits (153), Expect = 3.030e-10
Identity = 20/51 (39.22%), Postives = 29/51 (56.86%), Query Frame = 0
Query:    1 DDGKVFDCVICGQVGNLLCCDNCPRAYHPRCVGGKQGIDSVNWSCWECLIE 51
            +D     C +CG  G LLCCD CP  YHP C+  ++ +   +W CW C+ +
Sbjct:  853 EDQNDDTCALCGDGGELLCCDRCPSTYHPTCLPSQEELPEGSWYCWHCICQ 903          
BLAST of mRNA_Ecto-sp8_S_contig10746.1122.1 vs. uniprot
Match: A0A2C9UJH1_MANES (PHD-type domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9UJH1_MANES)

HSP 1 Score: 61.2 bits (147), Expect = 1.950e-9
Identity = 24/49 (48.98%), Postives = 30/49 (61.22%), Query Frame = 0
Query:    1 DDGKVFDCVICGQVGNLLCCDNCPRAYHPRCVGGK-QGIDSVNWSCWEC 48
            DDG  ++CVIC   G+LLCCD CP  YH +C+    + I S NW C  C
Sbjct:   51 DDGHYYECVICDNGGDLLCCDTCPCTYHLQCLNPPLESIPSGNWQCENC 99          
BLAST of mRNA_Ecto-sp8_S_contig10746.1122.1 vs. uniprot
Match: A0A3N6SBZ8_BRACR (Uncharacterized protein n=1 Tax=Brassica cretica TaxID=69181 RepID=A0A3N6SBZ8_BRACR)

HSP 1 Score: 60.8 bits (146), Expect = 2.690e-9
Identity = 26/50 (52.00%), Postives = 29/50 (58.00%), Query Frame = 0
Query:    2 DGKVFDCVICGQVGNLLCCDNCPRAYHPRCVGG-KQGIDSVNWSCWECLI 50
            DG   +C +CG  G LLCCD CP AYH RC+G  K  I    W C EC I
Sbjct:  404 DGNSDECRLCGMDGTLLCCDECPLAYHSRCIGVLKMYIPDGPWYCPECTI 453          
BLAST of mRNA_Ecto-sp8_S_contig10746.1122.1 vs. uniprot
Match: A0A7S3PI96_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PI96_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 9.220e-9
Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 0
Query:    8 CVICGQVGNLLCCDNCPRAYHPRCVGGKQGIDSVNWSCWECLIEDSARD 56
            C ICG +G LLCCD+CP+ YH +C+G     ++  W+C ECL  D A+D
Sbjct:  184 CHICGLLGELLCCDSCPKVYHLKCLGLDAMPETEIWNCPECL--DKAKD 230          
BLAST of mRNA_Ecto-sp8_S_contig10746.1122.1 vs. uniprot
Match: A0A0L0DWD5_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DWD5_THETB)

HSP 1 Score: 59.3 bits (142), Expect = 9.360e-9
Identity = 21/42 (50.00%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    8 CVICGQVGNLLCCDNCPRAYHPRCVGGKQG-IDSVNWSCWEC 48
            C +C  +G+L+CCD+CPR YH  CVG +   ID+  W C EC
Sbjct:  535 CAVCSDIGDLICCDSCPRVYHADCVGSRAPPIDAAVWHCPEC 576          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10746.1122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LKE0_9PHAE3.970e-40100.00PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
D7FZH6_ECTSI3.970e-40100.00WD repeat domain-containing protein, putative n=1 ... [more]
A0A2K3DS27_CHLRE1.690e-1349.21Uncharacterized protein n=1 Tax=Chlamydomonas rein... [more]
A0A8J6C1P9_ZIZPA7.140e-1248.33Uncharacterized protein n=1 Tax=Zizania palustris ... [more]
A0A3S3N9T3_9MAGN1.330e-1152.94Zinc finger protein n=1 Tax=Cinnamomum micranthum ... [more]
A0A833VV96_9POAL3.030e-1039.22Increased DNA methylation 1 n=1 Tax=Carex littleda... [more]
A0A2C9UJH1_MANES1.950e-948.98PHD-type domain-containing protein n=1 Tax=Manihot... [more]
A0A3N6SBZ8_BRACR2.690e-952.00Uncharacterized protein n=1 Tax=Brassica cretica T... [more]
A0A7S3PI96_9STRA9.220e-948.98Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A0L0DWD5_THETB9.360e-950.00Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 7..49
e-value: 4.8E-8
score: 42.7
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 8..49
e-value: 2.7E-7
score: 30.4
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 5..51
score: 9.054
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 3..57
e-value: 1.5E-12
score: 48.9
NoneNo IPR availablePANTHERPTHR46508FAMILY NOT NAMEDcoord: 2..52
NoneNo IPR availablePANTHERPTHR46508:SF1PHD FINGER FAMILY PROTEINcoord: 2..52
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 8..48
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 4..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10746contigEcto-sp8_S_contig10746:840..1025 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10746.1122.1mRNA_Ecto-sp8_S_contig10746.1122.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10746 840..1025 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10746.1122.1 ID=prot_Ecto-sp8_S_contig10746.1122.1|Name=mRNA_Ecto-sp8_S_contig10746.1122.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=62bp
DDGKVFDCVICGQVGNLLCCDNCPRAYHPRCVGGKQGIDSVNWSCWECLI
EDSARDGVRVPR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD