prot_Ecto-sp8_S_contig10452.719.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10452.719.1
Unique Nameprot_Ecto-sp8_S_contig10452.719.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length162
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10452.719.1 vs. uniprot
Match: A0A6H5JNP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP0_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 6.060e-79
Identity = 144/161 (89.44%), Postives = 145/161 (90.06%), Query Frame = 0 
Query:    1 MAVSGAVRALVFALLVMFAVEAFVVPAPAALARNLGRPSNKQQLTPTPNTAATSSRSLTPARMSTYEQSSPEPXXXXXXXXXSEMELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQEKVVNTQKDAVQLGWSYDASKPEW 161
            MAVSGAVRALVFALLV FAVEAFVVPAPAALARNLGRPSN QQLTPTPNTAATSSRSLT A            XXXXXXXXX EMELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQE+VVNTQKDAVQLGWSYDASKPEW
Sbjct:    1 MAVSGAVRALVFALLVAFAVEAFVVPAPAALARNLGRPSNTQQLTPTPNTAATSSRSLTRAXXXXXXXXXXXXXXXXXXXXXPEMELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQERVVNTQKDAVQLGWSYDASKPEW 161
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BLAST of mRNA_Ecto-sp8_S_contig10452.719.1 vs. uniprot
Match: D8LID7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID7_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 2.180e-54
Identity = 90/99 (90.91%), Postives = 90/99 (90.91%), Query Frame = 0 
Query:   63 MSTYEQSSPEPXXXXXXXXXSEMELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQEKVVNTQKDAVQLGWSYDASKPEW 161
            MSTYEQSSPEP         SEMELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQEKVVNTQKDAVQLGWSYDASKPEW
Sbjct:    1 MSTYEQSSPEPSASGEMSSSSEMELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQEKVVNTQKDAVQLGWSYDASKPEW 99
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10452.719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNP0_9PHAE6.060e-7989.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LID7_ECTSI2.180e-5490.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021375Protein of unknown function DUF2997PFAMPF11211DUF2997coord: 95..136
e-value: 1.7E-12
score: 46.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..161
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.838
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10452contigEcto-sp8_S_contig10452:1666..3721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10452.719.1mRNA_Ecto-sp8_S_contig10452.719.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10452 1666..3721 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10452.719.1 ID=prot_Ecto-sp8_S_contig10452.719.1|Name=mRNA_Ecto-sp8_S_contig10452.719.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=162bp
MAVSGAVRALVFALLVMFAVEAFVVPAPAALARNLGRPSNKQQLTPTPNT
AATSSRSLTPARMSTYEQSSPEPSASGEMSSSSEMELQELIVDFTDDGRI
LLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQEKVVNTQKDAVQL
GWSYDASKPEW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021375DUF2997