mRNA_Ecto-sp8_S_contig103978.641.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig103978.641.1 vs. uniprot
Match: D7FV78_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV78_ECTSI) HSP 1 Score: 144 bits (363), Expect = 4.400e-41 Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1
Query: 1 NLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMS 207
NLLTPEVPF+LDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMS
Sbjct: 215 NLLTPEVPFSLDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMS 283
BLAST of mRNA_Ecto-sp8_S_contig103978.641.1 vs. uniprot
Match: A0A836CEB8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB8_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.640e-25 Identity = 43/69 (62.32%), Postives = 57/69 (82.61%), Query Frame = 1
Query: 1 NLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMS 207
+LLTP +PFALDY EV FSLC+++C++Y K +EEECY N V++ LVKVD K+K H++NV AKEFT+MS
Sbjct: 145 HLLTPPLPFALDYFEVFFSLCDIICQVYNKLMEEECYSNVHVFEALVKVDAKVKRHVLNVTAKEFTEMS 213
BLAST of mRNA_Ecto-sp8_S_contig103978.641.1 vs. uniprot
Match: A0A7S2CN58_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CN58_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 4.710e-21 Identity = 40/69 (57.97%), Postives = 55/69 (79.71%), Query Frame = 1
Query: 1 NLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMS 207
+L TP V F LDY EV+FSLC+V+ +Y KFV+EE ++N+ V+D LVK D++IKHH+IN+ AKE TD+S
Sbjct: 73 HLQTPHVAFELDYREVLFSLCDVLSLLYNKFVDEEIWQNSAVFDMLVKADSRIKHHVINLLAKELTDLS 141
BLAST of mRNA_Ecto-sp8_S_contig103978.641.1 vs. uniprot
Match: A0A7S2GL83_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GL83_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.450e-19 Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 1 NLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMS 207
+L+TP VPF +DY+EV+ SLC+V+ +Y K V E +++ VYD LV+VD++IKHHIIN AKE TD+S
Sbjct: 15 HLVTPHVPFPIDYVEVIHSLCDVLVLVYHKLVHCESWQSPAVYDMLVRVDSRIKHHIINRIAKELTDLS 83
BLAST of mRNA_Ecto-sp8_S_contig103978.641.1 vs. uniprot
Match: A0A7S3MFY2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFY2_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.420e-16 Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 1 NLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTD 201
+L P +PF LDYLEV LC + ++Y K + EECY N +YD +V++D ++KHHIIN+ +KE TD
Sbjct: 182 HLRLPHIPFELDYLEVFTGLCVELSKLYEKLIHEECYANQIIYDTIVRLDTRVKHHIINLVSKEVTD 248
BLAST of mRNA_Ecto-sp8_S_contig103978.641.1 vs. uniprot
Match: A0A8K1C382_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C382_PYTOL) HSP 1 Score: 70.5 bits (171), Expect = 1.390e-12 Identity = 31/67 (46.27%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 1 NLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEE-CYKNAFVYDGLVKVDNKIKHHIINVFAKEFT 198
LLTP +PF LDY EV+ SLC+++ +Y+KFVE+ C +N F++ +V+ D KIK +I+ KEF+
Sbjct: 320 RLLTPSIPFPLDYREVMLSLCDILALVYSKFVEDNICSENIFLFQAIVRFDEKIKKLVIDPVKKEFS 386
BLAST of mRNA_Ecto-sp8_S_contig103978.641.1 vs. uniprot
Match: A0A7R9Y7M0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y7M0_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.190e-11 Identity = 24/59 (40.68%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 1 NLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIIN 177
L P++ +DY E++ SLCE + +Y KF+E +CY NA ++D L+++D K+K H++N
Sbjct: 200 RLCLPQLSIEIDYFELIISLCETLTLLYKKFLESDCYSNALLFDALMRMDAKVKQHLVN 258
BLAST of mRNA_Ecto-sp8_S_contig103978.641.1 vs. uniprot
Match: A0A1V9ZQC0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQC0_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.710e-11 Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 1
Query: 1 NLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMS 207
LLTP + F LDY ++V S CEV+ IYAKF+++ C +N FV+ +++ D KIK ++ +K+ +S
Sbjct: 349 RLLTPNISFPLDYNQLVVSACEVLTHIYAKFMDDACSRNQFVFQAVLRFDEKIKKSLLEAISKQLAAIS 417
BLAST of mRNA_Ecto-sp8_S_contig103978.641.1 vs. uniprot
Match: A0A485KZ76_9STRA (Aste57867_13517 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZ76_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 2.910e-10 Identity = 27/69 (39.13%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 1 NLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMS 207
L+TP VPF L+Y +VV SLCEV+ +Y + V++ C N V+ L++ D KIK + +K+ T ++
Sbjct: 165 RLVTPNVPFPLEYCQVVVSLCEVLTLVYGRVVDDVCSSNPCVFQALLRFDEKIKKFFLESISKQLTTIA 233
BLAST of mRNA_Ecto-sp8_S_contig103978.641.1 vs. uniprot
Match: A0A4D9CUK2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUK2_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.010e-9 Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 1 NLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECY---KNAFVYDGLVKVDNKIKHHIINVFAKEFTDMS 207
N P +PF LDYLEV+ SLC + +Y + ++A +++ LVK+D K+KHHIIN AKE T ++
Sbjct: 201 NFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGHRHAASLERDAALFEVLVKIDAKVKHHIINPIAKELTSLA 272 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig103978.641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig103978.641.1 >prot_Ecto-sp8_S_contig103978.641.1 ID=prot_Ecto-sp8_S_contig103978.641.1|Name=mRNA_Ecto-sp8_S_contig103978.641.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=69bp NLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDback to top mRNA from alignment at Ecto-sp8_S_contig103978:2..522+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig103978.641.1 ID=mRNA_Ecto-sp8_S_contig103978.641.1|Name=mRNA_Ecto-sp8_S_contig103978.641.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=521bp|location=Sequence derived from alignment at Ecto-sp8_S_contig103978:2..522+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig103978:2..522+ >mRNA_Ecto-sp8_S_contig103978.641.1 ID=mRNA_Ecto-sp8_S_contig103978.641.1|Name=mRNA_Ecto-sp8_S_contig103978.641.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=207bp|location=Sequence derived from alignment at Ecto-sp8_S_contig103978:2..522+ (Ectocarpus species8 EcLAC_412)back to top |