prot_Ecto-sp8_S_contig9977.31857.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9977.31857.1
Unique Nameprot_Ecto-sp8_S_contig9977.31857.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length167
Homology
BLAST of mRNA_Ecto-sp8_S_contig9977.31857.1 vs. uniprot
Match: D7FU52_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU52_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 3.570e-44
Identity = 94/140 (67.14%), Postives = 108/140 (77.14%), Query Frame = 0
Query:   27 LSKTKDKQLSI-DTHSETSRRMNKFMMVAFGLAVIRQTVFSPAAGSTSGAVSAEELAGFAERFARSCLLARSSDESEALLSWPAVSAGAARAACLGGWSCAAGDVLDEGTFFLLELGWKTLINLIILRSLRFLALRFQGP 165
            LSK K  QLS  D+ SE SRRMN F++VAFG A+I+Q + S     T GAVSA + A FAE  ARSCLLA+ SD+SEA+L WPA+SAGAARA CLG  SCAAG +LDEGT FL E+G KT+INLIILRSLRFLA RFQGP
Sbjct:    2 LSKKKGNQLSTRDSPSEISRRMNNFIVVAFGAALIQQ-LLSLLTTDTPGAVSAGDAADFAESSARSCLLAQPSDQSEAVLPWPAISAGAARAVCLG-LSCAAGGMLDEGTLFLFEVGLKTIINLIILRSLRFLAPRFQGP 139          
BLAST of mRNA_Ecto-sp8_S_contig9977.31857.1 vs. uniprot
Match: A0A6H5K6L0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L0_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 6.660e-40
Identity = 81/120 (67.50%), Postives = 91/120 (75.83%), Query Frame = 0
Query:   47 MNKFMMVAFGLAVIRQTVFSPAAGSTSGAVSAEELAGFAERFARSCLLARSSDESEALLSWPAVSAGAARAACLGGWSCAAGDVLDEGTFFLLELGWKTLINLIILRSLRFLALRFQGPF 166
            MNK  MVAFGLA + Q + S     T GA +A++ AGFAE    SCLLA+SSDESEALLSWPA+SAGAA AACLGG SCAAG +LDE T FL E+G KT+INLIILRS  FL  RFQGPF
Sbjct:    1 MNKLTMVAFGLA-LAQKLLSSLTTDTPGAATADDAAGFAESLTWSCLLAQSSDESEALLSWPALSAGAASAACLGGLSCAAGGMLDEATLFLFEVGLKTIINLIILRSPSFLTPRFQGPF 119          
BLAST of mRNA_Ecto-sp8_S_contig9977.31857.1 vs. uniprot
Match: A0A6H5JFL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL5_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 6.660e-40
Identity = 80/119 (67.23%), Postives = 93/119 (78.15%), Query Frame = 0
Query:   47 MNKFMMVAFGLAVIRQTVFSPAAGSTSGAVSAEELAGFAERFARSCLLARSSDESEALLSWPAVSAGAARAACLGGWSCAAGDVLDEGTFFLLELGWKTLINLIILRSLRFLALRFQGP 165
            MN+ +MVAFG+AVI+Q + S     T GAVSAE+ A FAE FARSCLL +  D+SEAL+ WPAVSAGAARAACL G SC AG +LD+GT FL E+G KT INLII+RSLRFLA  FQGP
Sbjct:    1 MNELIMVAFGVAVIQQ-LLSSLTTDTPGAVSAEDAADFAESFARSCLLPQPPDQSEALVPWPAVSAGAARAACLVGLSCVAGGMLDKGTLFLFEVGLKTFINLIIIRSLRFLASMFQGP 118          
BLAST of mRNA_Ecto-sp8_S_contig9977.31857.1 vs. uniprot
Match: D7G967_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G967_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 1.330e-35
Identity = 71/78 (91.03%), Postives = 74/78 (94.87%), Query Frame = 0
Query:   44 SRRMNKFMMVAFGLAVIRQTVFSPAAGSTSGAVSAEELAGFAERFARSCLLARSSDESEALLSWPAVSAGAARAACLG 121
            SRRMNKFMMVA GLAVI++  FSPAAGSTSGAVS EELAGFAERFARSCLLARSS+ESEALLSWPAVSAGAARAACLG
Sbjct:    2 SRRMNKFMMVAIGLAVIQRAFFSPAAGSTSGAVSGEELAGFAERFARSCLLARSSEESEALLSWPAVSAGAARAACLG 79          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9977.31857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FU52_ECTSI3.570e-4467.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6L0_9PHAE6.660e-4067.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFL5_9PHAE6.660e-4067.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G967_ECTSI1.330e-3591.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9977contigEcto-sp8_S_contig9977:1793..6882 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9977.31857.1mRNA_Ecto-sp8_S_contig9977.31857.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9977 1793..6882 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9977.31857.1 ID=prot_Ecto-sp8_S_contig9977.31857.1|Name=mRNA_Ecto-sp8_S_contig9977.31857.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=167bp
RDQISIVREGEHVRKEEKPSVTTSLPLSKTKDKQLSIDTHSETSRRMNKF
MMVAFGLAVIRQTVFSPAAGSTSGAVSAEELAGFAERFARSCLLARSSDE
SEALLSWPAVSAGAARAACLGGWSCAAGDVLDEGTFFLLELGWKTLINLI
ILRSLRFLALRFQGPF*
back to top