prot_Ecto-sp8_S_contig99134.31769.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig99134.31769.1
Unique Nameprot_Ecto-sp8_S_contig99134.31769.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length154
Homology
BLAST of mRNA_Ecto-sp8_S_contig99134.31769.1 vs. uniprot
Match: UPI000C782EA2 (eukaryotic translation initiation factor 1A, X-chromosomal-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C782EA2)

HSP 1 Score: 255 bits (652), Expect = 2.700e-85
Identity = 129/132 (97.73%), Postives = 131/132 (99.24%), Query Frame = 0
Query:    1 MPKNKGKGGKNRRRGKNENEGLKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINHSDIVLLGLRDYQDAKADVILKYSADEARNLKSYGEFPESVKINETVDFVGGDLDDDIEF 132
            MPKNKGKGGKNRRRGKNENEGLKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWIN SDIVL+GLRDYQDAKADVILKYSADEARNLKSYGEFPESVKINETVDFVGGD+DDDIEF
Sbjct:    1 MPKNKGKGGKNRRRGKNENEGLKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINQSDIVLIGLRDYQDAKADVILKYSADEARNLKSYGEFPESVKINETVDFVGGDMDDDIEF 132          
BLAST of mRNA_Ecto-sp8_S_contig99134.31769.1 vs. uniprot
Match: C1BTM3_LEPSM (Eukaryotic translation initiation factor 4C n=5 Tax=Caligidae TaxID=72034 RepID=C1BTM3_LEPSM)

HSP 1 Score: 237 bits (605), Expect = 3.320e-78
Identity = 128/156 (82.05%), Postives = 137/156 (87.82%), Query Frame = 0
Query:    1 MPKNKGKGGKNRRRGKNENEGLKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINHSDIVLLGLRDYQDAKADVILKYSADEARNLKSYGEFPESVKINETVDFVGGDLDDDIEF---GSDCDSDDSGSGDDANDIDGI 153
            MPKNKGKGGKNRRRGKNENEGLKRELVF+EDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWIN SDI+L+GLRDYQDAKADVILKYSADEARNLKSYGEFPE+VKINETV F    +DD+IEF   GS        S ++ N+IDGI
Sbjct:    1 MPKNKGKGGKNRRRGKNENEGLKRELVFREDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINQSDIILVGLRDYQDAKADVILKYSADEARNLKSYGEFPETVKINETVTFGEEGIDDEIEFDVVGS--------SEEETNEIDGI 148          
BLAST of mRNA_Ecto-sp8_S_contig99134.31769.1 vs. uniprot
Match: E9H4Z9_DAPPU (Eukaryotic translation initiation factor 4C n=2 Tax=Daphnia TaxID=6668 RepID=E9H4Z9_DAPPU)

HSP 1 Score: 235 bits (599), Expect = 2.640e-77
Identity = 124/152 (81.58%), Postives = 134/152 (88.16%), Query Frame = 0
Query:    1 MPKNKGKGGKNRRRGKNENEGLKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINHSDIVLLGLRDYQDAKADVILKYSADEARNLKSYGEFPESVKINETVDFVGGDLDDDIEFGSDCDSDDSGSG--DDANDI 150
            MPKNKGKGGKNRRRGKNENE  KREL+FKEDGQEYAQVTKMLGNGRLEA+CFDG KRLCHIRGKLRKKVWIN  DI+L+GLRDYQDAKADVILKY+ADEARNLK+YGE PE+VK+ +TV+FV   LDDDIEFG     DDSGSG  DD NDI
Sbjct:    1 MPKNKGKGGKNRRRGKNENEAEKRELIFKEDGQEYAQVTKMLGNGRLEALCFDGTKRLCHIRGKLRKKVWINQGDIILVGLRDYQDAKADVILKYNADEARNLKTYGEIPETVKVTDTVNFVDDGLDDDIEFG-----DDSGSGEDDDINDI 147          
BLAST of mRNA_Ecto-sp8_S_contig99134.31769.1 vs. uniprot
Match: Q9VEA1_DROME (Eukaryotic translation initiation factor 4C n=48 Tax=Dicondylia TaxID=85512 RepID=Q9VEA1_DROME)

HSP 1 Score: 229 bits (584), Expect = 5.260e-75
Identity = 120/153 (78.43%), Postives = 132/153 (86.27%), Query Frame = 0
Query:    1 MPKNKGKGGKNRRRGKNENEGLKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINHSDIVLLGLRDYQDAKADVILKYSADEARNLKSYGEFPESVKINETVDFVGGDLDDDIEFGSDCDSDDSGSGDDANDIDGI 153
            MPKNKGKGGKNRRRGKNENE  KREL+FKED QEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWIN  DI+L+GLRDYQD+KADVILKY+ DEARNLK+YGEFPESV+INETV FV    D+DIEFG +  S+D     DA+ +D I
Sbjct:    1 MPKNKGKGGKNRRRGKNENEFEKRELIFKEDQQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINQGDIILVGLRDYQDSKADVILKYTPDEARNLKTYGEFPESVRINETVTFVEDGFDEDIEFGDEISSED-----DADSVDNI 148          
BLAST of mRNA_Ecto-sp8_S_contig99134.31769.1 vs. uniprot
Match: Q9NJB4_DROME (Eukaryotic translation initiation factor 4C n=81 Tax=cellular organisms TaxID=131567 RepID=Q9NJB4_DROME)

HSP 1 Score: 228 bits (580), Expect = 2.140e-74
Identity = 119/153 (77.78%), Postives = 132/153 (86.27%), Query Frame = 0
Query:    1 MPKNKGKGGKNRRRGKNENEGLKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINHSDIVLLGLRDYQDAKADVILKYSADEARNLKSYGEFPESVKINETVDFVGGDLDDDIEFGSDCDSDDSGSGDDANDIDGI 153
            MPKNKGKGGKNRRRGKNENE  KREL+FKED QEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWIN  +I+L+GLRDYQD+KADVILKY+ DEARNLK+YGEFPESV+INETV FV    D+DIEFG +  S+D     DA+ +D I
Sbjct:    1 MPKNKGKGGKNRRRGKNENEFEKRELIFKEDQQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINQGEIILVGLRDYQDSKADVILKYTPDEARNLKTYGEFPESVRINETVTFVEDGFDEDIEFGDEISSED-----DADSVDNI 148          
BLAST of mRNA_Ecto-sp8_S_contig99134.31769.1 vs. uniprot
Match: A0A833RXT6_9HYME (Eukaryotic translation initiation factor 4C n=3 Tax=Neoptera TaxID=33340 RepID=A0A833RXT6_9HYME)

HSP 1 Score: 223 bits (568), Expect = 2.370e-72
Identity = 115/148 (77.70%), Postives = 128/148 (86.49%), Query Frame = 0
Query:    6 GKGGKNRRRGKNENEGLKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINHSDIVLLGLRDYQDAKADVILKYSADEARNLKSYGEFPESVKINETVDFVGGDLDDDIEFGSDCDSDDSGSGDDANDIDGI 153
            GKGGKNRRRGKNENE  KRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWIN  DI+L+GLRDYQDAKADVILKY++DEARNLK+YGEFPE+V+IN+TV FV    D+DIEFG +       S DD +D+D +
Sbjct:   13 GKGGKNRRRGKNENETEKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTSDEARNLKTYGEFPETVRINDTVTFVEDGFDEDIEFGDEI------SDDDEDDVDNV 154          
BLAST of mRNA_Ecto-sp8_S_contig99134.31769.1 vs. uniprot
Match: A0A6J2YDM2_SITOR (Eukaryotic translation initiation factor 4C n=31 Tax=Pterygota TaxID=7496 RepID=A0A6J2YDM2_SITOR)

HSP 1 Score: 218 bits (556), Expect = 9.700e-71
Identity = 117/153 (76.47%), Postives = 126/153 (82.35%), Query Frame = 0
Query:    1 MPKNKGKGGKNRRRGKNENEGLKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINHSDIVLLGLRDYQDAKADVILKYSADEARNLKSYGEFPESVKINETVDFVGGDLDDDIEFGSDCDSDDSGSGDDANDIDGI 153
            MPKNKGKGGKN           KREL+FKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWIN  DI+L+GLRDYQDAKADVILKY+ DEARNLK+YGEFPESV+INETV FV    D+DIEFG     DD  SGDDA+ +DGI
Sbjct:    1 MPKNKGKGGKNXXXXXXXXXTEKRELIFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPESVRINETVTFVEDGFDEDIEFG-----DDISSGDDADPVDGI 148          
BLAST of mRNA_Ecto-sp8_S_contig99134.31769.1 vs. uniprot
Match: J3JTV9_DENPD (Eukaryotic translation initiation factor 4C n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=J3JTV9_DENPD)

HSP 1 Score: 218 bits (556), Expect = 9.700e-71
Identity = 117/153 (76.47%), Postives = 127/153 (83.01%), Query Frame = 0
Query:    1 MPKNKGKGGKNRRRGKNENEGLKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINHSDIVLLGLRDYQDAKADVILKYSADEARNLKSYGEFPESVKINETVDFVGGDLDDDIEFGSDCDSDDSGSGDDANDIDGI 153
            MPKNKGKGGKN           KREL+FKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWIN  DI+L+GLRDYQDAKADVILKY+ DEARNLK+YGEFPESVKI++ V FV  DLD+DIEFG     DD  SGDDA+ +DGI
Sbjct:    1 MPKNKGKGGKNXXXXXXXXXTEKRELIFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPESVKISDYVTFVENDLDEDIEFG-----DDVSSGDDADPVDGI 148          
BLAST of mRNA_Ecto-sp8_S_contig99134.31769.1 vs. uniprot
Match: UPI000BA7FC93 (eukaryotic translation initiation factor 1A, Y-chromosomal-like isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA7FC93)

HSP 1 Score: 217 bits (553), Expect = 2.970e-70
Identity = 111/139 (79.86%), Postives = 120/139 (86.33%), Query Frame = 0
Query:    1 MPKNKGKGGKNRRRGKNENEGLKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINHSDIVLLGLRDYQDAKADVILKYSADEARNLKSYGEFPESVKINETVDFVGGDLDDDIEFGSDCDSD 139
            MPKNKGKGGKNRRRGKNENE  KRELVFK+DGQEYAQV KMLGNGRLEA+CFDGVKRLCHIRGKLRKKVWIN  DI+L+GLRDYQDAKADVILKY+ DEARNLKSYGE PE  KIN+TV F   ++DD I+F  D   D
Sbjct:    1 MPKNKGKGGKNRRRGKNENEADKRELVFKDDGQEYAQVVKMLGNGRLEAICFDGVKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYNPDEARNLKSYGELPEHAKINDTVTFGEEEVDDIIDFNDDVSED 139          
BLAST of mRNA_Ecto-sp8_S_contig99134.31769.1 vs. uniprot
Match: A0A836G436_9HYME (28S ribosomal protein S31, mitochondrial (Fragment) n=1 Tax=Acromyrmex heyeri TaxID=230685 RepID=A0A836G436_9HYME)

HSP 1 Score: 223 bits (568), Expect = 1.260e-69
Identity = 115/148 (77.70%), Postives = 128/148 (86.49%), Query Frame = 0
Query:    6 GKGGKNRRRGKNENEGLKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINHSDIVLLGLRDYQDAKADVILKYSADEARNLKSYGEFPESVKINETVDFVGGDLDDDIEFGSDCDSDDSGSGDDANDIDGI 153
            GKGGKNRRRGKNENE  KRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWIN  DI+L+GLRDYQDAKADVILKY++DEARNLK+YGEFPE+V+IN+TV FV    D+DIEFG +       S DD +D+D +
Sbjct:  203 GKGGKNRRRGKNENETEKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTSDEARNLKTYGEFPETVRINDTVTFVEDGFDEDIEFGDEI------SDDDEDDVDNV 344          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig99134.31769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C782EA22.700e-8597.73eukaryotic translation initiation factor 1A, X-chr... [more]
C1BTM3_LEPSM3.320e-7882.05Eukaryotic translation initiation factor 4C n=5 Ta... [more]
E9H4Z9_DAPPU2.640e-7781.58Eukaryotic translation initiation factor 4C n=2 Ta... [more]
Q9VEA1_DROME5.260e-7578.43Eukaryotic translation initiation factor 4C n=48 T... [more]
Q9NJB4_DROME2.140e-7477.78Eukaryotic translation initiation factor 4C n=81 T... [more]
A0A833RXT6_9HYME2.370e-7277.70Eukaryotic translation initiation factor 4C n=3 Ta... [more]
A0A6J2YDM2_SITOR9.700e-7176.47Eukaryotic translation initiation factor 4C n=31 T... [more]
J3JTV9_DENPD9.700e-7176.47Eukaryotic translation initiation factor 4C n=1 Ta... [more]
UPI000BA7FC932.970e-7079.86eukaryotic translation initiation factor 1A, Y-chr... [more]
A0A836G436_9HYME1.260e-6977.7028S ribosomal protein S31, mitochondrial (Fragment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001253Translation initiation factor 1A (eIF-1A)SMARTSM00652eIF1neu4coord: 28..110
e-value: 4.4E-47
score: 172.4
IPR001253Translation initiation factor 1A (eIF-1A)TIGRFAMTIGR00523TIGR00523coord: 14..110
e-value: 1.2E-34
score: 116.2
IPR001253Translation initiation factor 1A (eIF-1A)PANTHERPTHR21668EIF-1Acoord: 1..140
IPR001253Translation initiation factor 1A (eIF-1A)HAMAPMF_00216aIF_1Acoord: 16..110
score: 18.701
IPR006196RNA-binding domain, S1, IF1 typePFAMPF01176eIF-1acoord: 32..93
e-value: 1.0E-20
score: 73.3
IPR006196RNA-binding domain, S1, IF1 typePROSITEPS50832S1_IF1_TYPEcoord: 22..96
score: 31.31
NoneNo IPR availableGENE3D2.40.50.140coord: 2..146
e-value: 1.7E-55
score: 188.4
NoneNo IPR availablePANTHERPTHR21668:SF4EUKARYOTIC TRANSLATION INITIATION FACTOR 1A, X-CHROMOSOMALcoord: 1..140
NoneNo IPR availablePRODOMPD005579coord: 53..104
e-value: 3.0E-20
score: 239.0
IPR018104Translation initiation factor 1A (eIF-1A), conserved sitePROSITEPS01262IF1Acoord: 41..63
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 2..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig99134contigEcto-sp8_S_contig99134:79..540 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig99134.31769.1mRNA_Ecto-sp8_S_contig99134.31769.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig99134 79..549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig99134.31769.1 ID=prot_Ecto-sp8_S_contig99134.31769.1|Name=mRNA_Ecto-sp8_S_contig99134.31769.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=154bp
MPKNKGKGGKNRRRGKNENEGLKRELVFKEDGQEYAQVTKMLGNGRLEAM
CFDGVKRLCHIRGKLRKKVWINHSDIVLLGLRDYQDAKADVILKYSADEA
RNLKSYGEFPESVKINETVDFVGGDLDDDIEFGSDCDSDDSGSGDDANDI
DGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001253TIF_eIF-1A
IPR006196RNA-binding_domain_S1_IF1
IPR018104TIF_eIF-1A_CS
IPR012340NA-bd_OB-fold