prot_Ecto-sp8_S_contig9911.31764.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9911.31764.1
Unique Nameprot_Ecto-sp8_S_contig9911.31764.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length119
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9911.31764.1 vs. uniprot
Match: D8LMM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMM4_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 2.280e-68
Identity = 106/122 (86.89%), Postives = 109/122 (89.34%), Query Frame = 0 
Query:    1 MDKKPHGATGGDDQDAPFEDPEDAVGFGARTLLQRLPSKTFCTA---ATGAWIKTKTCTIACSTRVGKDGTQPDILRAMHMHVLFIVLGANGFEGVMEVLGAWRLSVGPLPWIPLCSVARQR 119
            MDK PHGATGGDDQDAPFEDPEDAVGFGAR LLQRLP+KT+ TA   ATGAWIKTK CTIACSTRVGKDGTQPD L AMHMHVLF+ LG NGFEGVMEVLGA RLSVGPLP IPLCSVARQR
Sbjct:    1 MDKNPHGATGGDDQDAPFEDPEDAVGFGARRLLQRLPTKTYGTAGNQATGAWIKTKDCTIACSTRVGKDGTQPDTLHAMHMHVLFVALGVNGFEGVMEVLGAGRLSVGPLPLIPLCSVARQR 122
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BLAST of mRNA_Ecto-sp8_S_contig9911.31764.1 vs. uniprot
Match: D8LKZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ3_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 4.520e-19
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0 
Query:    1 MDKKPHGATGGDDQDAPFEDPEDAVGFGARTLLQRLPSKTFCTA 44
            MDK PHGATGGDDQDAPFEDPEDAVGFGAR LLQRLP+KT CTA
Sbjct:    1 MDKNPHGATGGDDQDAPFEDPEDAVGFGARRLLQRLPTKTCCTA 44
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9911.31764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMM4_ECTSI2.280e-6886.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LKZ3_ECTSI4.520e-1990.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9911contigEcto-sp8_S_contig9911:4134..5458 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9911.31764.1mRNA_Ecto-sp8_S_contig9911.31764.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9911 4134..5458 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9911.31764.1 ID=prot_Ecto-sp8_S_contig9911.31764.1|Name=mRNA_Ecto-sp8_S_contig9911.31764.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=119bp
MDKKPHGATGGDDQDAPFEDPEDAVGFGARTLLQRLPSKTFCTAATGAWI
KTKTCTIACSTRVGKDGTQPDILRAMHMHVLFIVLGANGFEGVMEVLGAW
RLSVGPLPWIPLCSVARQR
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