prot_Ecto-sp8_S_contig9814.31602.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9814.31602.1
Unique Nameprot_Ecto-sp8_S_contig9814.31602.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length98
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9814.31602.1 vs. uniprot
Match: D7FR79_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR79_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 3.070e-44
Identity = 91/97 (93.81%), Postives = 91/97 (93.81%), Query Frame = 0 
Query:    1 CPTTPPFLTSLLAAAADTSASTDTPSTAAATAARPVPRSPPATLRSGEGKGIDNSGERGEVLRLWRKRNENLTLEEMEWLVLWVRRTQSTRRQRQQQ 97
            CPTT P LTSLLA AADT ASTDTPSTAA TAARPVPRSPPATLRSG GKGIDNSGERGEVLRLWRKRNENLTLEEMEWLVLWVRRTQSTRRQRQQQ
Sbjct:  574 CPTTLPSLTSLLAGAADTCASTDTPSTAA-TAARPVPRSPPATLRSGGGKGIDNSGERGEVLRLWRKRNENLTLEEMEWLVLWVRRTQSTRRQRQQQ 669
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9814.31602.1 vs. uniprot
Match: A0A6H5JF78_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF78_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 1.390e-38
Identity = 85/100 (85.00%), Postives = 87/100 (87.00%), Query Frame = 0 
Query:    2 PTTPPFLTSLLAAAA----DTSASTDTPSTAAATAARPVPRSPPATLRSGEGKGIDNSGERGEVLRLWRKRNENLTLEEMEWLVLWVRRTQSTRRQRQQQ 97
            PT PP LTSLLAA A    DT A+TD PS AA TAARPVPRSPPATLRSGEG+G DNSGERGEVLRLWRKRNENLTLEEMEWLVLWVRR QSTRRQRQQQ
Sbjct:  695 PTAPPSLTSLLAATATATADTCATTDPPSVAA-TAARPVPRSPPATLRSGEGRGFDNSGERGEVLRLWRKRNENLTLEEMEWLVLWVRRMQSTRRQRQQQ 793
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9814.31602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR79_ECTSI3.070e-4493.81BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JF78_9PHAE1.390e-3885.00BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9814contigEcto-sp8_S_contig9814:1025..1770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9814.31602.1mRNA_Ecto-sp8_S_contig9814.31602.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9814 1025..3134 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9814.31602.1 ID=prot_Ecto-sp8_S_contig9814.31602.1|Name=mRNA_Ecto-sp8_S_contig9814.31602.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=98bp
CPTTPPFLTSLLAAAADTSASTDTPSTAAATAARPVPRSPPATLRSGEGK
GIDNSGERGEVLRLWRKRNENLTLEEMEWLVLWVRRTQSTRRQRQQQ*
back to top