prot_Ecto-sp8_S_contig9693.31403.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9693.31403.1
Unique Nameprot_Ecto-sp8_S_contig9693.31403.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length209
Homology
BLAST of mRNA_Ecto-sp8_S_contig9693.31403.1 vs. uniprot
Match: D8LNW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW7_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 7.590e-127
Identity = 179/209 (85.65%), Postives = 185/209 (88.52%), Query Frame = 0
Query:    1 MSMVYRQVEQAEPVDEARFNGEGGVRRQWWWQPGPVDSCCFCCSLRAGVGILAAKDLFYNGIWAAFYSRSDVEKMLRTAIAILQSAYDKDCKDAPVQTVDCLQLSHNIEQAEFQVELLDNLPVIVYVEAVIAMLAGAVGLFAVFKSNALSAKIYLWTWLPKFFVGLVGNYTVRAEMKQYGIDNGDGPGVVTGELVGVVFLLYFVKVGRS 209
            MSMVYRQVEQ EPVD ARFNGEGGVRRQWWWQPGPVDSCCFCCSLRAGVGILAA DLF NGIW+ FYSRS +EKML  AI ILQS YDKDCKDAPVQT DCLQLSHNIEQAEF+VEL DNLPVIVYVEA+IAMLAGAVGLFAVFKSNALSAKIYLW WLP+FFVGLV  YT+RA MKQYGIDN DGPGVV G LV VV  LYFVKV  S
Sbjct:    1 MSMVYRQVEQEEPVDGARFNGEGGVRRQWWWQPGPVDSCCFCCSLRAGVGILAANDLFLNGIWSTFYSRSHIEKMLHAAIEILQSVYDKDCKDAPVQTEDCLQLSHNIEQAEFEVELFDNLPVIVYVEAIIAMLAGAVGLFAVFKSNALSAKIYLWMWLPRFFVGLVAKYTLRAVMKQYGIDNSDGPGVVIGHLVDVVVFLYFVKVAWS 209          
BLAST of mRNA_Ecto-sp8_S_contig9693.31403.1 vs. uniprot
Match: A0A6H5JV23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV23_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 7.800e-91
Identity = 136/172 (79.07%), Postives = 149/172 (86.63%), Query Frame = 0
Query:   38 SCCFCCSLRAGVGILAAKDLFYNGIWAAFYSRSDVEKMLRTAIAILQSAYDKDCKDAPVQTVDCLQLSHNIEQAEFQVELLDNLPVIVYVEAVIAMLAGAVGLFAVFKSNALSAKIYLWTWLPKFFVGLVGNYTVRAEMKQYGIDNGDGPGVVTGELVGVVFLLYFVKVGRS 209
            +CCFCCSLRAGVGILAA DL + GIW AFY+R  VEKML+TAIAI+QS YD DCKDAPVQT DCL+ SH IEQ EFQVEL +NLPVIVYVEAVIAM+AGAVGLFAVFKSNALSAKIYLWTWLP+FFVGLV  YT+RAEMKQYGIDN + PGVV  ELV  +FLLY+VKV  S
Sbjct:   13 TCCFCCSLRAGVGILAANDLLHTGIWTAFYARGYVEKMLQTAIAIVQSLYDMDCKDAPVQTEDCLKRSHEIEQMEFQVELFENLPVIVYVEAVIAMIAGAVGLFAVFKSNALSAKIYLWTWLPRFFVGLVARYTMRAEMKQYGIDNNNEPGVVINELVTAIFLLYYVKVTWS 184          
BLAST of mRNA_Ecto-sp8_S_contig9693.31403.1 vs. uniprot
Match: D8LNW6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW6_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 2.360e-26
Identity = 73/197 (37.06%), Postives = 104/197 (52.79%), Query Frame = 0
Query:   15 DEARFNGEGGVRRQWWWQPGPVDSCCFCCSLRAGVGILAAKDLFYNGIWAAFY-SRSDVEKMLRTAIAILQSAYDKDCKDAPVQTVDCLQLSHNIEQAEFQVELLDNLPVIVYVEAVIAMLAGAVGLFAVFKSNALSAKIYLWTWLPKFFVGLVGNYTVRAEMKQYGIDNGDGPG-VVTGELVGVVFLLYFVKVGRS 209
            +  RFNG GGVR+ WWWQPGPVDS     SL AGV +LAA D+   G    +Y S    +  L+  +A  +  Y ++C+D    + DCL  +  I      +   ++L V   ++ VIA + G VGL AVF  +AL+A+ YLW+W P+  + LV     R   ++Y  D G   G  V   +  V+ L Y +KV  S
Sbjct:   26 ERVRFNGVGGVRKDWWWQPGPVDSXXXXFSLAAGVAVLAALDIIVLGAMRLYYVSFVTGDAGLKQLLAGFEKKYAEECEDVAEASADCLAQASII----LSLNKTNDLYVPAVLQGVIAAIFGFVGLRAVFAHDALAARAYLWSWPPRIVLTLVELVMQRIRFERY--DMGFLWGFTVVWNIPRVLILAYCLKVAWS 216          
BLAST of mRNA_Ecto-sp8_S_contig9693.31403.1 vs. uniprot
Match: D8LKG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG8_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 3.880e-7
Identity = 38/133 (28.57%), Postives = 63/133 (47.37%), Query Frame = 0
Query:   24 GVRRQWWWQPGPVDSCCFCCSLRAGVGILAAKDLFYNGIWAAFYSRSDVEKMLRTAIAILQSAYDKDCKDAPVQTVDCLQLSHNIEQAEFQVELLDNLPVIVYVEAVIAMLAGAVGLFAVFKSNALSAKIYLW 156
            G R++WWWQPGPVD+  FC  L  GVG+ A  +L Y  +  A              +   +  + +DC+        C +L  +I     ++ L ++  V   + A + ++ G +GL A +  +A +AK  LW
Sbjct:   40 GRRKEWWWQPGPVDTVGFCWDLDMGVGLNAVGELVYGILAFASIGHRLAADTSTVVVQEKEEEFARDCEGLEQMPYKCERLIGSI----LELTLANDTLVPNVLAAAVLLMLGWLGLRAWWCFDARAAKFNLW 168          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9693.31403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LNW7_ECTSI7.590e-12785.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JV23_9PHAE7.800e-9179.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNW6_ECTSI2.360e-2637.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LKG8_ECTSI3.880e-728.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 205..209
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 173..183
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 184..204
NoneNo IPR availableTMHMMTMhelixcoord: 187..204
NoneNo IPR availableTMHMMTMhelixcoord: 153..172
NoneNo IPR availableTMHMMTMhelixcoord: 122..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9693contigEcto-sp8_S_contig9693:1174..5577 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9693.31403.1mRNA_Ecto-sp8_S_contig9693.31403.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9693 1174..5577 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9693.31403.1 ID=prot_Ecto-sp8_S_contig9693.31403.1|Name=mRNA_Ecto-sp8_S_contig9693.31403.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=209bp
MSMVYRQVEQAEPVDEARFNGEGGVRRQWWWQPGPVDSCCFCCSLRAGVG
ILAAKDLFYNGIWAAFYSRSDVEKMLRTAIAILQSAYDKDCKDAPVQTVD
CLQLSHNIEQAEFQVELLDNLPVIVYVEAVIAMLAGAVGLFAVFKSNALS
AKIYLWTWLPKFFVGLVGNYTVRAEMKQYGIDNGDGPGVVTGELVGVVFL
LYFVKVGRS
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