prot_Ecto-sp8_S_contig96.31254.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig96.31254.1
Unique Nameprot_Ecto-sp8_S_contig96.31254.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length130
Homology
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BLAST of mRNA_Ecto-sp8_S_contig96.31254.1 vs. uniprot
Match: D7FJE9_ECTSI (PTIF2, plastid translation intiation factor 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJE9_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 2.130e-70
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0 
Query:   12 MAAAWRGTVFTLLTAACASGFVQPGCPGALAGREWARGGAKSCARPVCSSVLRMSDHTEDRPRTQVFESSGGRDGEEGSAASKSADAPYVLTKPMDLVRVRGFGSGSSAGYFPGRDGGG 130
            MAAAWRGTVFTLLTAACASGFVQPGCPGALAGREWARGGAKSCARPVCSSVLRMSDHTEDRPRTQVFESSGG DGEEGSAASKSADAPYVLTKPMDLVRVRGFGSGSSAGYFPGRDGGG
Sbjct:    1 MAAAWRGTVFTLLTAACASGFVQPGCPGALAGREWARGGAKSCARPVCSSVLRMSDHTEDRPRTQVFESSGGGDGEEGSAASKSADAPYVLTKPMDLVRVRGFGSGSSAGYFPGRDGGG 119
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig96.31254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJE9_ECTSI2.130e-7099.16PTIF2, plastid translation intiation factor 2 n=2 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.533

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig96contigEcto-sp8_S_contig96:29520..30913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig96.31254.1mRNA_Ecto-sp8_S_contig96.31254.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig96 29520..30913 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig96.31254.1 ID=prot_Ecto-sp8_S_contig96.31254.1|Name=mRNA_Ecto-sp8_S_contig96.31254.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=130bp
TAARSFCTALDMAAAWRGTVFTLLTAACASGFVQPGCPGALAGREWARGG
AKSCARPVCSSVLRMSDHTEDRPRTQVFESSGGRDGEEGSAASKSADAPY
VLTKPMDLVRVRGFGSGSSAGYFPGRDGGG
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