prot_Ecto-sp8_S_contig9554.31172.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9554.31172.1
Unique Nameprot_Ecto-sp8_S_contig9554.31172.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length238
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9554.31172.1 vs. uniprot
Match: D7G2I3_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I3_ECTSI)

HSP 1 Score: 436 bits (1121), Expect = 6.690e-154
Identity = 233/238 (97.90%), Postives = 233/238 (97.90%), Query Frame = 0 
Query:    1 MSLHRSSARVGDSKSGKGGXXXSSVVVGKDSSRHLWGIPNVVYTFTHGFMMEMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHEQFKNQTIDKSQKQKAGTLSVMKYKVTMSQAATNARESTRRRKNSVTSRAMQRVKRPVQQKWTEALDWKKRSCLLTGESLSLFSDPKDTEPSQIVYLKGATAEPELGQAFKDSAFRVETNKWKKGDEVVDGTERRTFTFLAESKDDKELWLYQIR 238
            MSLHRSSA VGD KSGKG XXX  VVVGKDSSRHLWGIPNVVYTFTHGFMMEMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHEQFKNQTIDKSQKQKAGTLSVMKYKVTMSQAATNARESTRRRKNSVTSRAMQRVKRPVQQKWTEALDWKKRSCLLTGESLSLFSDPKDTEPSQIVYLKGATAEPELGQAFKDSAFRVETNKWKKGDEVVDGTERRTFTFLAESKDDKELWLYQIR
Sbjct:    1 MSLHRSSATVGDDKSGKGXXXXXXVVVGKDSSRHLWGIPNVVYTFTHGFMMEMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHEQFKNQTIDKSQKQKAGTLSVMKYKVTMSQAATNARESTRRRKNSVTSRAMQRVKRPVQQKWTEALDWKKRSCLLTGESLSLFSDPKDTEPSQIVYLKGATAEPELGQAFKDSAFRVETNKWKKGDEVVDGTERRTFTFLAESKDDKELWLYQIR 238
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BLAST of mRNA_Ecto-sp8_S_contig9554.31172.1 vs. uniprot
Match: A0A6H5JJ45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ45_9PHAE)

HSP 1 Score: 416 bits (1068), Expect = 1.080e-138
Identity = 219/238 (92.02%), Postives = 230/238 (96.64%), Query Frame = 0 
Query:    1 MSLHRSSARVGDSKSGKGGXXXSSVVVGKDSSRHLWGIPNVVYTFTHGFMMEMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHEQFKNQTIDKSQKQKAGTLSVMKYKVTMSQAATNARESTRRRKNSVTSRAMQRVKRPVQQKWTEALDWKKRSCLLTGESLSLFSDPKDTEPSQIVYLKGATAEPELGQAFKDSAFRVETNKWKKGDEVVDGTERRTFTFLAESKDDKELWLYQIR 238
            MSL RSS RVGD KSGKGGXXXSSVVVGKDSSRHLWGIPNVVYTFTHGFM EMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHE+FKN+TIDKS K K GTLSVMK+KVTMSQAATNARESTRRRKNSVTSRAM++VKRPVQQKWTEA+DWKKRSC+LTGESLSLFSDPKDTEPSQIVYL GATAEPELGQAFK+SAFRVETNKWKKGD++VDGTERRTFTFLAESKDD+ELWLYQIR
Sbjct:  303 MSLDRSSGRVGDGKSGKGGXXXSSVVVGKDSSRHLWGIPNVVYTFTHGFMREMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHEEFKNETIDKSHKHKEGTLSVMKHKVTMSQAATNARESTRRRKNSVTSRAMRKVKRPVQQKWTEAVDWKKRSCILTGESLSLFSDPKDTEPSQIVYLTGATAEPELGQAFKESAFRVETNKWKKGDDLVDGTERRTFTFLAESKDDRELWLYQIR 540
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9554.31172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2I3_ECTSI6.690e-15497.90PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JJ45_9PHAE1.080e-13892.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..76
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 150..238
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 146..238
e-value: 1.1E-10
score: 41.9
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 139..238
score: 9.102
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 134..238
e-value: 6.4E-12
score: 47.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9554contigEcto-sp8_S_contig9554:2006..4835 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9554.31172.1mRNA_Ecto-sp8_S_contig9554.31172.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9554 2006..4835 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9554.31172.1 ID=prot_Ecto-sp8_S_contig9554.31172.1|Name=mRNA_Ecto-sp8_S_contig9554.31172.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=238bp
MSLHRSSARVGDSKSGKGGGGGSSVVVGKDSSRHLWGIPNVVYTFTHGFM
MEMLQLKMLKSQTNLLKTSIQKLKDRLETQKRHEQFKNQTIDKSQKQKAG
TLSVMKYKVTMSQAATNARESTRRRKNSVTSRAMQRVKRPVQQKWTEALD
WKKRSCLLTGESLSLFSDPKDTEPSQIVYLKGATAEPELGQAFKDSAFRV
ETNKWKKGDEVVDGTERRTFTFLAESKDDKELWLYQIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf