prot_Ecto-sp8_S_contig93461.30809.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig93461.30809.1
Unique Nameprot_Ecto-sp8_S_contig93461.30809.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length54
Homology
BLAST of mRNA_Ecto-sp8_S_contig93461.30809.1 vs. uniprot
Match: A0A6H5J7V5_9PHAE (VHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7V5_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 2.100e-23
Identity = 53/54 (98.15%), Postives = 53/54 (98.15%), Query Frame = 0
Query:    1 LTEVIRILRKKLGSSNTMVLSVALTLAETLVKNCHDPVHREIASERFMAAVAKI 54
            LTEVIRILRKKLGSSNT VLSVALTLAETLVKNCHDPVHREIASERFMAAVAKI
Sbjct:   58 LTEVIRILRKKLGSSNTTVLSVALTLAETLVKNCHDPVHREIASERFMAAVAKI 111          
BLAST of mRNA_Ecto-sp8_S_contig93461.30809.1 vs. uniprot
Match: A0A835YSD0_9STRA (VHS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD0_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.080e-7
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    3 EVIRILRKKLGSSNTMVLSVALTLAETLVKNCHDPVHREIASERFM 48
            EV+R +RK+L   +  V+ +ALTL ETLVKNC  P+HREIA E FM
Sbjct:   65 EVVRAVRKRLAHKSIPVVMLALTLTETLVKNCGMPLHREIAKENFM 110          
BLAST of mRNA_Ecto-sp8_S_contig93461.30809.1 vs. uniprot
Match: A0A0P1AM73_PLAHL (VHS domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AM73_PLAHL)

HSP 1 Score: 54.3 bits (129), Expect = 3.880e-7
Identity = 27/54 (50.00%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    1 LTEVIRILRKKLGSSNTMVLSVALTLAETLVKNCHDPVHREIASERFMAAVAKI 54
            L E IR LR +LG  ++ V+ +ALTL E++VKNC D VH+EIA+E+FM+ + ++
Sbjct:   78 LKESIRYLRLRLGDPSSRVVILALTLTESIVKNCGDLVHQEIATEQFMSEMEEL 131          
BLAST of mRNA_Ecto-sp8_S_contig93461.30809.1 vs. uniprot
Match: A0A4D9CTC8_9STRA (VHS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTC8_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 5.310e-7
Identity = 25/52 (48.08%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    3 EVIRILRKKLGSSNTMVLSVALTLAETLVKNCHDPVHREIASERFMAAVAKI 54
            E+IR +RK+L   +T V+ +AL L ET+VKNC   VH+E+A+ +FMA +A++
Sbjct:   64 EIIRQIRKRLQHRSTRVVHMALELIETVVKNCGPSVHKEVATPKFMATMARV 115          
BLAST of mRNA_Ecto-sp8_S_contig93461.30809.1 vs. uniprot
Match: A0A3R7IPJ5_9STRA (VHS domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IPJ5_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 9.890e-7
Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 0
Query:    1 LTEVIRILRKKLGSSNTMVLSVALTLAETLVKNCHDPVHREIASERFMAAVAKI 54
            L E IR LR +LG  ++ V+ +ALTL E++VKNC D VH+EIA+E FM  + ++
Sbjct:   82 LKESIRYLRLRLGDPSSRVVILALTLTESIVKNCGDLVHQEIATETFMGEMEEL 135          
BLAST of mRNA_Ecto-sp8_S_contig93461.30809.1 vs. uniprot
Match: A0A3M6VSQ9_9STRA (VHS domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSQ9_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 9.910e-7
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 LTEVIRILRKKLGSSNTMVLSVALTLAETLVKNCHDPVHREIASERFM 48
            L E +R LR +LG  ++ V+ +ALTL E++VKNC D VH+EIASE FM
Sbjct:   11 LKESVRYLRLRLGDPSSRVVVLALTLTESIVKNCGDLVHQEIASESFM 58          
BLAST of mRNA_Ecto-sp8_S_contig93461.30809.1 vs. uniprot
Match: A0A2P4XPC6_9STRA (STAM like protein Hse1 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPC6_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 1.050e-6
Identity = 26/48 (54.17%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 LTEVIRILRKKLGSSNTMVLSVALTLAETLVKNCHDPVHREIASERFM 48
            L E IR L+ +LG +++ V+ +ALTL E++VKNC D VH+EIA+E FM
Sbjct:   82 LKESIRYLKLRLGDASSRVVILALTLTESVVKNCGDLVHQEIATESFM 129          
BLAST of mRNA_Ecto-sp8_S_contig93461.30809.1 vs. uniprot
Match: M4BWH7_HYAAE (VHS domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BWH7_HYAAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.360e-6
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 LTEVIRILRKKLGSSNTMVLSVALTLAETLVKNCHDPVHREIASERFM 48
            L E IR L+ +LG S++ V+ +ALTL E++VKNC D VH+EIA+E FM
Sbjct:   82 LKESIRYLKLRLGDSSSRVVILALTLTESIVKNCGDLVHQEIATEPFM 129          
BLAST of mRNA_Ecto-sp8_S_contig93461.30809.1 vs. uniprot
Match: A0A6N2LSK8_SALVM (VHS domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2LSK8_SALVM)

HSP 1 Score: 50.4 bits (119), Expect = 1.960e-6
Identity = 22/52 (42.31%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    3 EVIRILRKKLGSSNTMVLSVALTLAETLVKNCHDPVHREIASERFMAAVAKI 54
            +V++++++KLGS N+ V  +ALTL ET++KNC D VH  +A +  +  + KI
Sbjct:   31 DVVKVIKRKLGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKDLLHEMVKI 82          
BLAST of mRNA_Ecto-sp8_S_contig93461.30809.1 vs. uniprot
Match: A0A662X9B6_9STRA (VHS domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9B6_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 2.530e-6
Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 LTEVIRILRKKLGSSNTMVLSVALTLAETLVKNCHDPVHREIASERFM 48
            L E IR LR +LG  ++ V+ +ALTL E+LVKNC D VH EIA+E FM
Sbjct:   82 LKESIRYLRLRLGDPSSHVIILALTLTESLVKNCGDLVHLEIATEAFM 129          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig93461.30809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J7V5_9PHAE2.100e-2398.15VHS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YSD0_9STRA2.080e-758.70VHS domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A0P1AM73_PLAHL3.880e-750.00VHS domain-containing protein n=1 Tax=Plasmopara h... [more]
A0A4D9CTC8_9STRA5.310e-748.08VHS domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A3R7IPJ5_9STRA9.890e-750.00VHS domain-containing protein n=4 Tax=Phytophthora... [more]
A0A3M6VSQ9_9STRA9.910e-756.25VHS domain-containing protein n=2 Tax=Peronospora ... [more]
A0A2P4XPC6_9STRA1.050e-654.17STAM like protein Hse1 (Fragment) n=1 Tax=Phytopht... [more]
M4BWH7_HYAAE1.360e-656.25VHS domain-containing protein n=1 Tax=Hyaloperonos... [more]
A0A6N2LSK8_SALVM1.960e-642.31VHS domain-containing protein n=1 Tax=Salix vimina... [more]
A0A662X9B6_9STRA2.530e-658.33VHS domain-containing protein n=2 Tax=Nothophytoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002014VHS domainPFAMPF00790VHScoord: 3..53
e-value: 4.2E-11
score: 42.9
IPR002014VHS domainPROSITEPS50179VHScoord: 1..54
score: 15.289
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 1..54
e-value: 5.5E-14
score: 54.0
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 3..52
NoneNo IPR availablePANTHERPTHR45898:SF2TARGET OF MYB PROTEIN 1coord: 3..54
NoneNo IPR availablePANTHERPTHR45898FAMILY NOT NAMEDcoord: 3..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig93461contigEcto-sp8_S_contig93461:444..605 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig93461.30809.1mRNA_Ecto-sp8_S_contig93461.30809.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig93461 444..605 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig93461.30809.1 ID=prot_Ecto-sp8_S_contig93461.30809.1|Name=mRNA_Ecto-sp8_S_contig93461.30809.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=54bp
LTEVIRILRKKLGSSNTMVLSVALTLAETLVKNCHDPVHREIASERFMAA
VAKI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002014VHS_dom
IPR008942ENTH_VHS