prot_Ecto-sp8_S_contig11052.1426.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig11052.1426.1
Unique Nameprot_Ecto-sp8_S_contig11052.1426.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length611
Homology
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BLAST of mRNA_Ecto-sp8_S_contig11052.1426.1 vs. uniprot
Match: A0A2H4ECA4_9PHAE (SAMSARA n=1 Tax=Ectocarpus sp. JMC-2016a TaxID=1813763 RepID=A0A2H4ECA4_9PHAE)

HSP 1 Score: 506 bits (1303), Expect = 1.280e-165
Identity = 543/618 (87.86%), Postives = 547/618 (88.51%), Query Frame = 0 
Query:    1 MAVVGANSFALPDTAQHGMNNGNGNSSGTQMHHGGAGGGTGA--PALPSLPYNGQSSRMPFDTRSTAAETPGGGVWLDQSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPQHPGALAPGLVYASKAARQAANMDPSIQSSQHIPLWMTPPVGMERRGHSMAYPHGGMRTAQHDQGQGQGQDKGQGGPPHPSTPPQGATQVPNSRDGSRMNTAPPFSAIRGFDTNSGFHQAQQSHESLRRGDHFATATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLPPTQQSAVAIQSPAQQVASAAGSSLFSSSSYRPPSPRNLPGPTAIPQRSDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFTVNGVPXXXXXXXXXXXVSQRLLDPSVQMPPMSSSDSRGAPQHFPXXXXXXXXXXXXPHXXXXXXXXXXXXXXX------YWDRSMPGRVWPPPSHTALAFDFTRVSAAGGGSAASGNSMASNPSQPPLLGVRAGAVTATTAGWR 610
            +AVVGANSFALPDTAQHGMNNGNGNSSGTQ+HHGG         PALPSLPYNGQSSRMPFDTRSTAAETPGGG WLDQSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    TGPQHPGALAPGLVYASKAARQAANMDPSIQSSQHIPLWMTPPVGMERRGHSMAYPHGGMRTAQH+QGQ  GQDKGQGGP HPSTPPQGATQVPNSRDGSRMNTAP FS IRGFDTNSGFHQAQQSHESLRRGDHFATA  XXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               SSYRPPSPRNLPGPTA+PQRSDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GF VNGVPXXXXXXXXXXXVSQRLLDPSVQMPPMSSSDSRGAPQHFPXXXXXXXXXXXX  XXXXXXXXXXXXXXX      YWDRSMPGRVWPPPSHTALAFDFTR SAAGGGS   GNSMASNPSQPP LGVRAGA TATTAGWR
Sbjct:  338 IAVVGANSFALPDTAQHGMNNGNGNSSGTQVHHGGGXXXXXXXXPALPSLPYNGQSSRMPFDTRSTAAETPGGGAWLDQSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----TGPQHPGALAPGLVYASKAARQAANMDPSIQSSQHIPLWMTPPVGMERRGHSMAYPHGGMRTAQHNQGQ--GQDKGQGGPLHPSTPPQGATQVPNSRDGSRMNTAPQFSGIRGFDTNSGFHQAQQSHESLRRGDHFATAATXXXXXXXXXXXXXXXXXGISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSYRPPSPRNLPGPTAMPQRSDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFAVNGVPXXXXXXXXXXXVSQRLLDPSVQMPPMSSSDSRGAPQHFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWDRSMPGRVWPPPSHTALAFDFTRASAAGGGSXXXGNSMASNPSQPPPLGVRAGAATATTAGWR 949
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11052.1426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2H4ECA4_9PHAE1.280e-16587.86SAMSARA n=1 Tax=Ectocarpus sp. JMC-2016a TaxID=181... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..104
NoneNo IPR availablePANTHERPTHR21704:SF19coord: 277..545
IPR033031SCC2/Nipped-B familyPANTHERPTHR21704NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATEDcoord: 277..545

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig11052contigEcto-sp8_S_contig11052:1183..3629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig11052.1426.1mRNA_Ecto-sp8_S_contig11052.1426.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig11052 1..4307 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig11052.1426.1 ID=prot_Ecto-sp8_S_contig11052.1426.1|Name=mRNA_Ecto-sp8_S_contig11052.1426.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=611bp
MAVVGANSFALPDTAQHGMNNGNGNSSGTQMHHGGAGGGTGAPALPSLPY
NGQSSRMPFDTRSTAAETPGGGVWLDQSRQQQEKQQQQQQQQQQQQQQQQ
QQQQAGGQQQQQQQQQQQQQQQTGPQHPGALAPGLVYASKAARQAANMDP
SIQSSQHIPLWMTPPVGMERRGHSMAYPHGGMRTAQHDQGQGQGQDKGQG
GPPHPSTPPQGATQVPNSRDGSRMNTAPPFSAIRGFDTNSGFHQAQQSHE
SLRRGDHFATATTAAAAAAAAAAAQPASQHGISQTTLGQQQQQPQQQQPP
MDQQYQQLVGQQQQQPRSSNPQGLPPTQQSAVAIQSPAQQVASAAGSSLF
SSSSYRPPSPRNLPGPTAIPQRSDSGGGGGGGGADDGSGRQQYPQRFLES
STSSSYSKGSTGPEHYPPAPPSNANASTGGATLGGGGGGGGGGDGYYPPV
AAFAASSSGGAGGGASNGSGFTVNGVPGGNGGGGGGAGVSQRLLDPSVQM
PPMSSSDSRGAPQHFPQQQQQQQQQLLLPHGSPANGSVQQQQQQQYWDRS
MPGRVWPPPSHTALAFDFTRVSAAGGGSAASGNSMASNPSQPPLLGVRAG
AVTATTAGWR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033031SCC2/Nipped-B