mRNA_Ecto-sp8_S_contig11052.1426.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig11052.1426.1 vs. uniprot
Match: A0A2H4ECA4_9PHAE (SAMSARA n=1 Tax=Ectocarpus sp. JMC-2016a TaxID=1813763 RepID=A0A2H4ECA4_9PHAE) HSP 1 Score: 643 bits (1658), Expect = 5.570e-214 Identity = 636/729 (87.24%), Postives = 640/729 (87.79%), Query Frame = 1
Query: 1 EWFLAHKRWPYPASKEKNELAEKTKLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFE-------DHSLVEKKLPLQQEQQXXXXXXXXPPQXXXXXXXXXXHQSQQQRGMAVVGANSFALPDTAQHGMNNGNGNSSGTQMHHGGAGGGTGA--PALPSLPYNGQSSRMPFDTRSTAAETPGGGVWLDQSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPQHPGALAPGLVYASKAARQAANMDPSIQSSQHIPLWMTPPVGMERRGHSMAYPHGGMRTAQHDQGQGQGQDKGQGGPPHPSTPPQGATQVPNSRDGSRMNTAPPFSAIRGFDTNSGFHQAQQSHESLRRGDHFATATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLPPTQQSAVAIQSPAQQVASAAGSSLFSSSSYRPPSPRNLPGPTAIPQRSDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFTVNGVPXXXXXXXXXXXVSQRLLDPSVQMPPMSSSDSRGAPQHFPXXXXXXXXXXXXPHXXXXXXXXXXXXXXX------YWDRSMPGRVWPPPSHTALAFDFTRVSAAGGGSAASGNSMASNPSQPPLLGVRAGAVTATTAGWR 2142
EWFLAHKRWPYPASKEKNELAEKT LTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFE DHSLVEKKLPLQQEQ XXXXXXXX XXXXXXX QQQRG+AVVGANSFALPDTAQHGMNNGNGNSSGTQ+HHGG PALPSLPYNGQSSRMPFDTRSTAAETPGGG WLDQSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TGPQHPGALAPGLVYASKAARQAANMDPSIQSSQHIPLWMTPPVGMERRGHSMAYPHGGMRTAQH+QGQ GQDKGQGGP HPSTPPQGATQVPNSRDGSRMNTAP FS IRGFDTNSGFHQAQQSHESLRRGDHFATA XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SSYRPPSPRNLPGPTA+PQRSDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GF VNGVPXXXXXXXXXXXVSQRLLDPSVQMPPMSSSDSRGAPQHFPXXXXXXXXXXXX XXXXXXXXXXXXXXX YWDRSMPGRVWPPPSHTALAFDFTR SAAGGGS GNSMASNPSQPP LGVRAGA TATTAGWR
Sbjct: 233 EWFLAHKRWPYPASKEKNELAEKTNLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFEFCVMNPKDHSLVEKKLPLQQEQXXXXXXXXX------XXXXXXXXXXQQQRGIAVVGANSFALPDTAQHGMNNGNGNSSGTQVHHGGGXXXXXXXXPALPSLPYNGQSSRMPFDTRSTAAETPGGGAWLDQSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----TGPQHPGALAPGLVYASKAARQAANMDPSIQSSQHIPLWMTPPVGMERRGHSMAYPHGGMRTAQHNQGQ--GQDKGQGGPLHPSTPPQGATQVPNSRDGSRMNTAPQFSGIRGFDTNSGFHQAQQSHESLRRGDHFATAATXXXXXXXXXXXXXXXXXGISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSYRPPSPRNLPGPTAMPQRSDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFAVNGVPXXXXXXXXXXXVSQRLLDPSVQMPPMSSSDSRGAPQHFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWDRSMPGRVWPPPSHTALAFDFTRASAAGGGSXXXGNSMASNPSQPPPLGVRAGAATATTAGWR 949
BLAST of mRNA_Ecto-sp8_S_contig11052.1426.1 vs. uniprot
Match: D7FSW8_ECTSI (Homeobox domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW8_ECTSI) HSP 1 Score: 177 bits (450), Expect = 1.260e-46 Identity = 111/134 (82.84%), Postives = 113/134 (84.33%), Query Frame = 1
Query: 1 EWFLAHKRWPYPASKEKNELAEKTKLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFEDHSLVEKKLPLQQEQQXXXXXXXXPPQXXXXXXXXXXHQSQQQRGMAVVGANSFALPDTAQHGMNNGNGNSSGTQ 402
EWFLAHKRWPYPASKEKNELAEKT LTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFED S VEKKLPL QEQQXXXXXXXX XXXXXXX QRG+ + GANSFAL DT QHG NNGNG SSGTQ
Sbjct: 115 EWFLAHKRWPYPASKEKNELAEKTNLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFEDPSPVEKKLPLPQEQQXXXXXXXX------XXXXXXXXXXXXQRGIGLGGANSFALADTGQHGRNNGNGXSSGTQ 242
BLAST of mRNA_Ecto-sp8_S_contig11052.1426.1 vs. uniprot
Match: A0A367J7V4_RHIST (Homeobox protein Meis3 n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367J7V4_RHIST) HSP 1 Score: 60.5 bits (145), Expect = 9.940e-7 Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 1 EWFLAHKRWPYPASKEKNELAEKTKLTTLQISNWFTNKRKRHWTPVI 141
+W + HK+ PYPA KEK ELA++T LT QISNWF N R+R P++
Sbjct: 85 KWLIQHKKHPYPAEKEKVELAQRTGLTVSQISNWFINARRRILQPML 131
BLAST of mRNA_Ecto-sp8_S_contig11052.1426.1 vs. uniprot
Match: A0A7S3CYD5_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CYD5_9EUKA) HSP 1 Score: 61.6 bits (148), Expect = 2.360e-6 Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query: 1 EWFLAHKRWPYPASKEKNELAEKTKLTTLQISNWFTNKRKRHWTPVIKKR 150
+WF H PYP EK +LAEKT LTT Q+S WF N+RKR W P++K R
Sbjct: 47 KWFYEHFLHPYPEDYEKAQLAEKTGLTTEQVSYWFVNQRKRVWQPLLKAR 96
BLAST of mRNA_Ecto-sp8_S_contig11052.1426.1 vs. uniprot
Match: A0A1X0SE60_RHIZD (Homeobox domain-containing protein n=4 Tax=Rhizopus TaxID=4842 RepID=A0A1X0SE60_RHIZD) HSP 1 Score: 60.1 bits (144), Expect = 5.160e-6 Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 1 EWFLAHKRWPYPASKEKNELAEKTKLTTLQISNWFTNKRKRHWTPVI 141
+W + HK+ PYPA KEK +LA+KT LT QISNWF N R+R P++
Sbjct: 158 KWLIQHKKHPYPAEKEKIDLAQKTGLTVNQISNWFINARRRILQPML 204
BLAST of mRNA_Ecto-sp8_S_contig11052.1426.1 vs. uniprot
Match: I1C6C8_RHIO9 (Homeobox domain-containing protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1C6C8_RHIO9) HSP 1 Score: 58.2 bits (139), Expect = 1.280e-5 Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 4 WFLAHKRWPYPASKEKNELAEKTKLTTLQISNWFTNKRKRHWTPVI 141
W + HK+ PYPA KEK +LA++T LT QISNWF N R+R P++
Sbjct: 150 WLIQHKKHPYPAEKEKIDLAQQTGLTVNQISNWFINARRRILQPML 195
BLAST of mRNA_Ecto-sp8_S_contig11052.1426.1 vs. uniprot
Match: A0A3G5A261_9VIRU (Uncharacterized protein n=1 Tax=Harvfovirus sp. TaxID=2487768 RepID=A0A3G5A261_9VIRU) HSP 1 Score: 56.6 bits (135), Expect = 1.370e-5 Identity = 25/49 (51.02%), Postives = 30/49 (61.22%), Query Frame = 1
Query: 1 EWFLAHKRWPYPASKEKNELAEKTKLTTLQISNWFTNKRKRHWTPVIKK 147
EW + ++PYP KEKN+ TKLT LQ+ NWF N R R W P KK
Sbjct: 83 EWVSLNSKYPYPTQKEKNQFVLTTKLTYLQVQNWFINWRTRVWKPNHKK 131
BLAST of mRNA_Ecto-sp8_S_contig11052.1426.1 vs. uniprot
Match: I1CEZ8_RHIO9 (Homeobox domain-containing protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CEZ8_RHIO9) HSP 1 Score: 58.2 bits (139), Expect = 1.660e-5 Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 4 WFLAHKRWPYPASKEKNELAEKTKLTTLQISNWFTNKRKRHWTPVI 141
W + HK+ PYPA KEK +LA++T LT QISNWF N R+R P++
Sbjct: 144 WLIQHKKHPYPAEKEKIDLAQQTGLTVNQISNWFINARRRILQPML 189
BLAST of mRNA_Ecto-sp8_S_contig11052.1426.1 vs. uniprot
Match: A0A367IPR6_RHIST (Homeobox domain-containing protein (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367IPR6_RHIST) HSP 1 Score: 57.4 bits (137), Expect = 3.510e-5 Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 1
Query: 1 EWFLAHKRWPYPASKEKNELAEKTKLTTLQISNWFTNKRKRHWTPVI 141
+W + HK+ PYPA KEK +LA T LT QISNWF N R+R P++
Sbjct: 172 KWLIQHKKHPYPAEKEKADLARHTGLTVNQISNWFINARRRILQPML 218
BLAST of mRNA_Ecto-sp8_S_contig11052.1426.1 vs. uniprot
Match: A0A1C7NP55_9FUNG (Putative homeobox protein Meis3-like 1 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NP55_9FUNG) HSP 1 Score: 57.4 bits (137), Expect = 3.890e-5 Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 1
Query: 1 EWFLAHKRWPYPASKEKNELAEKTKLTTLQISNWFTNKRKRHWTPVI 141
+W + HK+ PYPA KEK +LA T LT QISNWF N R+R P++
Sbjct: 149 KWLIQHKKHPYPAEKEKADLARHTGLTVNQISNWFINARRRILQPML 195 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig11052.1426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig11052.1426.1 >prot_Ecto-sp8_S_contig11052.1426.1 ID=prot_Ecto-sp8_S_contig11052.1426.1|Name=mRNA_Ecto-sp8_S_contig11052.1426.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=611bp MAVVGANSFALPDTAQHGMNNGNGNSSGTQMHHGGAGGGTGAPALPSLPYback to top mRNA from alignment at Ecto-sp8_S_contig11052:1..4307+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig11052.1426.1 ID=mRNA_Ecto-sp8_S_contig11052.1426.1|Name=mRNA_Ecto-sp8_S_contig11052.1426.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4307bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11052:1..4307+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig11052:1..4307+ >mRNA_Ecto-sp8_S_contig11052.1426.1 ID=mRNA_Ecto-sp8_S_contig11052.1426.1|Name=mRNA_Ecto-sp8_S_contig11052.1426.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1833bp|location=Sequence derived from alignment at Ecto-sp8_S_contig11052:1..4307+ (Ectocarpus species8 EcLAC_412)back to top |