prot_Ecto-sp8_S_contig1034.553.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig1034.553.1
Unique Nameprot_Ecto-sp8_S_contig1034.553.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length667
Homology
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BLAST of mRNA_Ecto-sp8_S_contig1034.553.1 vs. uniprot
Match: D7FRI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI7_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 7.290e-80
Identity = 187/340 (55.00%), Postives = 197/340 (57.94%), Query Frame = 0 
Query:  359 ISEVEIYVEVTQTEVFIPAAEAWNDVAADTITTVTPSASWSVAGFGPNMTTDGDDNTVAATYWSCQAPTGTLSSSFDHDSCWLYFELNDDYIASYMILYVHESNDATKEPIQFDVYGCSIDAFSCYSVSQYDEPVGSSTTVPGTPLGEGERVNLIRPSAASFGIHFNLSAGAIVSISEVEIFVQTPDATPTPAPFVPTPETEAPVYSWMSGDDSDDDYVWANDXXXATGVNVSXXXXXXXXXXXXSTANDDGPAI--------------------------------GLPSSTADDADDAADIEDFGNGALARGGVCSRQGLVGAVAVGAIFISFAANAM 666
            +S+VEIYVEVTQTEVFIPAAEAWNDVAADTITTVTPSASWSVAGFGPNMTT                                                                          Y+    DE VGSSTTVPGTPLGEGERVNLIRP   S GIHFNLSAGAIVSISEVE+FVQTPDATPTPAPFVPTPETEAPVYSWM+GDDSD        XXX       XXXXXXXXXXXX TA D+   +                                       DDADDAADI++FGNGALARGGVCSRQGLVG VAVGA+FISFAANAM
Sbjct:   45 LSQVEIYVEVTQTEVFIPAAEAWNDVAADTITTVTPSASWSVAGFGPNMTT--------------------------------------------------------------------------YA----DELVGSSTTVPGTPLGEGERVNLIRPLTVSLGIHFNLSAGAIVSISEVELFVQTPDATPTPAPFVPTPETEAPVYSWMNGDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATDEAGGVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDADDAADIDNFGNGALARGGVCSRQGLVGVVAVGAMFISFAANAM 306
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1034.553.1 vs. uniprot
Match: D7FRI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI8_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 1.420e-43
Identity = 83/90 (92.22%), Postives = 86/90 (95.56%), Query Frame = 0 
Query:  106 FHESDDATQLSISFDVEVGYDTVHTDLTSPGTALGAGQRVNIPPGTSGNYLHLLFDLTSDQTIDVSEVEIFLDVDDPDDVVVAALPTIAT 195
            FHESDDATQLSISFDVEVGYDTVHTDLTSPGTALGAGQRVN+PP  SGNYLHLLFDLTSDQ IDVSEVEI+LDVDDPDDVVVA LPTI+T
Sbjct:   61 FHESDDATQLSISFDVEVGYDTVHTDLTSPGTALGAGQRVNMPPDASGNYLHLLFDLTSDQAIDVSEVEIYLDVDDPDDVVVATLPTIST 150
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1034.553.1 vs. uniprot
Match: A0A6H5L2E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E1_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 2.480e-37
Identity = 92/176 (52.27%), Postives = 97/176 (55.11%), Query Frame = 0 
Query:   63 LTRDGEDNSVAESRWSCTLGTTTTCELQFEFDDYFDVSYLMIYF-------------------------------------------HESDDATQLSISFDVEVGYDTVHTDLTSPGTALGAGQRVNIPPGTSGNYLHLLFDLTSDQTIDVSEVEIFLDVDDPDDVVVAALPTIAT 195
            LT+DG DNSVAESRWSCTLGT TTCELQ EFDD FDVSYLMI F                                           HESDDATQLS SFDV+VGY TVHTDLTSPGTALGAGQRV                            EI+LDVDDPD+VVVA LPTI+T
Sbjct:    8 LTQDGADNSVAESRWSCTLGTATTCELQIEFDDCFDVSYLMISFKNTAGVGARPPTPCPVKTETVLRFAANETTRSVRLPSVDPLDFHESDDATQLSNSFDVQVGYGTVHTDLTSPGTALGAGQRV----------------------------EIYLDVDDPDNVVVATLPTIST 155
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1034.553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FRI7_ECTSI7.290e-8055.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRI8_ECTSI1.420e-4392.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2E1_9PHAE2.480e-3752.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 382..544
e-value: 2.1E-5
score: 26.5
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 57..176
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 647..665
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 666..666
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..646
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.889

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1034contigEcto-sp8_S_contig1034:2289..10886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1034.553.1mRNA_Ecto-sp8_S_contig1034.553.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig1034 2289..10886 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig1034.553.1 ID=prot_Ecto-sp8_S_contig1034.553.1|Name=mRNA_Ecto-sp8_S_contig1034.553.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=667bp
MMSHGWMARLGMVALVLSIASRFASAEIVEAANVTNVVVDATAWDLRLGS
EGGCGLTGCDPRLTRDGEDNSVAESRWSCTLGTTTTCELQFEFDDYFDVS
YLMIYFHESDDATQLSISFDVEVGYDTVHTDLTSPGTALGAGQRVNIPPG
TSGNYLHLLFDLTSDQTIDVSEVEIFLDVDDPDDVVVAALPTIATVKVDT
VSNVVAAATFWDLRTDAGCGEAGCDPLLAHDGHNNTVASSRWSCESSMDV
DVGNYVFSSSPQYCQLQFVFGESDSFWDDENLIFTVSHVVIYVHESDDAT
KEAMTMNVYSSYSAYDPAGSFVTVPGTPLGTGHRVNLNRPLATSVTVIPL
LSAGQWVDISEVEIYVEVTQTEVFIPAAEAWNDVAADTITTVTPSASWSV
AGFGPNMTTDGDDNTVAATYWSCQAPTGTLSSSFDHDSCWLYFELNDDYI
ASYMILYVHESNDATKEPIQFDVYGCSIDAFSCYSVSQYDEPVGSSTTVP
GTPLGEGERVNLIRPSAASFGIHFNLSAGAIVSISEVEIFVQTPDATPTP
APFVPTPETEAPVYSWMSGDDSDDDYVWANDDDDATGVNVSSDDDNLVDD
SSSSTANDDGPAIGLPSSTADDADDAADIEDFGNGALARGGVCSRQGLVG
AVAVGAIFISFAANAM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf