prot_Ecto-sp8_S_contig10265.443.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10265.443.1
Unique Nameprot_Ecto-sp8_S_contig10265.443.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length105
Homology
BLAST of mRNA_Ecto-sp8_S_contig10265.443.1 vs. uniprot
Match: D8LJH8_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH8_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 5.380e-62
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0
Query:    1 SAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLRNEVMIRR 105
            SAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQVEALSPGLLGRAPLLKAKQGFAASYCG TMRGQMSRGGHVNRVPFISGSEYPDELHLLLRNEVMIRR
Sbjct:  387 SAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQVEALSPGLLGRAPLLKAKQGFAASYCGGTMRGQMSRGGHVNRVPFISGSEYPDELHLLLRNEVMIRR 491          
BLAST of mRNA_Ecto-sp8_S_contig10265.443.1 vs. uniprot
Match: A0A2C9VPB2_MANES (Uncharacterized protein n=3 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9VPB2_MANES)

HSP 1 Score: 78.6 bits (192), Expect = 8.920e-15
Identity = 48/103 (46.60%), Postives = 65/103 (63.11%), Query Frame = 0
Query:    3 QSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLRNEVMIRR 105
            +S ++    +VA + KRVV+LSGTPSLS+P+D+F+Q+  L PGLLG++     K  FA +YC A  R Q S G H     F  G    +EL++LLR  VMIRR
Sbjct:  331 ESNEIKAVLEVAAKVKRVVLLSGTPSLSRPYDIFHQINMLWPGLLGQS-----KYDFAKTYC-AVKRVQTSEGKHFQ--DFSKGIRL-EELNMLLRQTVMIRR 424          
BLAST of mRNA_Ecto-sp8_S_contig10265.443.1 vs. uniprot
Match: A0A5B8MJL2_9CHLO (SNF2-like DNA helicase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MJL2_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 3.080e-14
Identity = 43/102 (42.16%), Postives = 63/102 (61.76%), Query Frame = 0
Query:    4 SQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLRNEVMIRR 105
            S+Q    + V  +  + ++L+GTPSLSKP+DLF Q EALSPGLLG     K+KQ ++ +YC  T     S+   ++    +SG    +EL++LL N +MIRR
Sbjct:  332 SKQTEAAQMVVRKTPKAILLTGTPSLSKPYDLFAQAEALSPGLLG-----KSKQEYSKNYCERTFVKTRSKATFMS----VSGGRRLEELNVLLNNTIMIRR 424          
BLAST of mRNA_Ecto-sp8_S_contig10265.443.1 vs. uniprot
Match: I0YNI1_COCSC (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YNI1_COCSC)

HSP 1 Score: 75.9 bits (185), Expect = 7.880e-14
Identity = 43/89 (48.31%), Postives = 53/89 (59.55%), Query Frame = 0
Query:   17 AKRVVMLSGTPSLSKPFDLFNQVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLRNEVMIRR 105
            A R V+LSGTPSLS+P+DLF QV+AL PGLLG       ++ FA  YC   +     RGG        +G  Y  ELH LL+ EVM+RR
Sbjct:  380 AARAVLLSGTPSLSRPYDLFRQVDALRPGLLG-----PNREAFAHRYCNRRLVPVFGRGGAQRMKWCNTGLAYAAELHALLKQEVMLRR 463          
BLAST of mRNA_Ecto-sp8_S_contig10265.443.1 vs. uniprot
Match: A0A7S3UFA5_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UFA5_9CHLO)

HSP 1 Score: 75.1 bits (183), Expect = 1.470e-13
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    1 SAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLRNEVMIRR 105
            S+ +++V V      +++RVV+L+GTPSLS+PFD+F QV+ L PGLLG  P     + F  +YC     G+       N+    SGS Y +ELH+LLR  VMIRR
Sbjct:  462 SSLAEEVEVTASALRKSRRVVLLTGTPSLSRPFDIFLQVDLLWPGLLGCHP-----RDFGKAYCSLRWVGKED-----NKHIQTSGSLYLNELHILLRETVMIRR 556          
BLAST of mRNA_Ecto-sp8_S_contig10265.443.1 vs. uniprot
Match: A0A7S0D381_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D381_MICPS)

HSP 1 Score: 70.9 bits (172), Expect = 1.990e-13
Identity = 44/87 (50.57%), Postives = 53/87 (60.92%), Query Frame = 0
Query:   19 RVVMLSGTPSLSKPFDLFNQVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLRNEVMIRR 105
            R V+ +GTPSL+KPFDLFNQV+AL PGLLG +     K+ FA +YC   +    S G   +R    SG     ELH LL  EVMIRR
Sbjct:   14 RAVLCTGTPSLTKPFDLFNQVDALRPGLLGAS-----KRAFAETYCDLKLVSTTS-GPSYDR----SGGSRLQELHALLTKEVMIRR 90          
BLAST of mRNA_Ecto-sp8_S_contig10265.443.1 vs. uniprot
Match: A0A8J9SAP0_9CHLO (Probable SWI/SNF-related matrix-associated actin-dependent rregulator of chromatin n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SAP0_9CHLO)

HSP 1 Score: 74.7 bits (182), Expect = 2.020e-13
Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 0
Query:   17 AKRVVMLSGTPSLSKPFDLFNQVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLRNEVMIRR 105
            A R V+LSGTP LS+P+DLF QV+AL PGLLGR      ++ FA  YC   +   + RGG  +     +G  +  ELH LL+ EVM+RR
Sbjct:  720 AARAVLLSGTPLLSRPYDLFRQVDALRPGLLGRD-----RESFAHRYCNRRLIPVVGRGGAPHMKWCNTGLAHAAELHALLKQEVMLRR 803          
BLAST of mRNA_Ecto-sp8_S_contig10265.443.1 vs. uniprot
Match: A0A835XVZ9_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XVZ9_9CHLO)

HSP 1 Score: 73.9 bits (180), Expect = 3.820e-13
Identity = 50/117 (42.74%), Postives = 58/117 (49.57%), Query Frame = 0
Query:   10 CRQVAGRAKRVVMLSGTPSLSKPFDLFNQVEALSPGLLGRAPLLKAKQGFAASYCGATM-----RGQMSRGGHVNRVPFI----------------SGSEYPDELHLLLRNEVMIRR 105
            C    GRA+R V+LSGTPSLS+P+DL+ QV AL PGLLG +     KQ FA  YC   M      G  +RGG   R                    SG     ELH LL  EVM+RR
Sbjct: 1129 CCAAVGRARRAVLLSGTPSLSRPYDLYRQVHALQPGLLGAS-----KQAFALRYCDGRMVPHRLPGGAARGGWGGRXXXXXXXXEAGAPVRKRLETSGGSRLCELHGLLTREVMVRR 1240          
BLAST of mRNA_Ecto-sp8_S_contig10265.443.1 vs. uniprot
Match: A0A3M7L3P7_AUXPR (Helicase C-terminal domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7L3P7_AUXPR)

HSP 1 Score: 73.6 bits (179), Expect = 4.660e-13
Identity = 43/93 (46.24%), Postives = 54/93 (58.06%), Query Frame = 0
Query:   13 VAGRAKRVVMLSGTPSLSKPFDLFNQVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLRNEVMIRR 105
            VA RA+R + L+GTPSLSKP+DLF QV+AL  G+LG       +Q +A  YC   +     RGG        SG    +ELH LLR  VM+RR
Sbjct:   35 VAKRAQRAIFLTGTPSLSKPYDLFRQVDALRQGMLG-----DTRQQYAGLYCARRIVRSRIRGGEETTHVDNSGLRRAEELHRLLRYAVMLRR 122          
BLAST of mRNA_Ecto-sp8_S_contig10265.443.1 vs. uniprot
Match: UPI000B78D51D (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B78D51D)

HSP 1 Score: 73.6 bits (179), Expect = 4.870e-13
Identity = 45/103 (43.69%), Postives = 63/103 (61.17%), Query Frame = 0
Query:    3 QSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQVEALSPGLLGRAPLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLRNEVMIRR 105
            +S ++    +VA + KR+V+LSGTPSLS+P+D+F+Q+  L PGLLG+      K  FA +YC A    + S G H     F  G    +EL++LLR  VMIRR
Sbjct:  331 ESSEIKAVLEVAAKVKRIVLLSGTPSLSRPYDIFHQINILWPGLLGQT-----KYDFAKTYC-AVKYVRTSEGKHFQ--DFSKGIRL-EELNMLLRQTVMIRR 424          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10265.443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJH8_ECTSI5.380e-6299.05Helicase ATP-binding domain-containing protein n=1... [more]
A0A2C9VPB2_MANES8.920e-1546.60Uncharacterized protein n=3 Tax=Manihot esculenta ... [more]
A0A5B8MJL2_9CHLO3.080e-1442.16SNF2-like DNA helicase n=3 Tax=Chloropicon primus ... [more]
I0YNI1_COCSC7.880e-1448.31p-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3UFA5_9CHLO1.470e-1343.81Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A7S0D381_MICPS1.990e-1350.57Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A8J9SAP0_9CHLO2.020e-1347.19Probable SWI/SNF-related matrix-associated actin-d... [more]
A0A835XVZ9_9CHLO3.820e-1342.74Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A3M7L3P7_AUXPR4.660e-1346.24Helicase C-terminal domain-containing protein n=2 ... [more]
UPI000B78D51D4.870e-1343.69SWI/SNF-related matrix-associated actin-dependent ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..80
e-value: 4.6E-5
score: 25.0
NoneNo IPR availablePANTHERPTHR45766FAMILY NOT NAMEDcoord: 2..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10265contigEcto-sp8_S_contig10265:1002..2742 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10265.443.1mRNA_Ecto-sp8_S_contig10265.443.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10265 1002..2743 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10265.443.1 ID=prot_Ecto-sp8_S_contig10265.443.1|Name=mRNA_Ecto-sp8_S_contig10265.443.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=105bp
SAQSQQVTVCRQVAGRAKRVVMLSGTPSLSKPFDLFNQVEALSPGLLGRA
PLLKAKQGFAASYCGATMRGQMSRGGHVNRVPFISGSEYPDELHLLLRNE
VMIRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038718SNF2-like_sf