prot_Ecto-sp8_S_contig10208.341.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10208.341.1
Unique Nameprot_Ecto-sp8_S_contig10208.341.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length134
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10208.341.1 vs. uniprot
Match: A0A6H5JQT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT1_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 5.600e-58
Identity = 114/133 (85.71%), Postives = 114/133 (85.71%), Query Frame = 0 
Query:    1 MANRRARPSLLLPAWRAVGFAVGTGATALLPAEASAKVGAAISRAVLEHYDENIRAMYDARIVAEEHEVKELFKAQRDEPSRAALSPGAGAGXXXXXXXXXDSGESADDARSMAVAGTLKSALRAACTVTAKI 133
            MANRRARPSLLLPAWRAVGFAVGTGATALLPAE SAKVGAAISRAVLEHYDENIRAMYDARIV EE EVKELFKAQRDE SR ALS GAG G    XXXXX        ARSMAVAGTLKSALRAACTVTAKI
Sbjct:   83 MANRRARPSLLLPAWRAVGFAVGTGATALLPAETSAKVGAAISRAVLEHYDENIRAMYDARIVNEEQEVKELFKAQRDELSRVALSSGAGPGAGGTXXXXXXXXXXXXXARSMAVAGTLKSALRAACTVTAKI 215
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BLAST of mRNA_Ecto-sp8_S_contig10208.341.1 vs. uniprot
Match: D7FX83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX83_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 2.480e-36
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 0 
Query:    1 MANRRARPSLLLPAWRAVGFAVGTGATALLPAEASAKVGAAISRAVLEHYDENIRAMYDARIVAEEHEVK 70
            MANRRARPSLLLPAWRAVGFAVGTGATALLPA+ASAKVGAAISRAVLEHYDENIRAMYDARIVAEEHE +
Sbjct:    1 MANRRARPSLLLPAWRAVGFAVGTGATALLPADASAKVGAAISRAVLEHYDENIRAMYDARIVAEEHEAR 70
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BLAST of mRNA_Ecto-sp8_S_contig10208.341.1 vs. uniprot
Match: H3A8N6_LATCH (5-demethoxyubiquinone hydroxylase, mitochondrial n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3A8N6_LATCH)

HSP 1 Score: 50.8 bits (120), Expect = 6.900e-5
Identity = 31/79 (39.24%), Postives = 44/79 (55.70%), Query Frame = 0 
Query:    1 MANRRARPSLLLPAWRAVGFAVGTGATALLPAEASAKVGAAISRAVLEHYDENIRAMYDARIVAEEHEVKELFKAQRDE 79
            M   R RP++LLP W  VGFA+G G TALL  E +     A+  ++ EHY+  IR + +     +  E+ E+ K  RDE
Sbjct:  108 MVEHRVRPTILLPFWNVVGFALGAG-TALLGKEGAMACTVAVEESISEHYNNQIRTLMEED-PEKYKELLEMIKKFRDE 184
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10208.341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JQT1_9PHAE5.600e-5885.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX83_ECTSI2.480e-3695.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
H3A8N6_LATCH6.900e-539.245-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011566Ubiquinone biosynthesis protein Coq7PFAMPF03232COQ7coord: 2..79
e-value: 5.8E-12
score: 45.7
IPR011566Ubiquinone biosynthesis protein Coq7PANTHERPTHR11237COENZYME Q10 BIOSYNTHESIS PROTEIN 7coord: 2..79
NoneNo IPR availablePANTHERPTHR11237:SF45-DEMETHOXYUBIQUINONE HYDROXYLASE, MITOCHONDRIALcoord: 2..79
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..133
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..36
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.512

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10208contigEcto-sp8_S_contig10208:1368..2522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10208.341.1mRNA_Ecto-sp8_S_contig10208.341.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10208 1355..3101 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10208.341.1 ID=prot_Ecto-sp8_S_contig10208.341.1|Name=mRNA_Ecto-sp8_S_contig10208.341.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=134bp
MANRRARPSLLLPAWRAVGFAVGTGATALLPAEASAKVGAAISRAVLEHY
DENIRAMYDARIVAEEHEVKELFKAQRDEPSRAALSPGAGAGAGGADDDA
DDSGESADDARSMAVAGTLKSALRAACTVTAKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011566Ubq_synth_Coq7