mRNA_Ecto-sp8_S_contig10295.485.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10295.485.1
Unique NamemRNA_Ecto-sp8_S_contig10295.485.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: A0A835YPZ9_9STRA (DMC1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ9_9STRA)

HSP 1 Score: 341 bits (875), Expect = 2.490e-114
Identity = 167/271 (61.62%), Postives = 212/271 (78.23%), Query Frame = 1
Query:    7 VAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATVKPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITDTD 819
            VAKI   A KVD      +F++G++ R  R  VIK+ TGS  LD +LGGG+ETGSITEF+GEFR+GKTQ+ HTL VT+QL  +SGG  GRVV++DTE NFRPER+E IAERFG+D  E LEN+   +  +HEQQ+D  H++  L    GPIR++IVDS+I LFR DFSGRG+L+ RQQKL +H++SL  +A + N AVV++NQ M+DPGA++MFATVKPVGGHV+AHASTTRV LKKGRGEER+AK+ DSP MPEAE  F+I++GGITD +
Sbjct:   77 VAKILETARKVDPRAGI-IFRSGIEARDERRNVIKITTGSAGLDGILGGGVETGSITEFYGEFRTGKTQMMHTLAVTAQLDIQSGGGAGRVVFIDTENNFRPERIENIAERFGIDGNEVLENIFHCQPQSHEQQMDFVHAVGPLATENGPIRLVIVDSIITLFRTDFSGRGELAERQQKLNKHMTSLKNIAREFNAAVVIINQVMADPGAISMFATVKPVGGHVVAHASTTRVMLKKGRGEERIAKICDSPLMPEAEATFRISDGGITDPE 346          
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: A0A4D9CQI8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQI8_9STRA)

HSP 1 Score: 335 bits (858), Expect = 1.010e-111
Identity = 166/272 (61.03%), Postives = 214/272 (78.68%), Query Frame = 1
Query:    1 ATVAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFA-TVKPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITD 813
            A V KI+ +A K+ T G+S  F+TG + R+ R++ IK+ TG+K  DA+LGGG+E+GSITE +GEFR+GKTQL HTL VT QL  + GG +G+ +Y+DTEGNFRPER+E IA+RFGLD   TL+N+IV R +  +QQ +    +AAL    GP R++I+DS+IALFRVD+SGRG+LS RQQKLG+HLS+L ++A D+N+AV LVNQC +DPGAM++FA  VKPVGG+VLAHAS TR+HLKKGR   RVAK+ DSPSMPEAE  F IT+GGI D
Sbjct:   77 AKVEKIRSSARKL-TGGTSHPFRTGTEVREQRKRCIKITTGAKTFDAILGGGVESGSITEAYGEFRTGKTQLSHTLAVTCQLGFDQGGGQGKCIYLDTEGNFRPERIEKIADRFGLDADATLDNIIVARAYASDQQCELLKPLAALIAEHGPFRMLIIDSIIALFRVDYSGRGELSERQQKLGQHLSALTRLAEDMNIAVFLVNQCTADPGAMSLFAPVVKPVGGNVLAHASCTRIHLKKGRENCRVAKVVDSPSMPEAEAQFAITDGGIAD 347          
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: M3JBG1_CANMX (Meiotic recombination protein DLH1 n=1 Tax=Candida maltosa (strain Xu316) TaxID=1245528 RepID=M3JBG1_CANMX)

HSP 1 Score: 308 bits (789), Expect = 1.370e-101
Identity = 160/273 (58.61%), Postives = 199/273 (72.89%), Query Frame = 1
Query:    7 VAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV---KPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITDT 816
            V KI+ AA K+ + G    F +     + R  V  + TGSKQ D +LGGGI++ SITE FGEFR GKTQLCHTLCVT+QL K+ GG EGRV ++DTEG FRPER+ +IAERFG+DP   LEN+   R  N E QI+    + +  L+EG  R++IVDS++A FRVDFSGRG+L+ RQQKL +HLS+L ++A D NVAV L NQ  SDPGA A+FA     KPVGGHVLAHAS TR+ L+KGRGEERVAKL DSP+MPE EC + I++GGI D+
Sbjct:   56 VEKIKEAAGKLKSVG----FISATSVAELRNNVFNITTGSKQFDEVLGGGIQSMSITEVFGEFRCGKTQLCHTLCVTAQLPKDMGGGEGRVAFIDTEGTFRPERIRSIAERFGVDPDTCLENISYARALNSEHQIELVEQLGSE-LSEGTFRLLIVDSIMACFRVDFSGRGELNERQQKLNQHLSNLTRVAEDYNVAVFLTNQVQSDPGASALFAGADGRKPVGGHVLAHASATRILLRKGRGEERVAKLQDSPNMPERECVYVISDGGIKDS 323          
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: B6K203_SCHJY (RecA family ATPase Dmc1 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K203_SCHJY)

HSP 1 Score: 306 bits (785), Expect = 7.940e-101
Identity = 155/273 (56.78%), Postives = 205/273 (75.09%), Query Frame = 1
Query:    1 ATVAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV--KPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITD 813
            A V K++ AA+K+  +     F T ++  Q+R++V  + TGSK  DA+LGGG+++ SITE FGEFR GKTQ+ HTLCVT+QL +E GGAEG+V ++DTEG FRP+R+ AIAERFG+D  + +EN+IV+R +N EQQ+D    +A +   +G  R++IVDS++ALFRVDFSGRG+LS RQQKL   L+ L  ++ + NVAV + NQ  +DPGA  MFA+   KPVGGHV+AHAS TR+ L+KGRGEERVAKL DSP MPEAEC + IT+GGI D
Sbjct:   66 AKVDKLKEAASKLCPAN----FATAMEISQSRKRVWSISTGSKAFDAMLGGGVQSMSITEVFGEFRCGKTQMSHTLCVTAQLPREMGGAEGKVAFIDTEGTFRPDRIRAIAERFGVDADQAMENIIVSRAYNSEQQMDYITKLATIFAEDGRYRLLIVDSIMALFRVDFSGRGELSERQQKLNIMLARLNHISEEFNVAVFVTNQVQADPGAALMFASNDRKPVGGHVMAHASATRILLRKGRGEERVAKLNDSPDMPEAECSYVITSGGIAD 334          
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: A0A1U7LN42_NEOID (Meiotic recombination protein dmc1 n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LN42_NEOID)

HSP 1 Score: 304 bits (779), Expect = 6.230e-100
Identity = 161/274 (58.76%), Postives = 199/274 (72.63%), Query Frame = 1
Query:    1 ATVAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTE-GPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFAT--VKPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITD 813
            A V K++ AA+K+  +G    F T      AR +VI + TGSKQ DA+LGGGI + SI+E +GEFR GKTQLCHTLCVTSQL KE GG EG+V Y+DTEG FRP+R+ AIAERFG+D  + LEN++V R +N E Q+D  + ++     E G  ++IIVDS++ALFRVD+SGRG+LS RQQKL   LS L +M+ + NVAV L NQ  SDPGA  MFA+   KPVGGHVLAHAS TR+ L+KGRGEERVAKL DSP M E EC + I  GGI+D
Sbjct:   64 AKVEKLKEAASKLCPAG----FSTASTISHARRRVISISTGSKQFDAILGGGIMSMSISEVYGEFRCGKTQLCHTLCVTSQLPKEMGGGEGKVAYIDTEGTFRPDRIRAIAERFGVDAEQALENIVVGRAWNSEHQLDLINRLSTTFTEEKGVYKLIIVDSIMALFRVDYSGRGELSERQQKLNVMLSRLSRMSEEFNVAVFLTNQVQSDPGASLMFASNDKKPVGGHVLAHASATRIMLRKGRGEERVAKLLDSPDMAEKECSYCILAGGISD 333          
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: A0A8J5USH7_9ASCO (AAA domain-containing protein n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5USH7_9ASCO)

HSP 1 Score: 302 bits (773), Expect = 3.420e-99
Identity = 155/274 (56.57%), Postives = 198/274 (72.26%), Query Frame = 1
Query:    7 VAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV---KPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITDTD 819
            V KI+ +A+K+ T G    F +     + R K   + TGSKQ D +LGGGI++ S+TE FGEFR GKTQLCHTLCVT+QL +E GG EGRV Y+DTEG FRPER+++IAERFG+DP   L+N+   R  N E QI+    +    L++G  R++IVDS++A FRVD+SGRG+L+ RQQKL +HLS L ++A D N+AV L NQ  SDPGA ++FA     KPVGGHVLAHAS TR+ L+KGRGEERVAKL DSP+MPE EC + I  GGI D++
Sbjct:   55 VDKIKESASKLKTVG----FVSATIVAELRTKTFNLSTGSKQFDEILGGGIQSMSLTEVFGEFRCGKTQLCHTLCVTAQLPREMGGGEGRVAYIDTEGTFRPERIKSIAERFGVDPEACLDNISYARALNSEHQIELVEQLGNQ-LSDGCFRLLIVDSIMACFRVDYSGRGELNERQQKLNQHLSGLTRIAEDYNIAVFLTNQVQSDPGASSLFAAADGRKPVGGHVLAHASATRILLRKGRGEERVAKLQDSPNMPERECVYVIGEGGIKDSE 323          
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: D8LZN5_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LZN5_BLAHO)

HSP 1 Score: 299 bits (766), Expect = 1.420e-98
Identity = 150/276 (54.35%), Postives = 203/276 (73.55%), Query Frame = 1
Query:   22 LAAAKVD-------TSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEG-PIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFA--TVKPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITDTD 819
            L+ AKVD       T  S+G+F TG +  Q R++VIK+ TGS  LD LLGGGIET SITE FGEFR+GKTQL HTLCVT+QL  E  GA G+V+++DTEG FRP+RV  IA R+GL+  E L+N+++ R + HEQQ+D   + AA  + +  P  +++VDS+ ALFRVD+SGRG+L+ RQQKLGRHLS+L ++A + NVAVV++NQ  +DPGA AMF   T KP+GG+++AHASTTR++ KKG+GE+R+ K++DSP + E E  F I   G+ + D
Sbjct:   16 LSEAKVDKIMQACRTMQSTGIFYTGREMMQLRQRVIKITTGSSDLDTLLGGGIETMSITEIFGEFRTGKTQLAHTLCVTAQLPSEMHGANGKVIFLDTEGTFRPQRVVEIAGRYGLNGDEVLDNILLARAYTHEQQMDVITAAAAKIVEDNSPYHLLVVDSITALFRVDYSGRGELAERQQKLGRHLSALKKLAEEFNVAVVIINQVTADPGAAAMFVKDTKKPIGGNIIAHASTTRLYFKKGKGEQRICKVYDSPDLAENEATFAIGPQGVMNAD 291          
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: DLH1_CANAX (Meiotic recombination protein DLH1 n=7 Tax=Candida TaxID=1535326 RepID=DLH1_CANAX)

HSP 1 Score: 300 bits (768), Expect = 2.020e-98
Identity = 157/274 (57.30%), Postives = 193/274 (70.44%), Query Frame = 1
Query:    7 VAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV---KPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITDTD 819
            V KI+ AA K+   G    F       ++R KV  + TGSKQ D +LGGGI++ SITE FGEFR GKTQLCHTLCV +QL  + GG EGRV Y+DTEG FRP+R+ +IAER+G+D    LEN+   R  N E QI+    +    L EG  R++IVDS++A FRVD+SGRG+L+ RQQKL +HLS+L ++A D N+AV L NQ  SDPGA A+FA     KPVGGHVLAHAS TR+ L+KGRGEERVAKL DSP+MPE EC + I  GGI DTD
Sbjct:   56 VEKIKEAAGKIKKYG----FLPATIVAESRTKVFHITTGSKQFDEILGGGIQSMSITEVFGEFRCGKTQLCHTLCVAAQLPTDMGGGEGRVAYIDTEGTFRPDRIRSIAERYGVDADICLENISYARALNSEHQIELVEQLGNE-LAEGTFRLLIVDSIMACFRVDYSGRGELNERQQKLNQHLSNLTRVAEDYNIAVFLTNQVQSDPGASALFAAADGRKPVGGHVLAHASATRILLRKGRGEERVAKLQDSPNMPEKECVYVIGEGGIKDTD 324          
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: A0A1J4KIK7_9EUKA (Meiotic recombination protein DMC1 like protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KIK7_9EUKA)

HSP 1 Score: 300 bits (769), Expect = 2.110e-98
Identity = 150/272 (55.15%), Postives = 199/272 (73.16%), Query Frame = 1
Query:    1 ATVAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATVKPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITDT 816
            A V KI  AA  +DTS S   F +G +C   R++VI + TGS +LD LLGGGIE+ SITE FGEFR+GKTQLCHTLCVTSQL    GG  G+VVY+DTEG FRPER+  IA RFG+DP E L+N++  R F HEQQ+       A  + E   R++I+DS+ ALFRVDFSGRG+L+ RQQ LG+ +S+L ++AS+ NVA+ + NQ M+ P +       KP+GGH+LAHASTTR++L+KG+G ERVAK++DSPS+PEAE  +++++ GI D+
Sbjct:   67 AKVDKIIAAATSLDTSFS---FMSGNECLNRRQRVIHITTGSSELDKLLGGGIESMSITEVFGEFRTGKTQLCHTLCVTSQLPINQGGGAGKVVYIDTEGTFRPERIPTIAARFGVDPNEVLDNILYARAFTHEQQMQLILQATAQ-MAEDQYRLMIIDSITALFRVDFSGRGELAERQQTLGQMMSALSKVASEFNVAIFITNQVMASPDSALFVQAPKPIGGHILAHASTTRLYLRKGKGAERVAKIYDSPSLPEAEATYELSDTGIIDS 334          
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: G8XZS9_PICSO (Piso0_005731 protein n=2 Tax=Pichia sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 / NRRL Y-12695) TaxID=559304 RepID=G8XZS9_PICSO)

HSP 1 Score: 299 bits (766), Expect = 3.810e-98
Identity = 153/271 (56.46%), Postives = 194/271 (71.59%), Query Frame = 1
Query:   16 IQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV---KPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITDTD 819
            ++L  A V +   SG     +Q  + R +   + TGS QLD +LGGGI + S+TE FGEFR GKTQLCHTLCVT+QL +  GGAEG+V Y+DTEG FRP+R+ AIAERF +DP   LEN+   R  N E Q + +  +    L +G  R++IVDS++ALFRVD+SGRG+L+ RQQKL +HLS+L+++A D NVAV L NQ  SDPGA A+FA+    KPVGGH+LAHAS TR+ L+KGRGEERVAKL DSP MPE EC + I  GGI D+D
Sbjct:   54 LKLRGAGVCSIAHSGFIPATIQA-ELRNRAYSISTGSNQLDDVLGGGIMSMSLTEVFGEFRCGKTQLCHTLCVTAQLPRSMGGAEGKVAYIDTEGTFRPDRIRAIAERFEVDPDACLENISYARALNSEHQTELSEQLGVQ-LADGSYRLLIVDSIMALFRVDYSGRGELNDRQQKLNQHLSALIRLAEDYNVAVFLTNQVQSDPGASALFASADGRKPVGGHILAHASATRILLRKGRGEERVAKLQDSPDMPERECVYVIGEGGIKDSD 322          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YPZ9_9STRA2.490e-11461.62DMC1-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
A0A4D9CQI8_9STRA1.010e-11161.03Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
M3JBG1_CANMX1.370e-10158.61Meiotic recombination protein DLH1 n=1 Tax=Candida... [more]
B6K203_SCHJY7.940e-10156.78RecA family ATPase Dmc1 n=1 Tax=Schizosaccharomyce... [more]
A0A1U7LN42_NEOID6.230e-10058.76Meiotic recombination protein dmc1 n=1 Tax=Neolect... [more]
A0A8J5USH7_9ASCO3.420e-9956.57AAA domain-containing protein n=1 Tax=[Candida] su... [more]
D8LZN5_BLAHO1.420e-9854.35Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
DLH1_CANAX2.020e-9857.30Meiotic recombination protein DLH1 n=7 Tax=Candida... [more]
A0A1J4KIK7_9EUKA2.110e-9855.15Meiotic recombination protein DMC1 like protein n=... [more]
G8XZS9_PICSO3.810e-9856.46Piso0_005731 protein n=2 Tax=Pichia sorbitophila (... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10295contigEcto-sp8_S_contig10295:1..5665 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeFungi
Stop1
Start0
Seed ortholog score305.8
Seed ortholog evalue2e-80
Seed eggNOG ortholog5479.M3JBG1
Model size822
KEGG koko:K10872,ko:K14545
KEGG Pathwayko03008,ko04113,map03008,map04113
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000018,GO:0000150,GO:0000166,GO:0000217,GO:0000228,GO:0000280,GO:0000400,GO:0000709,GO:0000724,GO:0000725,GO:0000730,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006311,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007129,GO:0007130,GO:0007131,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010520,GO:0010564,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022402,GO:0022414,GO:0022607,GO:0030554,GO:0031323,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0033043,GO:0033554,GO:0034622,GO:0034641,GO:0035639,GO:0035822,GO:0035825,GO:0036094,GO:0040020,GO:0042148,GO:0042623,GO:0042802,GO:0043142,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044877,GO:0045003,GO:0045132,GO:0045143,GO:0046483,GO:0048285,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051128,GO:0051171,GO:0051259,GO:0051260,GO:0051276,GO:0051321,GO:0051445,GO:0051716,GO:0051726,GO:0051783,GO:0060255,GO:0060631,GO:0061982,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070192,GO:0070193,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090735,GO:0097159,GO:0097367,GO:0098813,GO:0140013,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1903046,GO:1905334,GO:2000241
Exons6
EggNOG free text desc.Belongs to the RecA family
EggNOG OGs39J83@33154,3NVB0@4751,3QMII@4890,3RT6I@4891,47APH@766764,COG0468@1,KOG1434@2759
Ec32 ortholog descriptionMeiotic recombination protein DMC1/LIM15 homolog
Ec32 orthologEc-24_003430.1
Cds size822
COG Functional cat.L
Best tax levelDebaryomycetaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10295.485.1prot_Ecto-sp8_S_contig10295.485.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10295 1..5665 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143128.1863647-CDS-Ecto-sp8_S_contig10295:0..1111681143128.1863647-CDS-Ecto-sp8_S_contig10295:0..111Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10295 1..111 +
1681143128.1972697-CDS-Ecto-sp8_S_contig10295:1419..15841681143128.1972697-CDS-Ecto-sp8_S_contig10295:1419..1584Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10295 1420..1584 +
1681143128.2068157-CDS-Ecto-sp8_S_contig10295:2788..29351681143128.2068157-CDS-Ecto-sp8_S_contig10295:2788..2935Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10295 2789..2935 +
1681143128.2168095-CDS-Ecto-sp8_S_contig10295:4111..42701681143128.2168095-CDS-Ecto-sp8_S_contig10295:4111..4270Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10295 4112..4270 +
1681143128.2264204-CDS-Ecto-sp8_S_contig10295:4785..49261681143128.2264204-CDS-Ecto-sp8_S_contig10295:4785..4926Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10295 4786..4926 +
1681143128.236089-CDS-Ecto-sp8_S_contig10295:5566..56651681143128.236089-CDS-Ecto-sp8_S_contig10295:5566..5665Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10295 5567..5665 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10295.485.1

>prot_Ecto-sp8_S_contig10295.485.1 ID=prot_Ecto-sp8_S_contig10295.485.1|Name=mRNA_Ecto-sp8_S_contig10295.485.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=274bp
ATVAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLG
GGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEG
NFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTE
GPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAV
VLVNQCMSDPGAMAMFATVKPVGGHVLAHASTTRVHLKKGRGEERVAKLF
DSPSMPEAECPFKITNGGITDTD*
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mRNA from alignment at Ecto-sp8_S_contig10295:1..5665+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10295.485.1 ID=mRNA_Ecto-sp8_S_contig10295.485.1|Name=mRNA_Ecto-sp8_S_contig10295.485.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5665bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10295:1..5665+ (Ectocarpus species8 EcLAC_412)
GCCACTGTCGCCAAGATCCAGCTTGCCGCGGCCAAGGTGGACACTTCTGG TTCGTCGGGCATGTTCAAGACGGGACTTCAGTGCCGGCAAGCCCGAGAGA AAGTTATCAAGGTGACAAGTTCAAACAGCGCTTGGGCGATCTCTCCAATG TCTGCTGTGTGTTCGGAAGGAGATGCGGTTGTTCTACCAACTTCGAACAA ATGTGGAAGCCAATGCTCACTATGTTATTTTTCGATACCCGTGCGTTAGA CCCGGTCAAGGGGAACGAAGGAAGGGATATGGAGTAAGAATGAATTTTTC ATACTCGAAGGATGCTATTGGGTCATAATGACCTCCCAATTTAACGCAAT CCCAAGCGGGTGGCACGGAACCCCAAGCATGGTTAGTGTCTGTTGAGGAT ACAATGGCTGAAGAACAGTGCAATACATGGTGCATCAGGTTCGCATCGTT GGGCGATTCACTCTGTGTGCCAAACATTCAAATGGAATCATGGAAACCAG GCATAATTGGTGGCCAACATGATTTGGGGAGGCCAGGCAATAGATGAACG TTCAATTCGCCTGTCGCTCGGGTAGCCGTACTGTCTTGCGTCCAACACCA GCTCTCAGGGTAATTGTCAGTATTTCAGATATAAAGACCAACCTCGGTCG AACGGCCGGATTCCTTCGGAAATGCTATCCCTCATCAACATTTGACGAGC AACATTAAACATAACATGGCAAGATCGTTCGTTGACTCGTCGTCCATTGT TGCTCTTCGAGTAATTACCTTTCCGCCAAAGACTACGTCAGATGCTTTGC CAATTCAAGACGTACTGTAGAATGATCGAATGCCAAGTCGATGTCAGATG TTGAACGAATGAGAGTGAATGCATGCTTGGTGTCGGTGCACTTTTCGCGA GTGGTGCACGAACCCGGTCTTGCCATTTCGACAGTATATTTGTTCCAGGC TGGGCTGAAGTGCCACGCGCTCTCTAAATGATCTTTGCTTGCACCCCATG AGAAATCTGCACGGCAACCCACTTGCGACTGACTTCAATTCCATCGATCA CACTCATTCTCAACCAAGCACTGAGGTCTCCAATTCGTTGTGGATTGCTG TAGAGTCTTGCGGTCCTCAACATGTGCTGCAAGTTGACAAGAACGTGCTG TACCGCATGATGGTCACTACAATCTGACGTGGTGCTCATTTTGTGACGGA ATAAGGCGAGCAAGCAATTTTGAACGTGCCGGAAAGGCGAACAGTTTCTC CATTGAGGAATAGGAGCGCCGATCCTCCCTCAAGGACCGCGTAGCCAAAG TTCCAGCGACCCCTCGGCAATCAACCCGAGCGAGTACGCTCACCCTGTCC ACCCCCCGCCGACTCCATCTCGACGACGTATCCCCTATCCCCCCCCTCGT TCCCGATCCCGGGGAGCAGGTGCACACCGGTTCGAAGCAGCTGGACGCTC TTCTGGGCGGCGGCATCGAGACCGGCTCCATCACGGAGTTCTTCGGGGAG TTCAGATCCGGCAAGACCCAGCTCTGCCACACCCTGTGTGTCACATCGCA GCTCAGCAAGGAGTCGGGCGGTGCGGAGGGCAGGGTAAGGCCAAGGAGGG GCGTGCAATGTCTACATGCAACAGTTTTATTTCTGTTTTGTCGCCGGTGG TGGTGATGGTGGTTTTAGCGGCAATGCTGTAGATGAGCTCATCGAGGCAA TGCTTTGCTCGTGGTCGTCACACACTGCGCCAAACCAAAGCCGATGGGGA TGGGGGTGCTTGAAACATCTGACCCTACGTTCAAACACGCGTATGTGTTG TAACGCGATCCTCACAAGCTTCAAACGCTTTTGTCGACGAAACCTGGTTC GACAAAGAACCTGTCTCCCTACTGGTCGTTGCTTTTCACGTCAAAATCTG AAAACCTTCGTTTTGGACGAAGCCGACATTGACAAAGAGCGTGCCGGGTT TCGCCTGCACAACGCACCCACAGCTCCACGCTTCACACGCTTTCCCCACT CTTCGGTGGGGAAATCGCGGCAGGGTGAGGCCTTCGGTTTCGACAATTTC GAGTTTTGCGATTGCTGGGCAATCGTTTCAAACGCCGAAAACATCCGCGC ATTCAGACCGCTTTGCTTGAGTTGCATCGAACCAGCGCTGCGCAATCAGG GGCAATGTTGGCCCTCGACGATTACCTCACTCTAATCGAGGCGGTGAAGG TTGAGTACAGAGATATGTTGTATTATTTTTGGTTGTGCCTCTTTTGGAGG TGGTCCCCTGACCAAGGAAAACTAAATCCCTCGCCCTTAACGAGACGTCA GAGAATATAGTTTGCATCATCGTATGTATTCAGTAGAAGGGACCGATTTG CCCCGCAACAACACAAACAACGATAAGACACGAAGGAGGATTAACAGCGC AACCAACGCCGAACTTTTCCGGCTCGAAAGAAGGGACATAGGATATCAGT TTCGAAGTGTCCTGTGTGAAAGCTGGTTGTCGCCCCCCCTCGAAACAGCC GCCTAGAAAACAAGCCTGGTGGGTGCCAATGACCCATAGTTTCAACCCAT GTTCTCGAAACCACGCGACATGCCACCCGGCAGCCCACACCAGGCCGATT ATTCTAGCGTGTCGCCTTCGTTCAGGGACGCGGAGCAGGGGGGCTTCCGG ATAGTTCGATTTCGGAGGATCTCCCCGCTCGTTTCCCCACCTTAGATTCG GCGAACTCATGACAACTACCTCCGCAGCAACAGAATGCGCAACGCCCTGA CAACCGGTTTCACTTTTTTTTTTCATGACGAACACCAGGTTGTTTATATG GACACGGAAGGGAACTTCCGGCCGGAACGCGTGGAGGCCATCGCGGAACG TTTCGGGCTAGACCCCACCGAGACCCTCGAGAACGTGATCGTCACCCGGG TCTTCAACCACGAACAGCAAATAGACCGGGCCCACGTGAGAATATCCGTT GTCAACGTTGGCGTGCTTCAGAATGCCAGGAACGTCAAGACTAGTTCGGA GAGCCAGGTTCCCTTGCGTTTGATGGATGTGCTTGGTAGGTGAGTGTAAA GTCCCTACGGAGGAACATTCCTGCCTTGCCCGTGGGCAACGGTAGCAGGT GTGCTGTAAAGAGGTGCTCAACATGTCGAAGGGACAGAGAAGTCCGATTT TGATCTTTTTTTGCCATAACCAGCCAGTGGTTGTTCTTGTTCTTAATGTA ACCTGTGTGTCCGTGACCATTGTTGTCGATGTTCCTGCCGCCGCTGCGGC TCCTGCAGCGACCCCTCGCATGAACTTCGACCTCTTCGGTCCAGTTTTCC TATCTCCGCTCTGATATTACCAGCAGCGAAGGGAATCCTACCAGCACGGA CATTCCACCAGAAACATCAACCCTAGAGCACACCATAGCATTCCATCAGA CCACAGGGTTACTGCATACAATGGCGTAGGCGAGAGGGAACCTTGATTGC TCAAGGATCTTGTGTCTACCGGCCGCATCGCAATCCTTTTTGGCGGTGGT TTCATCACGCCCAGGTAGATGCCTCAGTCGCTGCGTCTGCCTCCACCTAG ACTGCACTCGCTCAACTTGCTGGCCAAGACAGAACTCACACTACCGCCCT GCCCGTTGAGCTGTCGACAGTGCATACTGTACCCACACAAAGCTTTGGTT GTTGGTGGACCCAGAATCTAACTGTGCCCAATGCCATTGCCAGTGTGCCG TGACCCAACAGGGAAAATTCCTTCCGTGTTCTTCCATTCTGCTACCTCGC TAATTCCTTTCTCTCTAGTACTAGTAGAGTCAGCTCCCGCCAAATCCCCC ACCCCCCCCCCCCCCCCCCCCCCCCCCCCGTGCCACCCGCCACCCCCCCC ACGCACCCAACCCAACCGCGCATCCCCAGCGTGTGGGACNNNNNNNNNNC CCCAACCCCCCCCCCCCCCCCCCGTTGTTTCCCAACACACTACGCAGGCC TCTCGAATCAAACTTTCGGTCGGGGCGATCGCCTGTTATTGTTTTCCTCA ACCCTGAACACTGTCCGCAATGCAGTAGGTGGACTCCACCCCCCCCGTCA CCCAGCAACCCGAAGGAAAACGTCTTGCCTCCCCCTCCCCCTTGAAAAAC GTACTTTTCAGAGCATCGCGGCGCTGTGTCTCACTGAGGGTCCCATCCGA GTGATCATCGTTGACTCCGTCATCGCCCTCTTCCGGGTGGATTTTAGCGG ACGCGGCGACTTGTCCGTGCGGCAGCAAAAGCTCGGCCGGCACCTGTCGA GCTTGCTCCAGATGGCGTCGGTGAGGAATGGCGCTACGCAGCATGAGCGA ACGCTGTATATTGCACATTTTCGCATCAATCGTTTGCCATCGGGCGGTCG TGATGGACGCCATGCTTTCGCCACTGAACACCGGGGACCTTGCGCACAGA ACTGAACCGGCGCACGCTCCCTTGAGAAATGGGGCTGAGAACTCCACGAA GGCAATGAGAATAGGGTTGCCAAACACAGCTCAGCGGTGAACCTTACAAC CAAACTCGTAATGGCAACGGTGGTGACAAACAAGGAATTGAGCCTTGACC TGAATTTGAAGTTTCGTGATGGTTGTGGCCCCATGCCGTTGAAGAAGTTC AACAACTCGTGACCCTTGTGAAGCGGCCGTGCGCCTTGCTCCTAACTTGG TTCGGGGCGTTCTGGTGCTCGCCATCGATGAACGCTCGAACAAGCCCATC TTCGACACAGGAATGCTCGCTCGAAAACCCACCCCCCCCCACCCCTCGCG CTTGATGTCTACGTCTTGGATGTATCGATTGGAAGGACCTGAACGTGGCG GTTGTTCTGGTGAACCAGTGCATGTCAGACCCCGGGGCGATGGCCATGTT CGCCACCGTCAAGCCAGTAGGGGGACACGTCCTAGCCCACGCTAGCACGA CTAGGGTGCACCTCAAGAAGGGCAGGGTAAGCCGGGCATTCCTATTTAGC TGCATCGCAAGGTTGGGTTGTTGTTCAACCGAACCCATCTTGTACGTTGT TCGGCACTATGGTTGTTGTTGACGTGGCGGTTTTTTTTCGGAAGGTTTGT GGTGGTAATGGTGGAGTAGGTGGCTGCAAGAGCATGGTTCGTGTTGGTGA TGTGATGACGTGGTATATCAGGTGTTTATGTCAGCGTTGGTTGATTCTGA GGGATGGTGCTGGTGTTGTTGGTATCGTAGTACAGCGTTCTTCTGAAACA AGTACCAATCTTCCCACTCCTTTAGGTAGGTCAACGAAGCTATTCGTCTG ACCCGCCGCCCACCTAAGAATAAGAAGCAAAGATGAATGCATACCCTGAC TGTCAACACAGCTGAAGTTGCCTTCGGACCCCATGATGTTGTTGGTGGGA ACTGCTCGTTTCGTCTCTTCTCCAACCTATGCCGACAACCAAGGAAATGC GGCTTGTCTATGATCAGTAAGTCACCCGTGAGCGTGGGTAGATGCTGTCC ATCTTGATTCACGTTGTTCACCGGCCTGCCGTTTCGAAGGTAAAAACAAA ATGTTTCCCTGAAGCTTCCCTCGCGTCCGTCGTGCTGCCGGCTTGACGTC GAAATCCCGTCGCCAGGGTGAAGAGCGGGTTGCGAAGCTGTTCGACAGCC CGAGCATGCCAGAGGCAGAATGCCCCTTCAAGATTACCAACGGGGGCATC ACGGACACCGACTGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10295:1..5665+

>mRNA_Ecto-sp8_S_contig10295.485.1 ID=mRNA_Ecto-sp8_S_contig10295.485.1|Name=mRNA_Ecto-sp8_S_contig10295.485.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=822bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10295:1..5665+ (Ectocarpus species8 EcLAC_412)
GCCACTGTCGCCAAGATCCAGCTTGCCGCGGCCAAGGTGGACACTTCTGG
TTCGTCGGGCATGTTCAAGACGGGACTTCAGTGCCGGCAAGCCCGAGAGA
AAGTTATCAAGGTGCACACCGGTTCGAAGCAGCTGGACGCTCTTCTGGGC
GGCGGCATCGAGACCGGCTCCATCACGGAGTTCTTCGGGGAGTTCAGATC
CGGCAAGACCCAGCTCTGCCACACCCTGTGTGTCACATCGCAGCTCAGCA
AGGAGTCGGGCGGTGCGGAGGGCAGGGTTGTTTATATGGACACGGAAGGG
AACTTCCGGCCGGAACGCGTGGAGGCCATCGCGGAACGTTTCGGGCTAGA
CCCCACCGAGACCCTCGAGAACGTGATCGTCACCCGGGTCTTCAACCACG
AACAGCAAATAGACCGGGCCCACAGCATCGCGGCGCTGTGTCTCACTGAG
GGTCCCATCCGAGTGATCATCGTTGACTCCGTCATCGCCCTCTTCCGGGT
GGATTTTAGCGGACGCGGCGACTTGTCCGTGCGGCAGCAAAAGCTCGGCC
GGCACCTGTCGAGCTTGCTCCAGATGGCGTCGGACCTGAACGTGGCGGTT
GTTCTGGTGAACCAGTGCATGTCAGACCCCGGGGCGATGGCCATGTTCGC
CACCGTCAAGCCAGTAGGGGGACACGTCCTAGCCCACGCTAGCACGACTA
GGGTGCACCTCAAGAAGGGCAGGGGTGAAGAGCGGGTTGCGAAGCTGTTC
GACAGCCCGAGCATGCCAGAGGCAGAATGCCCCTTCAAGATTACCAACGG
GGGCATCACGGACACCGACTGA
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