mRNA_Ecto-sp8_S_contig10295.485.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: A0A835YPZ9_9STRA (DMC1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ9_9STRA) HSP 1 Score: 341 bits (875), Expect = 2.490e-114 Identity = 167/271 (61.62%), Postives = 212/271 (78.23%), Query Frame = 1
Query: 7 VAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATVKPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITDTD 819
VAKI A KVD +F++G++ R R VIK+ TGS LD +LGGG+ETGSITEF+GEFR+GKTQ+ HTL VT+QL +SGG GRVV++DTE NFRPER+E IAERFG+D E LEN+ + +HEQQ+D H++ L GPIR++IVDS+I LFR DFSGRG+L+ RQQKL +H++SL +A + N AVV++NQ M+DPGA++MFATVKPVGGHV+AHASTTRV LKKGRGEER+AK+ DSP MPEAE F+I++GGITD +
Sbjct: 77 VAKILETARKVDPRAGI-IFRSGIEARDERRNVIKITTGSAGLDGILGGGVETGSITEFYGEFRTGKTQMMHTLAVTAQLDIQSGGGAGRVVFIDTENNFRPERIENIAERFGIDGNEVLENIFHCQPQSHEQQMDFVHAVGPLATENGPIRLVIVDSIITLFRTDFSGRGELAERQQKLNKHMTSLKNIAREFNAAVVIINQVMADPGAISMFATVKPVGGHVVAHASTTRVMLKKGRGEERIAKICDSPLMPEAEATFRISDGGITDPE 346
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: A0A4D9CQI8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQI8_9STRA) HSP 1 Score: 335 bits (858), Expect = 1.010e-111 Identity = 166/272 (61.03%), Postives = 214/272 (78.68%), Query Frame = 1
Query: 1 ATVAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFA-TVKPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITD 813
A V KI+ +A K+ T G+S F+TG + R+ R++ IK+ TG+K DA+LGGG+E+GSITE +GEFR+GKTQL HTL VT QL + GG +G+ +Y+DTEGNFRPER+E IA+RFGLD TL+N+IV R + +QQ + +AAL GP R++I+DS+IALFRVD+SGRG+LS RQQKLG+HLS+L ++A D+N+AV LVNQC +DPGAM++FA VKPVGG+VLAHAS TR+HLKKGR RVAK+ DSPSMPEAE F IT+GGI D
Sbjct: 77 AKVEKIRSSARKL-TGGTSHPFRTGTEVREQRKRCIKITTGAKTFDAILGGGVESGSITEAYGEFRTGKTQLSHTLAVTCQLGFDQGGGQGKCIYLDTEGNFRPERIEKIADRFGLDADATLDNIIVARAYASDQQCELLKPLAALIAEHGPFRMLIIDSIIALFRVDYSGRGELSERQQKLGQHLSALTRLAEDMNIAVFLVNQCTADPGAMSLFAPVVKPVGGNVLAHASCTRIHLKKGRENCRVAKVVDSPSMPEAEAQFAITDGGIAD 347
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: M3JBG1_CANMX (Meiotic recombination protein DLH1 n=1 Tax=Candida maltosa (strain Xu316) TaxID=1245528 RepID=M3JBG1_CANMX) HSP 1 Score: 308 bits (789), Expect = 1.370e-101 Identity = 160/273 (58.61%), Postives = 199/273 (72.89%), Query Frame = 1
Query: 7 VAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV---KPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITDT 816
V KI+ AA K+ + G F + + R V + TGSKQ D +LGGGI++ SITE FGEFR GKTQLCHTLCVT+QL K+ GG EGRV ++DTEG FRPER+ +IAERFG+DP LEN+ R N E QI+ + + L+EG R++IVDS++A FRVDFSGRG+L+ RQQKL +HLS+L ++A D NVAV L NQ SDPGA A+FA KPVGGHVLAHAS TR+ L+KGRGEERVAKL DSP+MPE EC + I++GGI D+
Sbjct: 56 VEKIKEAAGKLKSVG----FISATSVAELRNNVFNITTGSKQFDEVLGGGIQSMSITEVFGEFRCGKTQLCHTLCVTAQLPKDMGGGEGRVAFIDTEGTFRPERIRSIAERFGVDPDTCLENISYARALNSEHQIELVEQLGSE-LSEGTFRLLIVDSIMACFRVDFSGRGELNERQQKLNQHLSNLTRVAEDYNVAVFLTNQVQSDPGASALFAGADGRKPVGGHVLAHASATRILLRKGRGEERVAKLQDSPNMPERECVYVISDGGIKDS 323
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: B6K203_SCHJY (RecA family ATPase Dmc1 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K203_SCHJY) HSP 1 Score: 306 bits (785), Expect = 7.940e-101 Identity = 155/273 (56.78%), Postives = 205/273 (75.09%), Query Frame = 1
Query: 1 ATVAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV--KPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITD 813
A V K++ AA+K+ + F T ++ Q+R++V + TGSK DA+LGGG+++ SITE FGEFR GKTQ+ HTLCVT+QL +E GGAEG+V ++DTEG FRP+R+ AIAERFG+D + +EN+IV+R +N EQQ+D +A + +G R++IVDS++ALFRVDFSGRG+LS RQQKL L+ L ++ + NVAV + NQ +DPGA MFA+ KPVGGHV+AHAS TR+ L+KGRGEERVAKL DSP MPEAEC + IT+GGI D
Sbjct: 66 AKVDKLKEAASKLCPAN----FATAMEISQSRKRVWSISTGSKAFDAMLGGGVQSMSITEVFGEFRCGKTQMSHTLCVTAQLPREMGGAEGKVAFIDTEGTFRPDRIRAIAERFGVDADQAMENIIVSRAYNSEQQMDYITKLATIFAEDGRYRLLIVDSIMALFRVDFSGRGELSERQQKLNIMLARLNHISEEFNVAVFVTNQVQADPGAALMFASNDRKPVGGHVMAHASATRILLRKGRGEERVAKLNDSPDMPEAECSYVITSGGIAD 334
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: A0A1U7LN42_NEOID (Meiotic recombination protein dmc1 n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LN42_NEOID) HSP 1 Score: 304 bits (779), Expect = 6.230e-100 Identity = 161/274 (58.76%), Postives = 199/274 (72.63%), Query Frame = 1
Query: 1 ATVAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTE-GPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFAT--VKPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITD 813
A V K++ AA+K+ +G F T AR +VI + TGSKQ DA+LGGGI + SI+E +GEFR GKTQLCHTLCVTSQL KE GG EG+V Y+DTEG FRP+R+ AIAERFG+D + LEN++V R +N E Q+D + ++ E G ++IIVDS++ALFRVD+SGRG+LS RQQKL LS L +M+ + NVAV L NQ SDPGA MFA+ KPVGGHVLAHAS TR+ L+KGRGEERVAKL DSP M E EC + I GGI+D
Sbjct: 64 AKVEKLKEAASKLCPAG----FSTASTISHARRRVISISTGSKQFDAILGGGIMSMSISEVYGEFRCGKTQLCHTLCVTSQLPKEMGGGEGKVAYIDTEGTFRPDRIRAIAERFGVDAEQALENIVVGRAWNSEHQLDLINRLSTTFTEEKGVYKLIIVDSIMALFRVDYSGRGELSERQQKLNVMLSRLSRMSEEFNVAVFLTNQVQSDPGASLMFASNDKKPVGGHVLAHASATRIMLRKGRGEERVAKLLDSPDMAEKECSYCILAGGISD 333
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: A0A8J5USH7_9ASCO (AAA domain-containing protein n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5USH7_9ASCO) HSP 1 Score: 302 bits (773), Expect = 3.420e-99 Identity = 155/274 (56.57%), Postives = 198/274 (72.26%), Query Frame = 1
Query: 7 VAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV---KPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITDTD 819
V KI+ +A+K+ T G F + + R K + TGSKQ D +LGGGI++ S+TE FGEFR GKTQLCHTLCVT+QL +E GG EGRV Y+DTEG FRPER+++IAERFG+DP L+N+ R N E QI+ + L++G R++IVDS++A FRVD+SGRG+L+ RQQKL +HLS L ++A D N+AV L NQ SDPGA ++FA KPVGGHVLAHAS TR+ L+KGRGEERVAKL DSP+MPE EC + I GGI D++
Sbjct: 55 VDKIKESASKLKTVG----FVSATIVAELRTKTFNLSTGSKQFDEILGGGIQSMSLTEVFGEFRCGKTQLCHTLCVTAQLPREMGGGEGRVAYIDTEGTFRPERIKSIAERFGVDPEACLDNISYARALNSEHQIELVEQLGNQ-LSDGCFRLLIVDSIMACFRVDYSGRGELNERQQKLNQHLSGLTRIAEDYNIAVFLTNQVQSDPGASSLFAAADGRKPVGGHVLAHASATRILLRKGRGEERVAKLQDSPNMPERECVYVIGEGGIKDSE 323
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: D8LZN5_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LZN5_BLAHO) HSP 1 Score: 299 bits (766), Expect = 1.420e-98 Identity = 150/276 (54.35%), Postives = 203/276 (73.55%), Query Frame = 1
Query: 22 LAAAKVD-------TSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEG-PIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFA--TVKPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITDTD 819
L+ AKVD T S+G+F TG + Q R++VIK+ TGS LD LLGGGIET SITE FGEFR+GKTQL HTLCVT+QL E GA G+V+++DTEG FRP+RV IA R+GL+ E L+N+++ R + HEQQ+D + AA + + P +++VDS+ ALFRVD+SGRG+L+ RQQKLGRHLS+L ++A + NVAVV++NQ +DPGA AMF T KP+GG+++AHASTTR++ KKG+GE+R+ K++DSP + E E F I G+ + D
Sbjct: 16 LSEAKVDKIMQACRTMQSTGIFYTGREMMQLRQRVIKITTGSSDLDTLLGGGIETMSITEIFGEFRTGKTQLAHTLCVTAQLPSEMHGANGKVIFLDTEGTFRPQRVVEIAGRYGLNGDEVLDNILLARAYTHEQQMDVITAAAAKIVEDNSPYHLLVVDSITALFRVDYSGRGELAERQQKLGRHLSALKKLAEEFNVAVVIINQVTADPGAAAMFVKDTKKPIGGNIIAHASTTRLYFKKGKGEQRICKVYDSPDLAENEATFAIGPQGVMNAD 291
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: DLH1_CANAX (Meiotic recombination protein DLH1 n=7 Tax=Candida TaxID=1535326 RepID=DLH1_CANAX) HSP 1 Score: 300 bits (768), Expect = 2.020e-98 Identity = 157/274 (57.30%), Postives = 193/274 (70.44%), Query Frame = 1
Query: 7 VAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV---KPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITDTD 819
V KI+ AA K+ G F ++R KV + TGSKQ D +LGGGI++ SITE FGEFR GKTQLCHTLCV +QL + GG EGRV Y+DTEG FRP+R+ +IAER+G+D LEN+ R N E QI+ + L EG R++IVDS++A FRVD+SGRG+L+ RQQKL +HLS+L ++A D N+AV L NQ SDPGA A+FA KPVGGHVLAHAS TR+ L+KGRGEERVAKL DSP+MPE EC + I GGI DTD
Sbjct: 56 VEKIKEAAGKIKKYG----FLPATIVAESRTKVFHITTGSKQFDEILGGGIQSMSITEVFGEFRCGKTQLCHTLCVAAQLPTDMGGGEGRVAYIDTEGTFRPDRIRSIAERYGVDADICLENISYARALNSEHQIELVEQLGNE-LAEGTFRLLIVDSIMACFRVDYSGRGELNERQQKLNQHLSNLTRVAEDYNIAVFLTNQVQSDPGASALFAAADGRKPVGGHVLAHASATRILLRKGRGEERVAKLQDSPNMPEKECVYVIGEGGIKDTD 324
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: A0A1J4KIK7_9EUKA (Meiotic recombination protein DMC1 like protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KIK7_9EUKA) HSP 1 Score: 300 bits (769), Expect = 2.110e-98 Identity = 150/272 (55.15%), Postives = 199/272 (73.16%), Query Frame = 1
Query: 1 ATVAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATVKPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITDT 816
A V KI AA +DTS S F +G +C R++VI + TGS +LD LLGGGIE+ SITE FGEFR+GKTQLCHTLCVTSQL GG G+VVY+DTEG FRPER+ IA RFG+DP E L+N++ R F HEQQ+ A + E R++I+DS+ ALFRVDFSGRG+L+ RQQ LG+ +S+L ++AS+ NVA+ + NQ M+ P + KP+GGH+LAHASTTR++L+KG+G ERVAK++DSPS+PEAE +++++ GI D+
Sbjct: 67 AKVDKIIAAATSLDTSFS---FMSGNECLNRRQRVIHITTGSSELDKLLGGGIESMSITEVFGEFRTGKTQLCHTLCVTSQLPINQGGGAGKVVYIDTEGTFRPERIPTIAARFGVDPNEVLDNILYARAFTHEQQMQLILQATAQ-MAEDQYRLMIIDSITALFRVDFSGRGELAERQQTLGQMMSALSKVASEFNVAIFITNQVMASPDSALFVQAPKPIGGHILAHASTTRLYLRKGKGAERVAKIYDSPSLPEAEATYELSDTGIIDS 334
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Match: G8XZS9_PICSO (Piso0_005731 protein n=2 Tax=Pichia sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 / NRRL Y-12695) TaxID=559304 RepID=G8XZS9_PICSO) HSP 1 Score: 299 bits (766), Expect = 3.810e-98 Identity = 153/271 (56.46%), Postives = 194/271 (71.59%), Query Frame = 1
Query: 16 IQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGGGIETGSITEFFGEFRSGKTQLCHTLCVTSQLSKESGGAEGRVVYMDTEGNFRPERVEAIAERFGLDPTETLENVIVTRVFNHEQQIDRAHSIAALCLTEGPIRVIIVDSVIALFRVDFSGRGDLSVRQQKLGRHLSSLLQMASDLNVAVVLVNQCMSDPGAMAMFATV---KPVGGHVLAHASTTRVHLKKGRGEERVAKLFDSPSMPEAECPFKITNGGITDTD 819
++L A V + SG +Q + R + + TGS QLD +LGGGI + S+TE FGEFR GKTQLCHTLCVT+QL + GGAEG+V Y+DTEG FRP+R+ AIAERF +DP LEN+ R N E Q + + + L +G R++IVDS++ALFRVD+SGRG+L+ RQQKL +HLS+L+++A D NVAV L NQ SDPGA A+FA+ KPVGGH+LAHAS TR+ L+KGRGEERVAKL DSP MPE EC + I GGI D+D
Sbjct: 54 LKLRGAGVCSIAHSGFIPATIQA-ELRNRAYSISTGSNQLDDVLGGGIMSMSLTEVFGEFRCGKTQLCHTLCVTAQLPRSMGGAEGKVAYIDTEGTFRPDRIRAIAERFEVDPDACLENISYARALNSEHQTELSEQLGVQ-LADGSYRLLIVDSIMALFRVDYSGRGELNDRQQKLNQHLSALIRLAEDYNVAVFLTNQVQSDPGASALFASADGRKPVGGHILAHASATRILLRKGRGEERVAKLQDSPDMPERECVYVIGEGGIKDSD 322 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10295.485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10295.485.1 >prot_Ecto-sp8_S_contig10295.485.1 ID=prot_Ecto-sp8_S_contig10295.485.1|Name=mRNA_Ecto-sp8_S_contig10295.485.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=274bp ATVAKIQLAAAKVDTSGSSGMFKTGLQCRQAREKVIKVHTGSKQLDALLGback to top mRNA from alignment at Ecto-sp8_S_contig10295:1..5665+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10295.485.1 ID=mRNA_Ecto-sp8_S_contig10295.485.1|Name=mRNA_Ecto-sp8_S_contig10295.485.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5665bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10295:1..5665+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10295:1..5665+ >mRNA_Ecto-sp8_S_contig10295.485.1 ID=mRNA_Ecto-sp8_S_contig10295.485.1|Name=mRNA_Ecto-sp8_S_contig10295.485.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=822bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10295:1..5665+ (Ectocarpus species8 EcLAC_412)back to top |