Ec-00_007140.3 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_007140.3
Unique NameEc-00_007140.3
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length511
Homology
[Close]
BLAST of Ec-00_007140.3 vs. uniprot
Match: D7G3W1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W1_ECTSI)

HSP 1 Score: 780 bits (2015), Expect = 1.590e-269
Identity = 447/448 (99.78%), Postives = 447/448 (99.78%), Query Frame = 2 
Query:  569 MPSEGTDTGNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRDKQLGXXXXXXXXXNGVATGGDFELGEKSTESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDIKLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGDXXXXXAKAKEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXXLLYAGLGASRCFAVSAALPSLSLLLLVLPTAKRWISGTDARDGRPGAKGMPPGSSRRCWGXXXXXXXXXGRSSYELVAK 1912
            MPSEGTDTGNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRDKQLGXXXXXXXXXNGVATGGDFELGEKSTESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDIKLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGDXXXXXAKAKEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXXLLYAGLGASRCFAVSAALPSLSLLLLVLPTAKRWISGTDARDGRPGAKGMPPGSSRRCWGXXXXXXXX GRSSYELVAK
Sbjct:   68 MPSEGTDTGNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRDKQLGXXXXXXXXXNGVATGGDFELGEKSTESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDIKLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGDXXXXXAKAKEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXXLLYAGLGASRCFAVSAALPSLSLLLLVLPTAKRWISGTDARDGRPGAKGMPPGSSRRCWGXXXXXXXXDGRSSYELVAK 515
[Close]
BLAST of Ec-00_007140.3 vs. uniprot
Match: A0A6H5K6H4_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H4_9PHAE)

HSP 1 Score: 636 bits (1640), Expect = 8.340e-213
Identity = 351/392 (89.54%), Postives = 358/392 (91.33%), Query Frame = 2 
Query:  425 VVYTALFLYTVTRPSVLFAGTFLAVAAVEASCSFSTSPTGSLIDSSIRMPSEGTDTGNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRDKQLGXXXXXXXXXNG---VATGGDFELGEKSTESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDIKLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGDXXXXXAKAKEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAP 1591
            VVYTALFLY VTRPSVLFAGTFLAVAAVEASCSFSTSP GSLIDSSIR    G   GNLRLWGAIGFGIASLIGG+VCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRDKQLG XXXXXXXX     VATGGDFELGEK TESPVSPRT++RGCAVARDKT GEP+C GLIGTAAVTPAVATDTAATAD    HL DDDEPEGNDEAQTH+ALLSRPRTTSDKDGGGD NGSSG SRGD      KAKEQ GVLMAVRIM  TGESASFFMAVGLSGMG+GVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLR+PWWVLPAEVLHGLTFAAMWAATTEYAHGIAP
Sbjct:   72 VVYTALFLYVVTRPSVLFAGTFLAVAAVEASCSFSTSPIGSLIDSSIRQAFGGDGYGNLRLWGAIGFGIASLIGGFVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRDKQLGGXXXXXXXXXXXXXVATGGDFELGEKRTESPVSPRTATRGCAVARDKTAGEPKCAGLIGTAAVTPAVATDTAATADGNHDHLYDDDEPEGNDEAQTHSALLSRPRTTSDKDGGGDTNGSSGASRGDGEGPGRKAKEQGGVLMAVRIMTNTGESASFFMAVGLSGMGSGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLREPWWVLPAEVLHGLTFAAMWAATTEYAHGIAP 463
[Close]
BLAST of Ec-00_007140.3 vs. uniprot
Match: A0A6H5JEM5_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM5_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 9.770e-98
Identity = 214/390 (54.87%), Postives = 249/390 (63.85%), Query Frame = 2 
Query:  425 VVYTALFLYTVTRPSVLFAGTFLAVAAVEASCSFSTSPTGSLIDSSIRMPSEGTDTGNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRDKQLGXXXXXXXXXNGVATGGDFELGEKSTESPVSPRTSSRGC-AVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDIKLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGDXXXXXAKAKEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAP 1591
            VVY A  LY VTRPSVL A +FLAVAAVE S S S SP GSL+D++IR  S G   G+ RLWGA+GFG ASL+ GYVCD YGGS++GVM+VFV NV VA+ ASTGVPIG+        +    XXXX      G A+GG    GE    +         G   V ++  +        + T+  +           + + LH                A L   P  +  + GGG            XXXXX  A E+ GV+MA+RIM+ T ESASFF AV LSGMG GVIDTFLFIRLEELGGS VLCGLARLIMC+AEVPFFYLSGPLIRR G RGVIAL Q+AYLTRF+YYSVLR+PWWVLP+EVLHGLTFAAMWAATT+YAH IAP
Sbjct:   41 VVYVASILYAVTRPSVLLASSFLAVAAVEISVSVSESPVGSLVDAAIRHASGGDGFGSQRLWGAVGFGTASLVAGYVCDLYGGSFSGVMLVFVGNVLVALMASTGVPIGQ------VNNDXXXXXXXNDQNIEG-ASGGSNASGEVLESADRENNDKGIGWKGVHQEHKKVGSSLRLTVSTSNTSTXXXXXXXXXXNHLDLHXXXXXXXXXXQTTDGDALLEYHPGDS--RTGGGXKX---------XXXXXXGAGEKAGVVMAIRIMLSTDESASFFTAVVLSGMGRGVIDTFLFIRLEELGGSRVLCGLARLIMCMAEVPFFYLSGPLIRRAGARGVIALAQLAYLTRFVYYSVLREPWWVLPSEVLHGLTFAAMWAATTDYAHQIAP 412
[Close]
BLAST of Ec-00_007140.3 vs. uniprot
Match: A0A6H5JI17_9PHAE (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI17_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 1.790e-66
Identity = 154/380 (40.53%), Postives = 206/380 (54.21%), Query Frame = 2 
Query:  470 VLFAGTFLAVAAVEASCSFSTSPTGSLIDSSIRMPSEGTDTGNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAVAMAASTGVPIGRRGGGTATRDKQLGXXXXXXXXXNGVATGGDFELGEKSTESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDIKLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGDXXXXXAKAKEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTT 1609
            +L AG F A+AAVE SCS S+SP  SLID+++R        G  R WGA G+G+A+LI G+V D+ GGSY G+M+VFV  +A+A+ A+ GVP+GR                             +   G +  E P   R+ +     A  +TE       L+ T        T+T      + +++ DD E E + +   H                                     +E+  V   + IM    ++ SFF+ V LSGM  GVIDTFLFI L+ELGGSHVL GLA ++MC  EVPFFY+SG  IR++G R V+AL+Q+ Y+ R +YYSVL  PWWVLPAE+LHGLTFAAMWAATT+YAHGIAP   +T+
Sbjct:    1 MLTAGGFWALAAVEISCSVSSSPMNSLIDAAVRKAFGSGGYGTQRSWGAAGYGLATLISGFVYDAAGGSYDGLMVVFVTVLALALLAALGVPVGRT----------------------------NEPAGGQDDEEPRGDRSGTSDNWSAHGETE-------LVETGRAREDEVTNTRPC---VGMNV-DDLEDEESSKRPDHVE-----------------------------------QEEHRVASVLWIMFSAPQNFSFFLGVMLSGMAKGVIDTFLFIWLDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSVLWDPWWVLPAELLHGLTFAAMWAATTDYAHGIAPGRDQTS 306
[Close]
BLAST of Ec-00_007140.3 vs. uniprot
Match: D7G4M5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M5_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 3.610e-48
Identity = 89/141 (63.12%), Postives = 110/141 (78.01%), Query Frame = 2 
Query: 1187 KEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTT 1609
            +E+  V   + IM  T ++ SFF+ V LSGM  GVIDTFLFI L+ELGGSHVL GLA ++MC  EVPFFY+SG  IR++G R V+AL+Q+ Y+ R +YYSVL  PWWVLPAE+LHGLTFAAMWAATT+YAHGIAP   +T+
Sbjct:  225 QEEHRVASVLWIMFSTPQNFSFFLGVMLSGMAKGVIDTFLFIWLDELGGSHVLLGLAGVVMCCGEVPFFYVSGSFIRKIGPRNVVALSQIGYIVRLVYYSVLWDPWWVLPAELLHGLTFAAMWAATTDYAHGIAPGRDQTS 365
[Close]
BLAST of Ec-00_007140.3 vs. uniprot
Match: D7G0X9_ECTSI (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X9_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 1.020e-38
Identity = 79/147 (53.74%), Postives = 94/147 (63.95%), Query Frame = 2 
Query: 1367 MCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYS----------------VLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXXLLYAGLGASRCFAVSAALPSLSLLLLVL 1759
            M  +EVPFFY+SGPLIR +G R V+AL+Q+ Y+ R IYYS                VL  PWWVLPAE+ HGLTFAAMW+ATT+YAHGIAPAHLRTT+Q  V                 + YA LG  RCF  +AALP+LSLL LV+
Sbjct:    1 MSFSEVPFFYVSGPLIRTIGPRNVVALSQIGYIVRLIYYSKTSSVTNPLTGLRHLQVLSDPWWVLPAELFHGLTFAAMWSATTDYAHGIAPAHLRTTMQASVGGLKRGLGYGLGAIVGGVSYANLGPRRCFLATAALPALSLLFLVI 147
[Close]
BLAST of Ec-00_007140.3 vs. uniprot
Match: A9VAW9_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VAW9_MONBE)

HSP 1 Score: 156 bits (395), Expect = 6.130e-37
Identity = 78/198 (39.39%), Postives = 113/198 (57.07%), Query Frame = 2 
Query: 1184 AKEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXXLLYAGLGASRCFAVSAALPSLSLLLLVLPTAKRW 1777
            A +Q  ++  + +M     +  FF+ + LSG GAG+ID +LFI +EELGG+  + G+AR +MC AEVP F+ SG +  R+G  G + +T  A++ RF+ Y+ +  PW V+ +E LHGLTFA MW A T  A  IAP  L TT+QG+VS                 +Y   GA   F ++    S SL+LL++    RW
Sbjct:  240 APQQAALIEILHVMTKDAYTTIFFLTIALSGFGAGIIDNYLFIYIEELGGTKTIQGMARFVMCAAEVPMFWYSGAIFDRLGTTGCLVVTFCAFIVRFLIYAFMSNPWLVVASEPLHGLTFAVMWTAATRQAFAIAPQGLGTTMQGIVSGLHFGLGSGMGALVGGFVYESKGAFSTFMLAVGTASSSLVLLLIAEWTRW 437
[Close]
BLAST of Ec-00_007140.3 vs. uniprot
Match: D7G0X7_ECTSI (MFS_1_like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X7_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 8.210e-33
Identity = 56/75 (74.67%), Postives = 68/75 (90.67%), Query Frame = 2 
Query: 1367 MCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAP 1591
            MC++EVPFFY+SGPLIR++G R V+AL+Q+ Y+ R +YYSVL  PWWVLPAE+LHGLTFAAMWAATT+YAHGIAP
Sbjct:    1 MCLSEVPFFYVSGPLIRKIGPRNVVALSQIGYIVRLVYYSVLSDPWWVLPAELLHGLTFAAMWAATTDYAHGIAP 75
[Close]
BLAST of Ec-00_007140.3 vs. uniprot
Match: F2U1L1_SALR5 (MFS domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U1L1_SALR5)

HSP 1 Score: 144 bits (362), Expect = 2.500e-31
Identity = 74/191 (38.74%), Postives = 111/191 (58.12%), Query Frame = 2 
Query: 1211 AVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXXLLYAGLGASRCFAVSAALPSLSLLLLVLPTA--KRW 1777
            A+R+++    +  FF  + ++G G GVI+TFLFI +++LGGS  + G  R + C++EVP F+ SG ++ ++GV G + LT V Y+ RF  YS++R PW V+ +E LHG+TFA MWA +T+YA  IAP  L  T+QG++                  +Y   GA   F VSA +   + + LV   A  K W
Sbjct:  501 ALRVIVQDANTMMFFFIIVVAGFGVGVIETFLFIFIQQLGGSETVQGFGRFVTCMSEVPLFWFSGYIMNKLGVNGCLMLTFVCYVLRFTIYSLMRSPWLVVASEPLHGVTFAIMWATSTKYAADIAPPGLGATMQGILGGLHFGLGQGLGALIGGAIYDVHGARFTFRVSAGMAGAAFVFLVASEAVKKCW 691
[Close]
BLAST of Ec-00_007140.3 vs. uniprot
Match: A0A7S0ZL95_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZL95_9RHOD)

HSP 1 Score: 138 bits (348), Expect = 5.170e-31
Identity = 66/154 (42.86%), Postives = 97/154 (62.99%), Query Frame = 2 
Query: 1250 FFMAVGLSGMGAGVIDTFLFIRLEELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLTRFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQGVVSXXXXXXXXXXXXXXXXLLYAGLGASRCF 1711
            FF+ + +SG+G G+I+TFLF+RL ELG +  + G++RL+MC+ E+PFF+ +  L+ R GV GV+ + Q AY  RF +YSVL+ PW V+  EVLHG+T+ A+W  ++ +AH IAPA L  T Q +V                 +LY  +GA   F
Sbjct:  262 FFLILLISGLGNGMIETFLFVRLNELGATSRVLGISRLLMCLGELPFFHYNEQLVSRFGVFGVLGIVQCAYCVRFFWYSVLQNPWNVVYVEVLHGITYGALWGTSSVFAHQIAPAGLEATAQSLVGLIHWGIGFTLGSTLGGVLYEHVGAVNTF 415
The following BLAST results are available for this feature:
BLAST of Ec-00_007140.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3W1_ECTSI1.590e-26999.78MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K6H4_9PHAE8.340e-21389.54MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JEM5_9PHAE9.770e-9854.87MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JI17_9PHAE1.790e-6640.53MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
D7G4M5_ECTSI3.610e-4863.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0X9_ECTSI1.020e-3853.74MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
A9VAW9_MONBE6.130e-3739.39Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
D7G0X7_ECTSI8.210e-3374.67MFS_1_like domain-containing protein n=1 Tax=Ectoc... [more]
F2U1L1_SALR52.500e-3138.74MFS domain-containing protein n=1 Tax=Salpingoeca ... [more]
A0A7S0ZL95_9RHOD5.170e-3142.86Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:11224527..11236471 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score784.3
Seed ortholog evalue3.5e-224
Seed eggNOG ortholog2880.D7G3W1
Length3844
KEGG koko:K11367
Hectar predicted targeting categoryother localisation
Gene idEc-00_007140.3
EggNOG free text desc.MFS_1 like family
EggNOG OGsKOG3762@1,KOG3762@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03021,ko03036
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_007140Ec-00_007140Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 11224527..11236471 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007140.3Ec-00_007140.3Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 11228812..11234156 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007140.3.13Ec-00_007140.3.13Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11224527..11226049 -
Ec-00_007140.3.12Ec-00_007140.3.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11226607..11226716 -
Ec-00_007140.3.11Ec-00_007140.3.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11227487..11227549 -
Ec-00_007140.3.10Ec-00_007140.3.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11228769..11229000 -
Ec-00_007140.3.9Ec-00_007140.3.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11229421..11229740 -
Ec-00_007140.3.8Ec-00_007140.3.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11230243..11230348 -
Ec-00_007140.3.7Ec-00_007140.3.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11231274..11231445 -
Ec-00_007140.3.6Ec-00_007140.3.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11232137..11232673 -
Ec-00_007140.3.5Ec-00_007140.3.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11233328..11233517 -
Ec-00_007140.3.4Ec-00_007140.3.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11234138..11234301 -
Ec-00_007140.3.3Ec-00_007140.3.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11234955..11235055 -
Ec-00_007140.3.2Ec-00_007140.3.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11235547..11235695 -
Ec-00_007140.3.1Ec-00_007140.3.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 11236295..11236471 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0071403UTR:Ec-00_007140.3Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 11224527..11226049 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_007140.3CDS:Ec-00_007140.3Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 11228812..11229000 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0071405UTR:Ec-00_007140.3Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 11234157..11234301 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_007140.3 ID=Ec-00_007140.3|Name=Ec-00_007140.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=511bp
MPSEGTDTGNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAV
AMAASTGVPIGRRGGGTATRDKQLGGGGGGGGGGNGVATGGDFELGEKST
ESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDI
KLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGDGE
GPGAKAKEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRL
EELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLT
RFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQG
VVSGIHWGLGFGLGAMLGGLLYAGLGASRCFAVSAALPSLSLLLLVLPTA
KRWISGTDARDGRPGAKGMPPGSSRRCWGGCCGGGGDDGRSSYELVAKEA
QANSPNDRNGYCCDDDVDADGGGNSIDKTDNSSNNGSDSGEDVSSDDSDL
EAQRREATAV*
back to top

spliced messenger RNA

>Ec-00_007140.3 ID=Ec-00_007140.3|Name=Ec-00_007140.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3844bp|location=Sequence derived from alignment at chr_00:11224527..11236471- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GAGGTCCGGGACGGTTCTCGGCGCATCTCCGGATCGGATGCGCGTGCGGC
GCAACACGAACAGGAACGTTCTGGAGAACAGAACCTCTGTGACGTTGACA
TCATCTCTGGACGACCAGCAACCAGCCCCCCCCCTCCGGCGAGGAGGGGC
GAAGTGCACGGCGCGACAGCGAAGAAGGAAACTCGAGACTCGCATACAAT
AACCAGGACAAGCCATGGCGCAAAGAGCAGCCGTGATAGCATGCGTGCTT
TATTTCTTCCTTTTCATGGCACACGGCTGTGTCGCGCCGTTCATGCCCCT
CATCTGGCGATCCAAGGGGCTCTCCGAACACCAGGTCGGTATATTGGGGG
CGATTCGACCCGTGGCCTCCTTCTTCGTAACCCCGGTCATGTGCGCGTTC
GCGGACAGGCATAGCATTCACCAGCAGGTGGTCTATACGGCGTTGTTTTT
GTACACCGTCACTCGACCGTCGGTGCTTTTCGCGGGAACGTTCTTGGCGG
TGGCAGCGGTGGAGGCGTCTTGCTCCTTCTCGACCAGTCCCACCGGCAGC
CTCATCGACTCGTCCATTAGGCATGCCTTCGGAGGGGACGGATACCGGCA
ATCTTCGGCTGTGGGGTGCGATTGGTTTCGGGATCGCCTCGCTCATCGGG
GGCTACGTGTGCGACTCCTACGGCGGCAGCTACACCGGGGTCATGATCGT
GTTCGTCGCGAATGTCGCGGTGGCGATGGCGGCGTCGACCGGCGTTCCCA
TCGGGCGACGAGGGGGCGGAACCGCCACCCGAGACAAGCAGCTTGGCGGC
GGCGGCGGCGGCGGCGGCGGCGGTAACGGCGTCGCTACGGGAGGAGACTT
CGAGCTCGGCGAAAAGAGCACGGAGAGTCCCGTGTCTCCTCGGACCTCAT
CCCGAGGCTGCGCTGTTGCTCGTGACAAGACGGAGGGAGAACCGGAGTGC
GGCGGTCTCATCGGAACTGCCGCCGTGACCCCAGCAGTGGCCACCGATAC
CGCCGCCACCGCTGATGATATTAAGCTCCATCTCCGCGACGACGACGAGC
CCGAAGGCAACGACGAAGCCCAAACGCACGCCGCCTTGCTGTCCCGCCCT
AGGACGACCTCGGACAAGGACGGGGGCGGCGACAACAACGGCAGCAGCGG
CCCCAGCAGAGGTGATGGTGAGGGACCCGGGGCGAAGGCGAAAGAGCAGG
AGGGTGTGCTCATGGCCGTCCGGATCATGATGTACACGGGAGAGAGCGCT
TCCTTTTTCATGGCAGTGGGGCTCAGCGGCATGGGAGCGGGCGTGATCGA
CACGTTTCTCTTCATTAGGCTGGAAGAGCTCGGGGGTTCGCACGTGCTGT
GCGGGCTCGCGCGTCTCATCATGTGCATCGCGGAAGTGCCGTTCTTCTAC
CTCTCGGGGCCTCTCATCAGGCGGGTCGGCGTACGGGGAGTGATCGCCCT
CACCCAGGTGGCCTACCTGACTCGCTTCATCTACTATTCGGTGCTACGAA
AGCCGTGGTGGGTCCTCCCGGCCGAGGTGCTGCACGGCCTGACCTTCGCC
GCAATGTGGGCAGCCACCACCGAATACGCGCACGGGATCGCTCCAGCTCA
CTTGCGGACGACGATTCAAGGAGTCGTGTCCGGGATCCACTGGGGCCTGG
GCTTCGGGCTCGGGGCGATGCTGGGAGGGCTCCTGTACGCAGGCCTCGGT
GCTTCTAGGTGCTTCGCCGTCAGCGCCGCTTTGCCTTCGCTGTCCCTGCT
GTTGCTGGTCCTTCCCACGGCGAAACGGTGGATCAGCGGCACCGACGCGC
GCGACGGGCGACCGGGGGCAAAAGGTATGCCACCTGGTAGCAGCCGACGG
TGCTGGGGCGGCTGCTGCGGCGGTGGTGGCGATGATGGGCGCTCTTCGTA
CGAGCTCGTTGCGAAGGAGGCTCAAGCCAACAGTCCCAACGATCGAAACG
GCTACTGCTGTGACGACGACGTCGATGCCGACGGAGGTGGGAACAGCATC
GACAAGACCGACAACAGCAGCAACAACGGCAGCGACAGCGGCGAAGACGT
CAGCAGCGACGACAGCGACCTAGAGGCACAGCGGCGGGAGGCAACGGCCG
TGTAGACGAAACCCGCTCTGTTCTTCTGTCCCGTTACATCACAACACGTA
AGTTCAAGCCCCCTTCGTTCTCCGCCCGGGGGATAGGAAATCCGCACCAT
CAAATCGTTCACTTTGTACGCAGCGTGACTGGTTGTTGCATGGCTGGGTT
CCAGCATTCCACAACCAAATAATTTCGACTGCTGTTCAAGGAATGGTATA
CACACCCATCCACACTCTAAGTACCACCGACCACAGACGCAGCAGACGCG
TGACTTGTGCGGTTGCCGAACACGATGCCCGCGGGAGTCGCAGCAGATCG
CGCTACAGCCAGGCGCAGAGCATCGCGCATCAGGGTACTTGGACACCTTC
ACACCCATCCTGAAAGGGGTGTACTCTGCACGTCGGCACCACCGGTACGG
CAGCTTGGCTTCTGAGAAAGTCAGCACGAGCGAAACGCCAGGAAACCAGC
GAGAAGAGAACATCGACAGGTAGGTTACATAGCTGGCGTCATAATACGGA
CAGGCTTGTGGGTGTGGCACGGGGTCACAAACTAGGGGAGGTGTGCATTG
CCGCGACATATCTGGGTTGGGACAATGTGTTCCAGTGAAATTCGACACAT
CACAATGTTGTGGGAATGGACGCATCTCCTTTCTTAGTCAATGTCCGGTA
TTATTAGCAGCATCCCCATTCTGCGTGTTATGCTGAGACTACCGTGGTCG
GAGTCGATTGACGCCTTGGAAACACGCGACCAGATCTTCCGTTCATCGGA
TCCACTCCGTGCATATTGCATAGAAGAAATGTCCCACACCTTGAATGTGT
GTGTAGAAAGCTGTACAAGCCTTGTAAGACCGAGTATGTCTCGAAATCAT
AGGCTGGAAAAGGCTGCACCCCCGCCGGGAACATCGACTGGGTCTAGTGT
CTAGTGCTAGGACGTTTCGCCCAGTCTACGGAGGGCCCTCGAGAAGCTGT
TTTGGATACTCCACAATGGGTCAGACGCTTTGGTGCGCTCATCATATGCC
TGTTTAAACATCATCAGAGCCGTTGCACGGCTCGACGCCCACAGATCAGT
GGTCGCCCGAAGTCGACATGCTGGTCTGGATAGGCACGCCGTTCAGGGAG
GACCGGGTGTTGCGGCACGTTCTACTAGGGGCGAAGAGGTGCATGGGTAT
GTCATGGAAGCCAATAGGACGGTAGCAGACCCACACGAGGTCCACCGAGT
GGCTACGGAGGGGCCGTAGAGCGGGGAGGGTCGGGAGAGGAGGCAAGCAG
AGTTTCTGTGTCGATTGGTTTTAGTTGTTGTTCTCTGTTGGTCCTACAGG
CAACTTCGGCATTTCGTAGGCGTCTGGAGATGAGTTTGAGAACAAGGCGG
GGGTACCTTGTTAGATGTGCGCAGGGTTTGTCGCATTGATTCGATTTGTG
AAGAAGGGCTTCTCACGCCTCCAGGGTTTTGAGGCGCCTGAATCATTCGA
CGGCAACCCAACAATGAGCAAGTTCCCTAGCAATGCTAGGTCTTCTGTTG
TCCCTTCTTCTGGCATCGTCTGTGGTCACGGAAGCTTGTCTCCAAGCTTG
AAGACAAGCATGTGTCCATTTGTGAGCAGAAAGATCGGTCTTTCTCTTTC
TCTGGTTTTTCTTCTCTCGCCCAGCAAGAACAGATCAAACTCGCTTGGAA
TGCAGAGAGAGAGCCCCAACCTCACTGCGCACGTTTATTATTCTTGATCG
CTCTTGATCGCTCTCAAGTTGGGTGTACCAAGCGGTGGGTCGCC
back to top

protein sequence of Ec-00_007140.3

>Ec-00_007140.3 ID=Ec-00_007140.3|Name=Ec-00_007140.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=511bp
MPSEGTDTGNLRLWGAIGFGIASLIGGYVCDSYGGSYTGVMIVFVANVAV
AMAASTGVPIGRRGGGTATRDKQLGGGGGGGGGGNGVATGGDFELGEKST
ESPVSPRTSSRGCAVARDKTEGEPECGGLIGTAAVTPAVATDTAATADDI
KLHLRDDDEPEGNDEAQTHAALLSRPRTTSDKDGGGDNNGSSGPSRGDGE
GPGAKAKEQEGVLMAVRIMMYTGESASFFMAVGLSGMGAGVIDTFLFIRL
EELGGSHVLCGLARLIMCIAEVPFFYLSGPLIRRVGVRGVIALTQVAYLT
RFIYYSVLRKPWWVLPAEVLHGLTFAAMWAATTEYAHGIAPAHLRTTIQG
VVSGIHWGLGFGLGAMLGGLLYAGLGASRCFAVSAALPSLSLLLLVLPTA
KRWISGTDARDGRPGAKGMPPGSSRRCWGGCCGGGGDDGRSSYELVAKEA
QANSPNDRNGYCCDDDVDADGGGNSIDKTDNSSNNGSDSGEDVSSDDSDL
EAQRREATAV*
back to top

mRNA from alignment at chr_00:11224527..11236471-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_007140.3 ID=Ec-00_007140.3|Name=Ec-00_007140.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=11945bp|location=Sequence derived from alignment at chr_00:11224527..11236471- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GAGGTCCGGGACGGTTCTCGGCGCATCTCCGGATCGGATGCGCGTGCGGC
GCAACACGAACAGGAACGTTCTGGAGAACAGAACCTCTGTGACGTTGACA
TCATCTCTGGACGACCAGCAACCAGCCCCCCCCCTCCGGCGAGGAGGGGC
GAAGTGCACGGCGCGACAGCGAAGAAGGTGAAGAAATGCGTTTCAGTGGT
AAATTCCCGGCCATTGTCGTCGCCGTGATCTGTGGTGTTGAGCGGGTGTG
TGCGTATGCATATATGTGTACGCCAACTTCAATGATGGTGACTGCTATAC
CTTGTGTCCTTGTGTACAGTCAGCACCGAGGATCTCATCTGCTGTGCAGG
TACCAAGCTGCAGCTGCTGCGGGCTTGAAGGTTACTTCCTGTCGGTGCAC
GGTCGTGCGTATTCGTAACGGAGCATCAAATCCTATCTGGTGTTATGTCA
GTCACCGACGCAGAACGGGTAGCCGATGCTGAGATCTGCGCAACGATGCC
TGTAGAAGGCACTCGGCGAAGCTCCGTTTCCTGTCGAGATGATGAGCCCC
GCTGATTGTAGACATGTGCGCAGATACGTGATCATGCCTTACCACCCTCG
CACCTGGATGAATGTACTTCAAAAATTGTCCAGTTTTCCCCTTGTTCTTT
GTTCCCCTATCTAATGAATCCATTGCTGTTCAGTACTATGTACTGCTATT
TTGTTGGTGCCATGGTCGTACACCCAATCTTCGCGACCTTTGGTGATGCT
CCAACCAGCGCGTTTCGTCGTGTCAGGAAACTCGAGACTCGCATACAATA
ACCAGGACAAGCCATGGCGCAAAGAGCAGCCGTGATAGCATGCGTGCTTT
ATTTCTTCCTTTTCATGGCACACGGCTGTGTCGCGCCGTTCATGCCCCTC
ATCTGGCGATCCAAGGGGCTCTCCGGTGAGAGGATGCTGCTGTGTACAAA
ATTTACTGCTTGCTTAATATTTACCGACCATCAAATCTTATTATTTAGTT
GGTTGCGACAGGGTGCTGTACACTGCTGTCGAGCATTTATAGGTGCCGTA
TGTAGACTGGTCTCGAGCATCAGGACGTACGGAAACTGCACGCAAGGAGC
GGGGATACAGCTGCCATTCTCGAATGTACCTGGCGGACTCAAGGAAAGAA
TAAATCGAAACCTGGTTTTCGAGAGCGGCGCTCATCGACAAGTTCCGAGG
TTCAAGCCTCTGGTAAAGCTGCCGATCAGCTTACAAACTCAGTGATATGC
ACACCTCCCGAAGTTCATACCGACGTCACCCCATGGGAAGGCTAGTGAAC
TTCAACGAAACGTTAGAAGTAGAGTGACACCCTGAAATACCTCTCCTTTT
GCTCTGCTTACCTAATGTTGCTGCCGTTTTGCCTTGCTGCTGTTCGCTGC
CCGCCGAGAAAACCAGAACACCAGGTCGGTATATTGGGGGCGATTCGACC
CGTGGCCTCCTTCTTCGTAACCCCGGTCATGTGCGCGTTCGCGGACAGGC
ATAGCATTCACCAGCAGGTGCGTGCGTGCTGTGTCAAACCATGGCAGCAC
TAGGCCTGCCATATGCGTTTCTAGTGACGCACCCACACGCGTGCATTCGC
CCGGGACGACTTGGAAGCAGTCTACGGATCGTGGGGGGTTGGTTACCTAA
AGCGCTGCCGAGGGACTCGTTTGAGGACGAACAAGGCCAAGTCTCTTGAT
CATGTGCATGGCCAGAGGTCGCCCCGGCTCGTGTATACCATACCAAGTAT
CTTGCCAGCCAGCCCCGAGTTTGATGACGTTGCGCAGAAGGCGTGTGCGT
TTCAAACGGTTCATGTCCGGGTAGGCTCGCCCGATGTGCGCGGAACGTGC
CTCTTGTATTTTGTTGGCGGTCTACAGTCTCTTGGCGAGGACTGCTGACA
TGTGTGGTTGTTGAGCCGCCGCCCCCATCGCCTACAATTGTACCGCTCTA
CGTCGCACTGCTCGTGCATGTGTATCAGGATGGTATCTTGACGTATCTTC
GATTGTTTGCATCCCTCCTGTTCCATGGAGGGTCGAAAACTCGTGTCAGC
CGAGCGGTAGCCGCATCTCTGTGCGAGGCCATGGTGGGCTCTCCGAAAAA
CACCCATGAACGAGCCAGCAACTGTCCGCCCTCCGACCCCTCCCCACGGC
CCATCAATGCGAAAACCAAGGTGGTCTATACGGCGTTGTTTTTGTACACC
GTCACTCGACCGTCGGTGCTTTTCGCGGGAACGTTCTTGGCGGTGGCAGC
GGTGGAGGCGTCTTGCTCCTTCTCGACCAGTCCCACCGGCAGCCTCATCG
ACTCGTCCATTAGGCATGCCTTCGGAGGGGACGGGTGAGAGAAAAAACAT
CTATCAACCGGGAGCTTTCTGTATATCTGCCTTTGGGTCAGGGAGCTATG
GGAGTTGCTCCGTACGCCAATGCGTTGGCAGCAACTCAGTCGTACAACCA
TTCGCGAAACACCTTGAGGTCGTCGGCCTGCCGTATCGTGTCGGAGCCGG
AGAAAGCGACCACCACCAGCGGGAAACGTGATTGCAGTTGCGGTGTCGTG
TTTCGATACCCCGCGGCGGTACCCGAATTCAGAGTCTTTCACTCACTACT
TACTTCTGTCGAAGGAATAATATACTATTTTGCGTTTTTTACAGAGGTCG
CGTTCTAAAAATTTAAAACCGTAGCACCCTCTCTCAAGGGTAGTGCCAAC
AGACCTTGGATGACTAGGCTATCCGAAACAAAAGTAGGTGGCTATTCGAC
GTGACTGGGATAAGTCATGGCGTCTACGCCAAACGTTTGGGACCGGGCTG
GCTATCTTATAAAGCTTTAATAACCCACCTTTTTGATATCCTGACCGCGT
GCTTTGCCTCCGAACATGCGTGGTTCTGTTGTTTCATGGCTGCGCAACAT
ATCTAGAGTAACGCCGCCGCCCCCCCCCCCCGACACCTCTCCTTACCAAA
GCAGATACCGGCAATCTTCGGCTGTGGGGTGCGATTGGTTTCGGGATCGC
CTCGCTCATCGGGGGCTACGTGTGCGACTCCTACGGCGGCAGCTACACCG
GGGTCATGATCGTGTTCGTCGCGAATGTCGCGGTGGCGATGGCGGCGTCG
ACCGGCGTTCCCATCGGGCGACGAGGGGGCGGAACCGCCACCCGGTGAGA
ACCGTGAGCAGGGCGAGTTTCATGCTGCGTTTTGTGGATGGTGTGCTTGG
TGCTTATGGGCCGGTCCCTTGTGAGGTGCGTCAGGATAAGTTGCGTTTCC
TGTCGGGAACAGTGTTGAATTGCCAAGCGCTGCGTTGAGTGGCAAAGTGT
GCATCGAGACGATCGAGTGGCACGCGCTGCTGCTGTTGACAAGAGGTGTG
GCTAAGGAGAGGGAGGCACCCCGGTACAGCAGCAGAGCCGTCGAATGGTG
TTACATCTTTGTAGATCTGCACGCTATGCAGTGCCCAACGGCCGACCGAA
CCCACGGTGGCGTGAAGCGCTCAAGACCACTGTCACGAGCGTCGAGTCAG
GGCACAAGGAGACATCCGCGCGTGCGCATTTTGACCCTCCTACGGGTGCC
CACAAAGGAGCGCGTGTCTCTTCGCCCCCGCCTGAAGCGTTGAAATTGCC
CGTGCCTTTCGATATCTCACGGCTCTGCGACCTTGCGCGCGCATCCCACT
ACAACCTACAACGTCTGCGCAATGTGGCCTGACGGGTTGATAACTTCGCC
GGGACAGTTTGTTTTGCCTTCACCGATGAATCAATGATGATGATGATGAT
GATGATGTCCGTGCATCTGGTTTCCGTGTCCTCCTGAACCAAACCCAGAG
ACAAGCAGCTTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTAACGGCGTC
GCTACGGGAGGAGACTTCGAGCTCGGCGAAAAGAGCACGGAGAGTCCCGT
GTCTCCTCGGACCTCATCCCGAGGCTGCGCTGTTGCTCGTGACAAGACGG
AGGGAGAACCGGAGTGCGGCGGTCTCATCGGAACTGCCGCCGTGACCCCA
GCAGTGGCCACCGATACCGCCGCCACCGCTGATGATATTAAGCTCCATCT
CCGCGACGACGACGAGCCCGAAGGCAACGACGAAGCCCAAACGCACGCCG
CCTTGCTGTCCCGCCCTAGGACGACCTCGGACAAGGACGGGGGCGGCGAC
AACAACGGCAGCAGCGGCCCCAGCAGAGGTGATGGTGAGGGACCCGGGGC
GAAGGCGAAAGAGCAGGAGGGTGTGCTCATGGCCGTCCGGATCATGATGT
ACACGGGAGAGAGCGCTTCCTTTTTCATGGCAGTGGGGCTCAGCGGCATG
GGAGCGGGCGTGATCGACACGTTTCTCTTCATTAGGTGATGGCGGAGAAA
TTACCGACGTTTTGGAGCAATCGTTTGCTCTTGTTCGTGGGGATCGTGCG
GTTGTTGACTGAAAAATCCTCTTGTTGGTGGTTGGTTGGTCGGAGTCTCA
ATAGCACTGCAGTACAAATAGCATGGTTTTGCGTGGTGATGCTCTGATGC
TTGGGTGGTTTGTTTTTAGTCGACCATGTTGTGCTCTCGCCGATTCAGTG
ACAAAGCGTCGCCGACGTCGATGCATGAACAGAGTTTATTCTGGTTTTTT
GTATGAGAGGCGAAACTGAAACCGAAGCTAAACACTCATCATGCCGGCCG
TTCTGAGGTGGCGAACCACACGCGCAAGAGCAGCCCTCCTGTACGCATGC
TCTGTGTTCGCGTTGGTGTTTAAGGCGAAGCCTGCATGAACCTCGGCTTG
CCCATTTTCCTCCATGCCGCACATTGCGCCGCCCTTATCCCTCCACCGGT
AGACACTCGAGGCCCCTAAATATGACTGCATTCTGGACTGGAGTTGACCT
TTGATGTAAACCTTGACCCTGCTATAGCCCATACGCTGCCACCCTCCTTC
TACTCTGTGCTTCAACTCCCACACGGATGTTAACCCTGACCCTGCTATAA
CCCCTACGCTGCTGCCCTCCTTGTACTCTTGTGCTTCAACTCCCACACAA
CCCCCCAACCCCATCTCCCAACCAAGGCTGGAAGAGCTCGGGGGTTCGCA
CGTGCTGTGCGGGCTCGCGCGTCTCATCATGTGCATCGCGGAAGTGCCGT
TCTTCTACCTCTCGGGGCCTCTCATCAGGCGGGTCGGCGTACGGGGAGTG
ATCGCCCTCACCCAGGTGGCCTACCTGACTCGCTTCATCTACTATTCGGT
GAGCCTTGTCTTTTGTCTTCCCCCGCTTACCGTAGGCTCGAGAGAGCTGG
CGCACTCGCTATCCGCCTGGATGGAAGTTTGTCGCCTCCGCAGGCAGTGG
TGGGGGGCCCTCCCTTCCCCTTCCCTCCAATTGTTTAGCTTTCGCTCCTT
CAGAGCAGTGGCCACGTTTGTAGAGGTAGAGGGGTAGGGTGCCTGGTGTT
GTTGCGAAGTGAGTTCAGCCGGCGTTCGCGAGGTCGCTGTGAGGCAGAAA
ATCGGGTGTCCTGAAACATTTTTTTCCCTCGTACGGCCACCACCGCACAG
GAAGACTCTTTCAGTGGTTCAAAGGTGTACAGGTTGCCCAAGCACTGAAG
ACAAAAGGAAAATCATTTTGTTTCTTCTTGCCCTAGGGACACAGCAGGTC
AATGGTGGATTGGACACCAGGTCGTTCGCCATGGGCCATCCTGGGCGACG
GAGGCAAAGAAAGAATATCGAGCCTTGGCTCGTACTCGACGCTTTACAAA
TTTCGTCGGCCAACTGCAGCGACATATCCTTCTTTGTCTCTCCGTTTGTC
TCGTCTGCTTCCTCCTACCTCGGGAACCAGGATCCCCTCACCCTATCTCT
TTTTCCGCGTTCACAGGATTGCACAGCAATGTCTTTCCGTCCAACGAGGG
CGGTGACGACCATAGCAGCGCACTGAACCACTCTTACCTATCTGAACCCG
TGCTAAAGTAGTGCCGAACGCGCCCATCGCATACATGCCTTCACTTGAAT
CACATTCTGGCCGCCCGGTCCATTGGGGGACATGAGACCGACTCTGCCGG
CTATTCCTGCCATGGCGGAAGGCTGTTAGTCTCTACCTCTGTTCTGAGTT
GCATGGAATTGAAGTGTCTCGTTGCCCCTGTGCTGTCCTCTTCGGGACGA
ACTCGACCCTCGAACTGGCTCAGGTGCTACGAAAGCCGTGGTGGGTCCTC
CCGGCCGAGGTGCTGCACGGCCTGACCTTCGCCGCAATGTGGGCAGCCAC
CACCGAATACGCGCACGGGATCGCTCCAGGCACGTTGTGCTGCTGCCGCT
GCCAACTACAAATGCTAGTGTTCTTGTTTCTTTGTGCTCTCTCGTCCTGC
CCATGCACGCTTTTGTATTTCGTCAATCGTTGCAAGATACCACGGCTGAC
TCCTACACTGCACTGCGAGTTTTGGCACGGCGTTGTAGCTTTGGATTCGG
GCTGGGTGTGGTCGTGCCGATGCCGCATGTTTAGGCAACAAACGAAACAC
AACGGGTGTTGTTCTTGGACAGTCCTCATACCGAACTCGCCCATTCCCCA
TACAGAATACATGTAACCTCTCGGAAACTTTCCTCCCTCTCGTGGACGTG
GCCGGCGCGATCACACGCAAAACACTGCCTCGCGCCCACGCGCGCGCCCA
CATACGCCCACCACACACACCATACGCCATGCGTAGGCATGCGAACGGTT
CGCCCTGACCCGAGGGCTGCCTCCCATCTAACCGTCCCTCGGTCCTTCCA
CGGACCTCACAAACACAAAATCCAACCACAGCTCACTTGCGGACGACGAT
TCAAGGAGTCGTGTCCGGGATCCACTGGGGCCTGGGCTTCGGGCTCGGGG
CGATGCTGGGAGGGCTCCTGTACGCAGGCCTCGGTGCTTCTAGGTGCTTC
GCCGTCAGCGCCGCTTTGCCTTCGCTGTCCCTGCTGTTGCTGGTCCTTCC
CACGGCGAAACGGTGGATCAGCGGCACCGACGCGCGCGACGGGCGACCGG
GGGCAAAAGGTATGCCACCTGGTAGCAGCCGACGGTGCTGGGGCGGCTGC
TGCGGCGGTGGTGGCGATGATGGGCGCTCTTCGTACGAGCTCGTTGCGAA
GGTCGGTGAATGAACACGATGGTGTATCGCTTGTACTCCACAGGGCAAAT
TTCAGGCAATCCGGGCCTTTTTGTTCTGTAGGATCGGGTCTGGGGGGTAA
ACGGGGCGGCTGGCGACGCAATTGTTAAAGGGGGCGTGTAGTGCGCTCGG
CGGAAGGGCTGGGATGGCCGCAGCGCAAGATGTTCTTCGTTCAAGTTTTG
TGGGTCGGCGATGAGAAAGAAACAAATCGCGGCGGCATGCGTGGCAAATA
CTTCGAAGTATATCATCAGTACCTGCCCACACGCCGCAACCTCGCGAACA
ATCCCTCTTGTCAGGTACACCAGGTAATCTACCACAGTGACAACCGTGAA
AGTAGCGTGTAGTCTCAACCACTCGTTCTGCGCCACGATACGAATTCCTC
TCTCGCGTTGTGCTCTTGTAGGAGGCTCAAGCCAACAGTCCCAACGATCG
AAACGGCTACTGCTGTGACGACGACGTCGATGCCGACGGAGGTGGGAACA
GCATCGACAAGACCGACAACAGCAGCAACAACGGCAGCGACAGCGGCGAA
GACGTCAGCAGCGACGACAGCGACCTAGAGGCACAGCGGCGGGAGGCAAC
GGCCGTGTAGACGAAACCCGCTCTGTTCTTCTGTCCCGTTACATCACAAC
ACGGTGTGTGTACGATACGAGAAGAAAGCATTCTACAAATTTAGAGAAAT
TTTAGTATTTTAGAGTAAGTAGCTTGCCTCTTTTATTTGTTGCCGAGAGC
GGAAGCAGTGTGCCAAAGAGTCTTCCTGAGGTCCGCATGGCTTTGAATTG
GTGTGCCATCTACAAGGGTCGATGGGATTACTAAGGGCGCCGACACCAGG
GGAGGGTGGAGAGTTGTGCTTGCGTCAAACACGATGTTCAAGTGTCAAGA
TAAAGTATATCCATCGCGTTTAGTAGCGGAGTAACGTGCGATGCAACGCC
GTTCCACGCGGATTAGTCCATGATCTTTTAGAATCACGCTGTGCTGCAAC
AGTTCCGCTGCGGCAAACGTATCCCCCCCACCACTGTGTAAGCCACATCC
CTGTAGACCTTCGAGCATTGACGGAGACACTTTTTTGATCTCTTGGCGTG
CAGGGCGAAGAAGGTTGTTTCATGGGGCATTGATCGCCTCTGTGCGAGTT
TATGAGACCGCAAATCTTGACAACAAGCTGTCAATAGAGTCAACCCCCTT
ACCTTCAACACCCTTGCCTTCAGCACAGCTGACACGGTATCCTCACGAAA
CAGTGGCTGTTGGTCCACAGCCTCCAGCGGTGAACTCAGCGTCCCTAGGT
ACATTAGCGGATGTTGCCGCTGCACAGACGAGACGACTCCGGTTTCTATT
TACTGACAAAAAAAATGGGGTTGTTGGCCATTTTCTGCGCATTCACCGTG
TGGGAGATTGTGTTGTACACGGTGGTGACTGTGATGGGACAGGGGGGAGC
AACAATACTGCTGTTCACGACGGAAACGATGGGGTACAGTAGGTGGCAGG
CGTTGGACGTCAAGCGTCACATAGATGCGGACACTAATGGAGAGGAAGGC
AGCACCTGCGGCGCAGGAGAGGTCAAGGGTTTGTGTCGTACAGGTTTTCT
GTTGTTTGACGACGAAAAACGTTCTTGAAAGCCCCCCCGCCCCCCCCCTC
TCGTCAGCTTGGATTTCTATAACCCGTTTCGAAGGAAAACTCGATTCTTC
TCCGGATTTCCGTCGACAAGGTGGTTGTTTACGGTGATTTTGGCGTGACG
ACATCTCGGGCATTCTTGGGACGAAGCCATCATCTGCGTTGTTTACACCC
AGACGTACGATTCCGTTGTCCCTGAGTGTGATATCTTCGTGTTGTCTGTG
TTTGTGGCGCACGTCCCCGCAGTAAGTTCAAGCCCCCTTCGTTCTCCGCC
CGGGGGATAGGAAATCCGCACCATCAAATCGTTCAGTGAGTTCCGCCCTC
TGTCGGTTCCTTGCACGTGCTTGCTCAGGCACGTTTGGAGACTTATGCAG
TTTCAACTAAGCGTGGCGTTGCTTAAAGCCTTTTTCGTATCCTAGGTGTG
GTGCATATTACCTCGGTGTTGGGGGGCAGATGGCCCCCAACAACAACGCC
AAGCTGATCGCCTCTACGGCCAAAATTGTGCATCTTGGTGTTATCTATCG
TACCAAGAACCAGTTATCCAAGAGAGGCCGTTTCGCGTGCCACCATGATG
TCGAAAGTCCATGGCTCCGTCCGGCGGTTGGCTGCATTCTCTTAGCGCCA
CATCCTTACCAATGTGAGAGGACCTGTTCTGTGGCCCAGAAAGGATACAC
GTATCGCCAACACCGACACTCCGACTCCGTACACCTTTCATTTTCTTGGA
CGACTCACATGCACGCCGTGAAAGGCGACGCCGTTTGTGCGGTCTCCAGA
TATACAGGAGGAACAGTTATTTCGCAAGAGATGTTCGGCGCAACACCCGC
GAGTTGCGTGGTGCCGCAATGTCCGATCCCGCCGTTAGTTTCTTCTGTAC
CACCGTTGTCTTCATACTCTGATATGCACTCGTTCTACAGTACCAGCCAC
CCCAACACACACATATCCACCTCATCTACAAAGGTACACTGACTTCATTT
GAAACACGCATATCCGTATCATCTACCAAGGTAAACTAACTATTCCAGCT
GGCACTCTCCTACCCCGCTACCTCCACTCGCCTCCACCAATATCGAACTG
CTCAGCTTTGTACGCAGCGTGACTGGTTGTTGCATGGCTGGGTTCCAGCA
TTCCACAACCAAATAATTTCGACTGCTGTTCAAGGAATGGTATACACACC
CATCCACACTCTAAGGTAAGCGAGACAATTTGGGGACAAAATGGAGAATC
GCTCAATTAGCCCAGAAGAACGCTCTACATAAATGCATTCTTGGCAGCGT
TGGGTCACTTGCTTCCCCGCCATACGTACCACGTCATTACCTTTCCGTTC
TCATATTTCAGACTGCCACAATCGACTTCGTTCCCTTGACTGCGAACGAG
GCATGACATTCTCAATAGGAGGGAGTCTACAAGTTAGGTTGATGCAGGAA
GCACATCGCCAACAACCGAGGGTTCAAGGGCGGGAAGATAAGGTAGAAAT
ATCTCACTTCTGCAACATGTATCAAGCCATGCTCTCAGCATTGATTGGCC
TTTTCACCATATCGTGTGTACCGGCACGAAGGATCCAACAACATCTCCCG
CCTTTCACATGAGAAGCATGCCTCATGAGCGGAATATGGCATGTCAGGAG
CGCCTGTTGGAGTTACGGCGCGATTTTCCGACACAACCATAGCACTTGTA
ACCTTGTAGCTTTGGCCCATTCCTTGAGACTTGTCCCGCTTTCTCAGAAA
CTGCTTCTTGTGTTCCCCGCAGTACCACCGACCACAGACGCAGCAGACGC
GTGACTTGTGCGGTTGCCGAACACGATGCCCGCGGGAGTCGCAGCAGATC
GCGCTACAGCCAGGCGCAGAGCATCGCGCATCAGGGTACTTGGACACCTT
CACACCCATCCTGAAAGGGGTGTACTCTGCACGTCGGCACCACCGGTACG
GCAGCTTGGCTTCTGAGAAAGTCAGCACGAGCGAAACGCCAGGAAACCAG
CGAGAAGAGAACATCGACAGGTAGGTTACATAGCTGGCGTCATAATACGG
ACAGGCTTGTGGGTGTGGCACGGGGTCACAAACTAGGGGAGGTGTGCATT
GCCGCGACATATCTGGGTTGGGACAATGTGTTCCAGTGAAATTCGACACA
TCACAATGTTGTGGGAATGGACGCATCTCCTTTCTTAGTCAATGTCCGGT
ATTATTAGCAGCATCCCCATTCTGCGTGTTATGCTGAGACTACCGTGGTC
GGAGTCGATTGACGCCTTGGAAACACGCGACCAGATCTTCCGTTCATCGG
ATCCACTCCGTGCATATTGCATAGAAGAAATGTCCCACACCTTGAATGTG
TGTGTAGAAAGCTGTACAAGCCTTGTAAGACCGAGTATGTCTCGAAATCA
TAGGCTGGAAAAGGCTGCACCCCCGCCGGGAACATCGACTGGGTCTAGTG
TCTAGTGCTAGGACGTTTCGCCCAGTCTACGGAGGGCCCTCGAGAAGCTG
TTTTGGATACTCCACAATGGGTCAGACGCTTTGGTGCGCTCATCATATGC
CTGTTTAAACATCATCAGAGCCGTTGCACGGCTCGACGCCCACAGATCAG
TGGTCGCCCGAAGTCGACATGCTGGTCTGGATAGGCACGCCGTTCAGGGA
GGACCGGGTGTTGCGGCACGTTCTACTAGGGGCGAAGAGGTGCATGGGTA
TGTCATGGAAGCCAATAGGACGGTAGCAGACCCACACGAGGTCCACCGAG
TGGCTACGGAGGGGCCGTAGAGCGGGGAGGGTCGGGAGAGGAGGCAAGCA
GAGTTTCTGTGTCGATTGGTTTTAGTTGTTGTTCTCTGTTGGTCCTACAG
GCAACTTCGGCATTTCGTAGGCGTCTGGAGATGAGTTTGAGAACAAGGCG
GGGGTACCTTGTTAGATGTGCGCAGGGTTTGTCGCATTGATTCGATTTGT
GAAGAAGGGCTTCTCACGCCTCCAGGGTTTTGAGGCGCCTGAATCATTCG
ACGGCAACCCAACAATGAGCAAGTTCCCTAGCAATGCTAGGTCTTCTGTT
GTCCCTTCTTCTGGCATCGTCTGTGGTCACGGAAGCTTGTCTCCAAGCTT
GAAGACAAGCATGTGTCCATTTGTGAGCAGAAAGATCGGTCTTTCTCTTT
CTCTGGTTTTTCTTCTCTCGCCCAGCAAGAACAGATCAAACTCGCTTGGA
ATGCAGAGAGAGAGCCCCAACCTCACTGCGCACGTTTATTATTCTTGATC
GCTCTTGATCGCTCTCAAGTTGGGTGTACCAAGCGGTGGGTCGCC
back to top

Coding sequence (CDS) from alignment at chr_00:11224527..11236471-

>Ec-00_007140.3 ID=Ec-00_007140.3|Name=Ec-00_007140.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1533bp|location=Sequence derived from alignment at chr_00:11224527..11236471- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCCTTCGGAGGGGACGGATACCGGCAATCTTCGGCTGTGGGGTGCGAT
TGGTTTCGGGATCGCCTCGCTCATCGGGGGCTACGTGTGCGACTCCTACG
GCGGCAGCTACACCGGGGTCATGATCGTGTTCGTCGCGAATGTCGCGGTG
GCGATGGCGGCGTCGACCGGCGTTCCCATCGGGCGACGAGGGGGCGGAAC
CGCCACCCGAGACAAGCAGCTTGGCGGCGGCGGCGGCGGCGGCGGCGGCG
GTAACGGCGTCGCTACGGGAGGAGACTTCGAGCTCGGCGAAAAGAGCACG
GAGAGTCCCGTGTCTCCTCGGACCTCATCCCGAGGCTGCGCTGTTGCTCG
TGACAAGACGGAGGGAGAACCGGAGTGCGGCGGTCTCATCGGAACTGCCG
CCGTGACCCCAGCAGTGGCCACCGATACCGCCGCCACCGCTGATGATATT
AAGCTCCATCTCCGCGACGACGACGAGCCCGAAGGCAACGACGAAGCCCA
AACGCACGCCGCCTTGCTGTCCCGCCCTAGGACGACCTCGGACAAGGACG
GGGGCGGCGACAACAACGGCAGCAGCGGCCCCAGCAGAGGTGATGGTGAG
GGACCCGGGGCGAAGGCGAAAGAGCAGGAGGGTGTGCTCATGGCCGTCCG
GATCATGATGTACACGGGAGAGAGCGCTTCCTTTTTCATGGCAGTGGGGC
TCAGCGGCATGGGAGCGGGCGTGATCGACACGTTTCTCTTCATTAGGCTG
GAAGAGCTCGGGGGTTCGCACGTGCTGTGCGGGCTCGCGCGTCTCATCAT
GTGCATCGCGGAAGTGCCGTTCTTCTACCTCTCGGGGCCTCTCATCAGGC
GGGTCGGCGTACGGGGAGTGATCGCCCTCACCCAGGTGGCCTACCTGACT
CGCTTCATCTACTATTCGGTGCTACGAAAGCCGTGGTGGGTCCTCCCGGC
CGAGGTGCTGCACGGCCTGACCTTCGCCGCAATGTGGGCAGCCACCACCG
AATACGCGCACGGGATCGCTCCAGCTCACTTGCGGACGACGATTCAAGGA
GTCGTGTCCGGGATCCACTGGGGCCTGGGCTTCGGGCTCGGGGCGATGCT
GGGAGGGCTCCTGTACGCAGGCCTCGGTGCTTCTAGGTGCTTCGCCGTCA
GCGCCGCTTTGCCTTCGCTGTCCCTGCTGTTGCTGGTCCTTCCCACGGCG
AAACGGTGGATCAGCGGCACCGACGCGCGCGACGGGCGACCGGGGGCAAA
AGGTATGCCACCTGGTAGCAGCCGACGGTGCTGGGGCGGCTGCTGCGGCG
GTGGTGGCGATGATGGGCGCTCTTCGTACGAGCTCGTTGCGAAGGAGGCT
CAAGCCAACAGTCCCAACGATCGAAACGGCTACTGCTGTGACGACGACGT
CGATGCCGACGGAGGTGGGAACAGCATCGACAAGACCGACAACAGCAGCA
ACAACGGCAGCGACAGCGGCGAAGACGTCAGCAGCGACGACAGCGACCTA
GAGGCACAGCGGCGGGAGGCAACGGCCGTGTAG
back to top
Synonyms
The feature 'Ec-00_007140.3' has the following synonyms
Synonym
Esi0534_0004
Esi_0534_0004