Ec-00_006930.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_006930.1
Unique Name	Ec-00_006930.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	233

Homology

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BLAST of Ec-00_006930.1 vs. uniprot
Match: D7G3S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S4_ECTSI)

HSP 1 Score: 375 bits (963), Expect = 2.760e-130
Identity = 220/232 (94.83%), Postives = 220/232 (94.83%), Query Frame = 1

Query:    1 MRQMKGAATKTPRVSQELEDVMQAIRELNIDRGSDLWETFRDISKQETRSLGPKGYKISAISGAELGVLPASAKKAHDVQADVWLVGSRQEAANGFEGVDDATKKLTTATQGNDNSSAKIAEEADLAGVVKRLTNLSFEETEKGSQREDASDDEDAALTVAEVAQAAXXXXXXXXXXXXXXXXXXXXPAVCQNDHDYEWLCAQLDTPCWRASTLADFTTDGRLPEWGVSEAT 696
            MRQMKGAATKTPRVSQELEDVMQAIRELNIDRGSDLWETFRDISKQETRSLGPKGYKISAISGAELGVLPASAKKAHDVQADVWLVGSRQEAANGFEGVDDATKKLTTATQGNDNSSAKIAEEADLAGVVKRLTNLSFEETEKGSQREDASDDEDAALTVAEVAQAAXXXXXXXXXXXXXXXXXXX PAVCQ           LDTPCWRASTLADFTTDGRLPEWGVSEAT
Sbjct:    1 MRQMKGAATKTPRVSQELEDVMQAIRELNIDRGSDLWETFRDISKQETRSLGPKGYKISAISGAELGVLPASAKKAHDVQADVWLVGSRQEAANGFEGVDDATKKLTTATQGNDNSSAKIAEEADLAGVVKRLTNLSFEETEKGSQREDASDDEDAALTVAEVAQAAXXXXXXXXXXXXXXXXXXXSPAVCQ-----------LDTPCWRASTLADFTTDGRLPEWGVSEAT 221

[Close]

BLAST of Ec-00_006930.1 vs. uniprot
Match: D7G8K7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K7_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 8.920e-79
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 1

Query:  124 DISKQETRSLGPKGYKISAISGAELGVLPASAKKAHDVQADVWLVGSRQEAANGFEGVDDATKKLTTATQGNDNSSAKIAEEADLAGVVKRLTNLSFEETEKGSQREDASDDEDAALTVAEVAQAAXXXXXXXXXXXXXXXXXXXXPAVCQ 576
            DISKQETRSLGPKGYKISAISGAELGVLPASAKKAHDVQADVWLVGSRQEAANGFEGVDDATKKLTTATQGNDNSSAKIAEEADLAGVVKRLTNLSFEETEKGSQREDASDDEDAALTVAEVAQAAXXXXXXXXXXXXXXXXXXX PAVCQ
Sbjct:    3 DISKQETRSLGPKGYKISAISGAELGVLPASAKKAHDVQADVWLVGSRQEAANGFEGVDDATKKLTTATQGNDNSSAKIAEEADLAGVVKRLTNLSFEETEKGSQREDASDDEDAALTVAEVAQAAXXXXXXXXXXXXXXXXXXXSPAVCQ 153

The following BLAST results are available for this feature:

BLAST of Ec-00_006930.1 vs. uniprot

BLAST of Ec-00_006930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G3S4_ECTSI	2.760e-130	94.83	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G8K7_ECTSI	8.920e-79	99.34	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:10982644..10996587 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Length	699
Hectar predicted targeting category	other localisation
Gene id	Ec-00_006930.1

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_006930	Ec-00_006930	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 10982473..10997428 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006930.1	Ec-00_006930.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 10982644..10996587 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006930.1.1	Ec-00_006930.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10982644..10982652 +
Ec-00_006930.1.2	Ec-00_006930.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10987931..10988043 +
Ec-00_006930.1.3	Ec-00_006930.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10991882..10991974 +
Ec-00_006930.1.4	Ec-00_006930.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10992202..10992270 +
Ec-00_006930.1.5	Ec-00_006930.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10992520..10992592 +
Ec-00_006930.1.6	Ec-00_006930.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10993061..10993131 +
Ec-00_006930.1.7	Ec-00_006930.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10994414..10994561 +
Ec-00_006930.1.8	Ec-00_006930.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10996003..10996035 +
Ec-00_006930.1.9	Ec-00_006930.1.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10996279..10996344 +
Ec-00_006930.1.10	Ec-00_006930.1.10	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10996564..10996587 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006930.1	CDS:Ec-00_006930.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 10982644..10982652 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:10982644..10996587+
coding sequence from alignment at chr_00:10982644..10996587+

mRNA sequence

>Ec-00_006930.1 ID=Ec-00_006930.1|Name=Ec-00_006930.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=233bp
MRQMKGAATKTPRVSQELEDVMQAIRELNIDRGSDLWETFRDISKQETRS
LGPKGYKISAISGAELGVLPASAKKAHDVQADVWLVGSRQEAANGFEGVD
DATKKLTTATQGNDNSSAKIAEEADLAGVVKRLTNLSFEETEKGSQREDA
SDDEDAALTVAEVAQAAAALADAVAAAVAEAGTGSGSPAVCQNDHDYEWL
CAQLDTPCWRASTLADFTTDGRLPEWGVSEAT*

spliced messenger RNA

>Ec-00_006930.1 ID=Ec-00_006930.1|Name=Ec-00_006930.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=699bp|location=Sequence derived from alignment at chr_00:10982644..10996587+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGGCAGATGAAGGGTGCGGCGACAAAGACACCGCGAGTTTCTCAGGA
GCTGGAGGACGTCATGCAAGCCATCCGAGAACTCAACATCGACAGAGGGT
CCGACCTATGGGAAACATTCAGGGACATCTCCAAACAAGAAACGAGATCC
TTGGGCCCGAAGGGCTACAAGATTTCTGCCATTTCCGGGGCAGAGCTTGG
AGTTCTTCCGGCCAGCGCCAAGAAGGCGCACGATGTTCAAGCCGACGTGT
GGCTAGTCGGCAGCCGCCAAGAGGCGGCCAACGGATTCGAAGGCGTCGAC
GACGCCACAAAGAAGCTGACGACAGCGACCCAAGGCAACGACAACTCATC
TGCGAAAATCGCTGAGGAGGCAGATTTGGCGGGAGTGGTGAAGAGGTTGA
CCAACCTCTCCTTCGAGGAGACAGAAAAGGGAAGCCAGCGTGAAGACGCC
AGCGATGACGAGGATGCCGCCCTCACGGTAGCGGAAGTTGCCCAAGCAGC
CGCCGCCCTGGCAGACGCGGTAGCTGCCGCCGTCGCCGAGGCCGGTACCG
GCAGCGGTTCCCCTGCGGTCTGCCAGAATGACCACGACTACGAGTGGCTG
TGCGCCCAGCTCGACACCCCGTGCTGGCGGGCGTCCACGTTAGCGGATTT
CACGACCGATGGCCGCTTGCCGGAATGGGGAGTCTCCGAGGCGACGTGA

protein sequence of Ec-00_006930.1

>Ec-00_006930.1 ID=Ec-00_006930.1|Name=Ec-00_006930.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=233bp
MRQMKGAATKTPRVSQELEDVMQAIRELNIDRGSDLWETFRDISKQETRS
LGPKGYKISAISGAELGVLPASAKKAHDVQADVWLVGSRQEAANGFEGVD
DATKKLTTATQGNDNSSAKIAEEADLAGVVKRLTNLSFEETEKGSQREDA
SDDEDAALTVAEVAQAAAALADAVAAAVAEAGTGSGSPAVCQNDHDYEWL
CAQLDTPCWRASTLADFTTDGRLPEWGVSEAT*

mRNA from alignment at chr_00:10982644..10996587+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_006930.1 ID=Ec-00_006930.1|Name=Ec-00_006930.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=13944bp|location=Sequence derived from alignment at chr_00:10982644..10996587+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCGGCAGGTGTGTGTGTGGGTATTGTGCGGCGGTGGAGGACAACGGAT
CCAGTCAAGTACATGGGTTCCCTTGACAGCGCCGTATGCGCGAAGAAAGC
CGCGCCCCTGTGCACAGCAGTAGCGTGGACGGAGAAAGCTCGTGGTGAGG
TGATTGGAGAGAGGACCAATCTTGTTGATTCGATCGCTAGAATGGTAGAC
TACATCAGCAGTGTTACTGTAGACTATAGTACACACACACACCACCCTCT
CTTCTCTGGAAGACCTTGCGTATTTTCTCGTCTACCAGATGAGGAAGTGA
GAGCCTGATCGGTCCTCAAGGCATGCTCTTGCTACTCCTAGCGTGGAATA
GTCATAGTTCCGGCATGGATGTGTGCCTTGGCGTGGTTTATCCCCCCCAG
CTTTCAATGACGGCTTGGAGTAGAGAGGCTGGAGCGCACAGCACCCGTCG
GCGAAAGAGCTGCTGAGGAGGTACATAAAACATGGTTGTTTTCCAGGCTC
TCTCAAACGAAGAGTGGGAAGGAATGCCAGTCTACAGATAAGAAGATGCT
GGAGAGAACATCATTGAATACGAGTGATCCCACGTGCGTGTGGCACACAC
TGCTGCTGTACCGATTTACCGCCGAATTATGTATGTATGTTGCCAGAGGA
AGAGTAGAAACACCGGTAGATCTCACGACACTGCTGTGAATGTCATCGCT
ACAATTCATCCTACGAAGACCTTCTCTCAAAATATTGACAACAGATTAAT
GAACTTTGCATGCATACATGATACACTGCTCAGTCCGAATTTCGCATTTC
GTACACCAGTGTTTTGTTTCGCAGCAGATGTACTGTAGGTCTACAATAAA
TAGCTTACCCGTTCGGGGCAATCAACGCCCCAATCAAACAGATGTGTTCA
AGTATGCACTACAAGTGCTGAGAAAAACCTGCTGGGTCTCGAAGTACTTA
CGTATGTAGTTGGGTCTGTTTGAGCCGATACAAAGGAAGATCGGTGACGC
CAGCCGGCACAAAAAACATCCCCTGCCGGAAGCTGTTGGGTTAACGAAGT
AACACGTCCTTGTTTGTTTTTAACCCTTACGTGACTGGGTAAATTTGAAT
TTTTGGTTTTTTCTCCACAACTGGCTCTCTGCGGTTAAAGATCTTCAATT
CATGCGTGTACACCCACAAATCACGGCGGCAAGGATGGTTCAGCAGTGAG
TCCATGTGTGGGGCTCACAAGGATGGGGGCGCGAGTATATGTAAGGGTCA
CGCACAGGAGTACTACACTGCTGTACAGCAGTATCTCGTGTTCTATATAT
ACTCACAGGATGGTCGTCGTGTCGTGACACATTTCTTACTATTAGTACAA
TTTTATGGGGAAAAAATATACTTCCAAGTGTATAACTGGATCGGCTCGAT
GTTTTTGGGGGGTACAGCACTGTGGACCAGACATCGACCAAGAACGTTTG
CCTACCGCGACGACCATGGGTGGACGGGATAACCCCTACGACGGCGAAGC
ATACTTCAATGCGATGCTAACAACCGTGCGCGTGTGGTGCACTTGTCACA
TGATGCTGCCAACCAACAGATGCACGTATACGTGTCGCCATATTGTGGTC
GCCGCGCAAAGAAATGCCTTGGGAAGATCTCCTACCTGGCACTACTACAA
GGAAACCGAAACGTAACGATGGACACGGCAATACGCACTCCATTGCCGTG
ACAGAGTTACTCCTATGCTCGAGTCAAAGCGGAACACCTCCTGTCGACAA
ACGTTGCGGCACGCTGCGGCAGTGTTCACGACTATTTGGGTGATGTCTTA
CACCTATTTCGAGTGCTACTATGGATCGTGCAGAACGTCGCGATATCTCT
TTATGTGTACACTACCCAGGGCTATGCAAGTACGTGAGTGCCCCCGCGTA
GCTCCACGTATATATGTGCTTCCTGACTTCTCAATCCATATCGCTGGGCG
TGAAGTGATCTTGGTGCGGCCCAGTACCGCCTACGCGTTTGGATTATGTC
GTACACCTTTGTCGTGTGTCGCTGTGGATCTTCCAGACCGTAGCGCCATC
TCTTTGTGTCCATCAGCAGTTTCACATATTTTGACTTCCTCTTCATTCAT
GCATATCGCCGGCATCAACGTTTCTTGGAGCTGCCCAGTACGACCTGCTG
CTCTGCGCGTAACAGTACGAGGCAGTATCAGGAGCTACCTGCTGCTAACT
GCTGCTGTCGACTATGCTGCACTGCACGGCGTCTCTTCTTGGTTTCCAGC
CGTCCAAACTTGAAGTACCACCAGTCGCAATTTCGGAGTTTTCAAAAACC
AGTTTTGATTCATCATGTTGATGGCCTTTTTTATCATCCCGTGGATCGAA
GTCCGCTGGATCTTGAGGAACTTGATAAATTGCTTTGCTTTGATGGGATT
AGACCTATGATCCTTTTTGGAACAGTTGCTGCTGGTTGGCCGGACCACTG
CTCGGCTCTTTCTTTTACGTCTATATGCTTTATCGACTAATGGAGTACGG
CCGTCTTCTTTCTTCTTCTTGTTCTTCACTTCTTCCCACACCCTCACCGC
CATCCGTCTGGTTGTGGCCGCCCACCCCATTGGGGGGCGGGGGGCCAATT
GTTCCCCCTAGTAGTAGTTATGCGGAGAAAAAGAAATTTGCAGCAGCAAT
ATTTCTAAGCAGGTGTGGATGCCTGTCTCCGACAGCAGCCATCCGCACAG
AGGATGTACCTGTCCAAGCAAATACCTGTTGGCACATCTTCTCCGCCTCA
TCCTCGGACAGAGCATACGGCAAAAGGCGCGCATATGCTAGCAGCGCTAG
ATGCGAAGACGCTGACGGGAAACCGCCTCACAGAAGCGCCCAGGATCGAT
GAAAAAAGTAATGACCCACTCAGAGAACCGAGACCATCACCCACTATCGC
ACATAATGCACACAAAAAATCGATACATCTTACAATTCTGTACTAAAAAT
AGATGACAGTGATCGGAGGTGTGATCGGAGGTGTATTCGTGAAGACCCTT
TGCCTTTGAGCGAAAAGTTGCACACAGCAGACGAACCTCCTTGACGCCCA
TTACTGGGAACCACACGCACCGCAATCACAACAAACATCAAGCACCGAGC
CAGTACATTCGCATCGGCTCCGGTGTGCGTTTTCTCTACTCTCCCCCGCG
GATGCGGCACCGGGTCGATCACATGTTGAGGGTGCTGTATGTACCCTCCG
GTGGTATTTTGCGTTTGAATCTTACAGTAGTACCGGTAGGCAGTAGATTG
GATCTGGGAAGGATATCTGCCCCATATCAGAGAGATTGGGCATGCATGGT
GAATAGTATCGTACTGTGTGTCCTGTGCGCATTGGTGGTACGCGTGCTTC
TGGGGTGTGCTGCCTCTGTGTCTCACTGCTTATCTCTATGTATGTTCTTC
GCTCTTAAGCGAGGCCCAACGGCGATCTTTCGGCACGCAAAGTGATCGGA
GCTGAGAACGGAGCTAAATCGGCCTAGAGTCACATAAGGGTTAAGACAGC
AAGCCTTCCTTGTTCCCCGCACTCTACCGACTTCTTTATCAGTTTTCTTG
TTTAAATTAGTACAGTGATAACGCCGGTATGTGCCCGGCGCATCGACCGG
CGCTATTCAGGGCGACTGGCGCTATTGGAATAGTGCCTCACTAGCGCCAC
AACCGGCGCTATTGAAGACTCAGAAACCCTCAATATCGCCGGTTGTGACA
CTATTGAGGGATTGTGGTCATGTGGCGCAGCGATTGCGCTTTACTGAGCC
AACAGATTCACCAATTGAATGGGAACGATTGAGTGGTGAAGTGGGCGGAC
TGCAAAGGATAAATTATGTTCCGGGACTGCCAAATTTGTTGTGTTTTGTA
ACTGATCGTCTAGAAAGACGGCAGCATACTGATCCTCCTGCATCACAAAT
AGGCGCGGTGCAACCGGACGCGTTGCTGTTACAGGAAGGACACCGCGACA
GCGGAATGACGACACAACTGCACCCAATGCACCATTGAAAGGAAAAGTTA
TTTGTAAAGAATCGTACAGCAGAAAAGAAAACATGTGGACGAGAAACGTG
CAACCGCAATCAATCGCCCCTCATCCATGTAGCGAGAAAGAACAAGAAAC
GACCGCGAAAGAAGCGCCACATGTAGAAAATCAGACACCAAGCCCGCGAT
TCCGAGAAGAAGCAGCACAGAATAACGGCTTTTACTTCACCCCCGAGTTT
TCTCTCCTCCTCATTCCGCTTCAATAACTTCCGTCGCAACAAACTCCCTC
AAGTTTCCTCAGGGCAGGTGCGTGGTATGTGTTTGTGTGTGTGTCAACAA
TACGAAAAACGCGCTATTGCCGGGTGTAGCGGAGCCCAACCCGGCGCTAT
TGCGGGCGTCCCTCAATAGCGCCAGAAGCCCAAACCGGCGCTATTGCGGG
CGTTCCTCAATAACGCCAGTCTGGCGCTATTGAGGGCTCTGGCTGTGCCC
TGAAATTTCACCGCCGCAAAAGAGCCCCCCCCCTATCACAATTTCATCTT
ATACTACTATTCCTATATTGCTTGTTTGCTTGTTTAGGTTTTGACCAGGA
AACCTTAAGAATGGTGTGCTTTCATTGTACTTGGAAGCGTTGAATTGAAA
AAGAATGGTCTTCGGCAGGACATGTCCATAGGCGAATGCCCAATTTTCCA
TTCCATGTTGTAAGCTTACGAGTACATCTATTTAGCATCTTACAGTCCCC
CTACTCGTATGTACCGACGAAGTGATACGACCAGTTGATTGGAAGCCACC
TTACACGCGTATTATTCTTTCTCCCGAGACAAAACGAGATGTACCTGCAA
ATGTCCAGGCGCTCTCAAACATTTTTCTATTAAAGAAGGATTTGTTATGG
TCCATCGTTCTCTCTCGATTCTATTACACACCGAAATTGTATTCGCAATA
CACCGAGCTGCCCGCCTGAGGCGAATTTCTTTGAACTTGATAGTTGTCGC
GAGTACACACCACAAAAGAGGAAAGACTGCTGAACGAATGAATCTTTCTT
GCGTCAAACACTGTAGGCAAGCATCGCAGGAGGAAAGATGGACAGGTGAG
ACATTTCCTCCCTTGCGGCCCCGGTTGGTGCATCGAGCTTATACCGAACG
GTGTAGACCAGAATAGACGGGAAGGGAACAACACCAGCATAAACCCCTTC
CAAAAGGCCAACCTCGAGTACGCTTTCGTTAGTCTACGGGCACTAACTAA
ATGCTCAGGCACGTTGTTTCACTTAAGTGTTCTACCCACTAAACGAGTAG
ACCCGCCCCCCCCTGATGACATGCCACCACCTGCTAGATGAAGGGTGCGG
CGACAAAGACACCGCGAGTTTCTCAGGAGCTGGAGGACGTCATGCAAGCC
ATCCGAGAACTCAACATCGACAGAGGGTCCGACCTATGGGAAACATTCAG
GCAAGGAATGTTTGCTGCAGGCTCACCTCGCCACACCTCGCCACCCCTGC
CGTTACATCTCTCTTGCTGTTGCTCCAGGAGGCCACCATCACTCCTACAG
CGGCCGAAGAGGAAGTCATCTGCCTTCACCCGCAGCTGGCTGGGTAAGTT
TGCTGCTGTTCGAGTGGCCCTTGGAAACGTGTGGCTCCCCCTCCCGACTG
AGACGCGCGTTCTTGCACCATGGCCAATACTTTGCCCTCTGCCCCACCCA
CCAAAAGCCTAACATCTCTTCTTCCCCGTGCTTGCTGATCTGACCTTGCC
CCGTGGAATTCAATGTCGTTACACACGTTGTGTGAGGCCGACTTCCACTA
GGACTTCCCCGAGGAGCATGCACACGAATCTGTCGAGAGTTGTACGTAAT
TTTCAGCTTTCCTATGTTGTGGGGGTGTTGGGGGATATTTCCCCTACCTT
GAACTGAAGTACGGCGTAAAGGGGGGCCACCATACGATATGCTTGAAAGG
AAAGCCCTGATCCCATGTGCAATACTACCCTTGTAGGGGCCCACACACAA
GCACTTCCCAACGTCCCCCTTGAGCCCAACGGCCCCCATGCGCTCTGCCG
AGAATCTCATCTCAAGAAACGATCTTCGTGGGATTGTCTCTTCGGGCGTG
TTGATGTTGTGCATCAATATTGCCTGGGGAATCGTGTTTCGATTTCCGCT
TTGAGAGCAGCAGACCACGCATGGGTCGCCTTTGTGGGCTGGTCGAAGAA
CCAGTAGTCTTGTTGCGCCTGCCTTTCAGCTCCGCTTCTTTCCACCAAGA
CTGCTTCTGCCAAACATGTGGCGCTTCTATCAGAGACAAGGCACCTTATT
CAGGATAGAGAGAGACGAGGGCGGCACTTGTGGCACGAACCTAAAGCCCA
AGTTCAACTAGTGCGTGTGCCGCTGCCTCAGTTGTAGCATCTTAGAGATT
ATCGAGTCGCCAGACCACTCCCTTGCACGAACGCCTGGTGTGTAAGGGCA
CGTAGTAGTCATGTTTTGCACACCGTAGTGGTTAGACCATTGGCTGTAAC
GGGGCGCGGTATATGGTTTGTAGAGTATCCCAACAACGAGTTGTCTGGCA
AAGTGTCGGCCCGTCCGTGTAGCGACGGGTTTTAAGGACAGGGCATGCTA
TGTATCTCGTAGCTAAGTATGATGTGCGTGGTCAATCTCGCTATATCTCT
GTGCAGCAGTTGTATTGTGTACCCGGCTTCCATGTGTATCTTCAGGGCGT
GAAGTAGAGTTGAACTTGTCGGCGGGAGTCCAGACGGGACTCCCTCTCCA
GCTTCGTATGGCGTTGGGGATAGCTCGATGTTGGATTATTTTCGACGCAG
TGGCATCCCTGTAGTGCGTGATGTGTCCGTTTCACCTTCTAAACCGGAGC
GATGGGCTCTAGGCTACGGTCTAGTTCGATGAACGTTGGTGCCCTTTCGT
GTGCCCTCGGACGTGTTGTTCAGGAGATAGTTTGCCGTCGCGAGTCGTAA
TCCTGGCCGTATTTTTCCATATTTTGCACTCATATTTCCTGTCTGCCTTG
TACTACAGCTACCTTCCTTCTTTCCTTCCTACATGTTTCGAAGTATGTAA
GACTTCCCGAAGTATACGTAGATGAATACTGTTGAGAGCAGATGGTACAT
GTTTTGAGGTGGACCTGTTGGGGTGATGCAGGGTATTCATTTTTCCTTGT
TCGTTATGCCTTTGACCTATGTACGATAGGACTCCAGAAGCCGTTTATTG
GTGCATATGTTGAGATTTCCAGTTTGCCTTGTAGTTGCTGCCTAGTCTTA
ATCTCCCACCGTGGTACGTAATTTTCATCTTGCCTATCTTGTGGGGGTGT
TGGGGGATATTTCCCCTACCTTGAACTGAAGTACGGCGTAAAGGGGGGCC
ACCATACGATATGCTTGAAAGGAAAGCCCTGATCCCATGTGCAATACTAC
CCTTGTAGGGGCCCACACACAAGCACTTCCCCATGTCCCCCTTGAGCCCA
ACGGCCCCCATGCGCTCTGCCGAGAATCTCATCTCAAGAAACGATCTTCG
TGGGATTGTCTCTTCGGGCGTGTTGATGTTGTGCATCAATATTGCCTGGG
GAATCGTGTTTCGATTTCCGCTTTGAGAGCAGCAGACCACGCATGGGTCG
CCTTTGTGGGCTGGTCGAAGAACGAGTAGTCTTGTTGCGCCTGCCTTTCA
GCTCCGCTTCTTTCCACCAAGACTGCTTCTGCCAAACATGTGGCGCTTCT
ATCAGAGACAAGGCACCTTATTCAGGATAGAGAGAGACGAGGGCGGCACT
TGTGGCACGAACCTAAAGCCCAAGTTCAACTAGTGCGTGTGCCGCTGCCT
CAGTTGTAGCATCTTAGAGATTATCGAGTCGCCCAGACCACTCCCTTGCA
CTAACGCCTGGTGTGTAAGGGCACGTAGTAGTCATGTTTTGCACACCGTA
GTGGTTAGACCATTGGCTGTAAGGGGGCGCGGTATATGGTTTGTGGAGTA
TCCCAACAACGAGTTGTCTGGCAAAGTGTCGGCCCGTCCGTGTAGCGACG
GGTTTTTAAGGACAGGGCATGCTATGTATCTCGTAAGTATGATGTGCGTG
GTCAATCTTGTTACATCTCTGTGCAGCAGTTGTATTGTGTACCCGGCTCC
CATATGTACCTTCAGGGCGTGGAGTAGAGTTGGGCTTGTCGGCGGGAGTC
CAGACGGGACTCCCTCTCCAGCTTCGTATGGCGTTGAGGATAGCTCGATG
TTGGATTATTTTCGACGCAGTGGCATCCCTGTAGTGCGTGATGTGTCCGT
TTCACCTTCTAAACCGGAGCGATGGGCTCTAGGCTACGGTCTAGGACGAT
GAACGTCGTCCTCGGTCGGAAATTGTTTTTCTTGTTTGTTGGTCTGTTTT
TCAGGAGTTGGTTGCCTTCGCCGGTCGTGGGGCTTCATTCGGCCGTGTTT
TTCAGTGGTTCACGCATTGCTTGGATGTGGTTCGACCCTCACCACGGAAA
TGAAATCCTTGGCCTCGGAGCAGTGTTGGAAATTGTAGATCACGGGTCAT
GGGGGCCAATGCCTTTTTCGATATGAGACTCGCAAGTGGCGATGTGCTCA
CACGATCCGATCAAGAAACCTCGATCATCAGAAGGTTTGAATGTATGTAA
TACAGGTCTGCATTGCTTGTTTTCTTGTTTTGTCGGCGTCAAAGCAGATT
TTGTCGCAGGTCTGGCGCATCGAAATAGACAACATAAACAAGCCTCCCTC
GTTCGCTGTCGCCCGCTGATATCCTTGTTCAGGGCGATGTTAGTGCTGCC
TGCCGTTCTTTGCGGCCTTGCAGTTTCTCGACTCATATTGATCGAACGTA
GTCGGCGCCAATATTTCTGATGCTGATCATATGGAATCTGTCAGGTTGAC
GCTGCTCCTCAGTCATTATTGTTCGTGCATGTATGCAATGGGGCTGTACC
CGGTCCTCTCTTTCCTGCTAACTAGGTGCAGGGTCGTGTTTCGATCTAGC
TACGTGTTTTTCCTCTCGCCGTAACGAAGCTGGCACCCTCTCACTGTCCT
TCCCGATTGTTGTCGCCTCGTTCAACATGAGACGAACTGTTAGTGAAGCC
TTTTCATGGCAGTGATGATCCCGTACAGTTCATGACGCCAACCCTAGTGA
TGCTGCCGATGCTGCTTATACTGCCGATGCGATTGATGTCGATGTCGATG
CCGATGCTGATAGTCGTGACGACGATGACGATGCTGCTCGGAAGGAGCCA
GCAACTGGTACACACCGTACCTGTTGCTGACCTTGCAGTGTTGTGTTGTT
CCTGTTTTGCCCCCTTTGCCATGCTATCTTACCCGCAGGGACATCTCCAA
ACAAGAAACGAGATCCTTGGGCCCGAAGGGCTACAAGATTTCTGCCATTT
CCGGGGCAGAGCTTGGAGTTCTTCCGGCCAGGTGAGTACTATAAGTATAT
AGTCCAGAGAAACGGGTTCATTCATCGACTGACTCCCGACAACGTGTACA
ATGCTTGAGCTGTTGATCAACAAACAGCTCTTCATGTTCCGCTCAGCTGT
TTCGCTGGAGCTTGAGCTGATGGCTAGCTCCCGCCGTCGACGTTTCATCT
CGCCGTTGCCATTGGCCGCATCCTTCTCGTTGATGCCGCCGTTACTCGCG
AACTGCAGCGCCAAGAAGGCGCACGATGTTCAAGCCGACGTGTGGCTAGT
CGGCAGCCGCCAAGAGGCGGCCAACGGGTACGTCACGGGTTTTGCTTCCT
TTCGCGATCGCCTGACATCATGCATGTGGTGTGTTTTTTTGTCATGGACG
CCCGTGTACGCGCCGCTCTTTAGTCTCCCTGTATAGAGAGTTCGTAAGCC
GCGGTCCCGCCGCAGTTGCAGCGCAAAGGCTGGGTACTTTGTTGATACGT
GCTGTTACCATTTGAATACCTCGGCATAGTCTACAAGTCACGGGTCGATT
ATCTGATCTGACTTCACCTTCCTCAGATTCGAAGGCGTCGACGACGCCAC
AAAGAAGCTGACGACAGCGACCCAAGGCAACGACAACTCATCTGCGAAAG
TAAGTGACATCGGGCTGACGCGGTACACACGGAGGTGTGACTGCATACTG
CTAACTGCCGTGTGCACATGTTTGCTGTGATACGGCAAGATCTCCGGAAT
GAATTAGCTGCGGTCAGGCCACTACCAGACAAACACACAAGGTACGGCTC
TCGCACTTGGCCCCGTATTTTCCTTCTACAGTAATAAACCTGTCCCCAAC
CCGTTCAAATGTTGCCGTTGCCTCCTGTGGGCTGGCATCAGGAGAGGAAG
AGAATGCTGTTCGGCTCGACCCCGGTCTAGACCAGGCCGTGCCGCACGCG
TTGAGTCTCCGGTGTACGAATTCCTTGTCAAGGGCAAATCCTAAAGTGCG
CTTTCGGGAGGCTGTCGATGCTTGCTGAAGATCGCTGTTTCATTTGGGTG
TTCACCTTCCAAACCAGCAGTAAGAAGCCCTCTTTCCCCATGACATGCCA
CCGCTTGCCCGATGCAGATCGCTGAGGAGGCAGATTTGGCGGGAGTGGTG
AAGAGGTTGACCAACCTCTCCTTCGAGGAGACAGAAAAGTGAGGGAGTTT
GATACAGGCGTAACCCCCCCCCCCCCGGCGTTCCATCTCTCTTGCCGTTG
TTTTAGAAGGCCACCAGTACTCCTGCGGAGGCCGGCGAGGAAGTCATCTG
CCTTCACCCGGAGCTGGTTGATTTCATTTTCTGGTGTACGTGCTGGCCCA
CGCAACCCCTGTCTCCCCTCGATTGACAAACACGATCTCGTGTCATGGCC
ACTATTCTGCCCTCCATCCTACCCACCACATCAACAACATGTGACTTCCC
CGTACATAAACGCTGTTCTGACCTTGCAGAGCTCGTGGCATTGGATGTCG
TTTTCATTGCTGGGTTGTCAGTTCTCGCGTCTTTCGTTGTTGCCCACAGA
CCCACCCAGAAAGAAATGTAAGGAGACAAAGGCAACGGCAGTTGGCGCCC
AAGGCATTCTCCCACTCGCGCAATGTCAACGGAACCCAACACACACTTGT
CTAGATGCAGAGAAAACATGCCGGCTGGCGCAAAGAGCGGAACAGGAAGA
CAGTCCTTCCCTCAGAAATGGAGGTGTTTCCTACGACAAGATGTACCCGA
TCACGCTCGTCTCCCCGTTTTGCTTCGCGTAGATATGGAGGAAATGGAGA
GGGATACAGATATTTTCCGATAGTTGGTGCGCCCGCCGTCCCACCTGTTC
ACCCTTGTTCAAGGGCGATGTCGATGCTGTCTATCTGGCGCTGTAGAATA
TCCGCTCAGTCTTAAGCGAATGAAGTTCGATGCCAGTGTTTCTGGTGATG
ATCTTACATATTCAATATTTATTTAGGGTTACCTGAAATCAGGTTATCCC
GCGCCTCTCTTCCTGCCAACTGGTAGGTTTTCGGTCGTCTTTCGACCTGA
CTAGGAGCTGTTCTGCCAACCTCTCAACGTAACGGAGCTGGTGCCCCCGT
CTTGTGTTTCCCCGGTTGTTATCAGTAACTCGTTGATGATGAGATGAAAC
TGCAAGTAGGGATGACATTCACAGCCGTAGTGACCGGTCCTGTGCTGCCC
ATGATGCGTTTGGTACTATGCGCCTGATGCTGCCGACGTGATTCATGCCG
ATTCCGATGCCGACGCCAATGCCAATGCCGATGCCGATGGCGATGCTGAT
GCTGATCGGGCTGTTGACGGTGGCGGGAATGAGCCATCGTACCGGCACCT
TTTTTCTGACTCTGCATAGCTGTGGTGCTCCGCTATCGCTGCCGAAACCT
CAACATCAATCAACGATACGATACAGTAAACCTTGTGTATTTCCCATGTC
TCGGTCTTGGTGATGAACAGGGGAAGCCAGCGTGAAGACGCCAGCGATGA
CGAGGATGCCGCCCTCACGGTAGCGGAAGTTGCCCAAGCAGCCGCCGCCC
TGGCAGACGCGGTAGCTGCCGCCGTCGCCGAGGCCGGTACCGGCAGCGGT
TCCCCTGCGGTCTGCCAGGTATAATCGATGAGTGGCGTGTTCCTGCGTTG
GTCACGCCCAGCTACCACTGTCAAGCAGTTGTTCCGCGATGCACGTTTGA
ACCCTTACGTCAACTCTTGCAAGACGTGTCCCGCTTGAATGGCACAGTAT
CCCTGCCCACGGCTTGAACTCTCGTGTGAAGAATATCCCCACGCCCTACG
TCGAATGGTGTATTCATGCCGTCTACACAATCTCTGGCATTGGCAAATGT
TATTGCGGCGGTTAGTCGGGGAGAAATGCGGACTGGTCCGTTGGTGTCTC
GATTGGTGCATGTTCTCAACGGAAACGAACTGCTGATGGTTGTAGCATCC
GTAGCTACGGAGATACGGTTAACCCGATGCAAAGAGAGTGATACGCTGTT
GTGGCGTTTGTGATTTAGGGACCCGTACCAACGAAGTTGGCTGATACAGG
CAGCTATGGATGACATACCAGCGTAGAAAAGTGTACGCAGTACATGCTGC
GGGTCCTACGCCAGGCTCCACCGCTTGGCTCTGAATATACCATGTCTCCA
AACAACCTCTCCTCCACCCGTTTAACCAAATATTTCACATTGCTGTGGAC
TGGCATGAGGAGAGGAAGAGAGCGCCGTTCGGCTTGGCCCCGTGAGAATC
AGACGACCACGGTTGCAACTATATTGTAGCGTGGGGGAGGTGAACTTCCT
TCCGTGCGCAGAGCCTCACCTATTTTCATGAGGGATGGCTTCAACGTTCA
TCCGTACTTCAACTCCCCCAAGCCGTGAATCTAGCCGTCGTCGTCCGACT
CTTGCGGGGCCCGTGCTCTGGGGCCAAACTGTTGCTCGTTCTTCTTCCCC
CCCCCCATTTGCTTCAGGTTTTCGTGGTTTCTGTATCTCTATGACCTCGC
CTCTCTAGATGAAGAGCCCCGATCCCGAACATAGCGCTCACAGCAACTGC
ATGAGCCGTACAGTAGGTTTTCTACTATTACATGTTGCTCAGTTCAGCTT
CAGGTCACATGTTGGGCAAGTGAGTGGGGCATTCAAGAGGTGGGGAACTC
CGTTCGTTCCAATGGGTATTTCGTCGTTGTCAAGGAAGCGCTTCTCCGAG
AGCATGCAGCTACATGCACTAGAGAAGCATGAGACGTGACATCTTGCATC
CCGCTACCTACTTCATACTCGTTTTACCCCACACTACCGAAAGGTTCAGT
TCGGCAAGGTACGGGAACGTTTGCCCAACCAAGGGTATGGGAAATATCAT
CGAATCGGAAATGAAGCAGGGAAGATCAAAGAGTAGTCTGACAACGGGCT
TCGCGAGAACGTCAACGCGAAATATCAGGAGCGGGTAAGGATCAGGCCCG
TGGTGAATCTTAATCTTGCACCGTCCAACCCGCATTTTTGATGGCGCGCA
TTCTCCGACCTTCCCCTCCACACCCCCCACGCTCGATTTCTTGCACATGC
CGGTACAAGAATGACCACGACTACGAGTGGCTGTGCGCCCAGGTAGGTGA
CATATGGGTCTGGATAGACTGCCTCATGCCTGGTACATACAGTTTGGCGA
GGGAACCAAATGGCAATTCTTTGGCGGCCGTCGAGGTTGGCATCGTTCTC
ACTTCATGCAAAGTTTGGCGCCAACAAGATGCATTGTTCTGGCATTGGAG
ATATCTGTTCATCGTGAATGACCCATTCCGTATCTGCCCTGTATGCTTGT
GCCCCTTGCTTGTGCAATGACGACTGGACTCGAAGCTCGACACCCCGTGC
TGGCGGGCGTCCACGTTAGCGGATTTCACGACCGATGGCCGCTTGCCGGA
AGTAAGTTTGGGCATGGGAGCAAAGAACCAGACGACTTGCGGATGTTGTT
CAGCCCCATTCGCGCTGTTTCGTGTTGCCCAGATCGACTACCGCGGATGC
TTTGTTTTGTGGTCAGATTGCGGCCGAACAGAGCCTTTTATCCTCTCCAT
ATCCTACAGACTAACGAGGCCCTTTTACCCCCCGCCGGACCTTTGCCCAC
TGCGCTTTATCATCGAAAAGTGGGGAGTCTCCGAGGCGACGTGA

Coding sequence (CDS) from alignment at chr_00:10982644..10996587+

>Ec-00_006930.1 ID=Ec-00_006930.1|Name=Ec-00_006930.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=699bp|location=Sequence derived from alignment at chr_00:10982644..10996587+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCGGCAGATGAAGGGTGCGGCGACAAAGACACCGCGAGTTTCTCAGGA
GCTGGAGGACGTCATGCAAGCCATCCGAGAACTCAACATCGACAGAGGGT
CCGACCTATGGGAAACATTCAGGGACATCTCCAAACAAGAAACGAGATCC
TTGGGCCCGAAGGGCTACAAGATTTCTGCCATTTCCGGGGCAGAGCTTGG
AGTTCTTCCGGCCAGCGCCAAGAAGGCGCACGATGTTCAAGCCGACGTGT
GGCTAGTCGGCAGCCGCCAAGAGGCGGCCAACGGATTCGAAGGCGTCGAC
GACGCCACAAAGAAGCTGACGACAGCGACCCAAGGCAACGACAACTCATC
TGCGAAAATCGCTGAGGAGGCAGATTTGGCGGGAGTGGTGAAGAGGTTGA
CCAACCTCTCCTTCGAGGAGACAGAAAAGGGAAGCCAGCGTGAAGACGCC
AGCGATGACGAGGATGCCGCCCTCACGGTAGCGGAAGTTGCCCAAGCAGC
CGCCGCCCTGGCAGACGCGGTAGCTGCCGCCGTCGCCGAGGCCGGTACCG
GCAGCGGTTCCCCTGCGGTCTGCCAGAATGACCACGACTACGAGTGGCTG
TGCGCCCAGCTCGACACCCCGTGCTGGCGGGCGTCCACGTTAGCGGATTT
CACGACCGATGGCCGCTTGCCGGAATGGGGAGTCTCCGAGGCGACGTGA

Synonyms

The feature 'Ec-00_006930.1' has the following synonyms


Synonym
Esi0526_0001
Esi_0526_0001