Ec-00_000410.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_000410.1
Unique NameEc-00_000410.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length221
Homology
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BLAST of Ec-00_000410.1 vs. uniprot
Match: D7FHU3_ECTSI (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU3_ECTSI)

HSP 1 Score: 406 bits (1043), Expect = 1.060e-142
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1 
Query:    1 MQAAAVAASPSPMEEEKKXXXXXGXXXGEMKVLEVKVEQGSEDKGKEAETAAETAALKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKNIVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAAMTEEAGKERIARTVQTKGYPKESSIKIEDVEKLFSDAGKANYVKICKAGGNKLRTSTNHLCCTWIRGQRERCGGNERGRT 660
            MQAAAVAASPSPMEEEKKXXXXXGXXXGEMKVLEVKVEQGSEDKGKEAETAAETAALKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKNIVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAAMTEEAGKERIARTVQTKGYPKESSIKIEDVEKLFSDAGKANYVKICKAGGNKLRTSTNHLCCTWIRGQRERCGGNERGRT
Sbjct:    1 MQAAAVAASPSPMEEEKKXXXXXGXXXGEMKVLEVKVEQGSEDKGKEAETAAETAALKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKNIVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAAMTEEAGKERIARTVQTKGYPKESSIKIEDVEKLFSDAGKANYVKICKAGGNKLRTSTNHLCCTWIRGQRERCGGNERGRT 220
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BLAST of Ec-00_000410.1 vs. uniprot
Match: A0A6H5JNF3_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF3_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.120e-32
Identity = 67/85 (78.82%), Postives = 70/85 (82.35%), Query Frame = 1 
Query:  154 AETAALKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKNIVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIG 408
            AETAALKMLEFYFGDSNFGWDRFMQNKAGKMGE LMDISVLMTFNKLKNIVKKADLSPEE QAL++ +  A     VS    Q G
Sbjct:  225 AETAALKMLEFYFGDSNFGWDRFMQNKAGKMGEKLMDISVLMTFNKLKNIVKKADLSPEEAQALVSYVQTAPLHQEVSSSFGQAG 309
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BLAST of Ec-00_000410.1 vs. uniprot
Match: A0A6J1BRF4_MOMCH (la protein 1 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1BRF4_MOMCH)

HSP 1 Score: 75.9 bits (185), Expect = 2.130e-12
Identity = 43/135 (31.85%), Postives = 78/135 (57.78%), Query Frame = 1 
Query:  169 LKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKNIVKKADLSP----EEGQALIARMGEASPSLRVSEDKKQIGRAAAMT--EEAGKERIARTVQTKGYPKESSIKIEDVEKLFSDAGKANYVKI 555
            L+ +EFYF DSN   D F++    +  + ++++S++ +F +++N +K  D+ P    E+    +A    +SP+++VSED K+IGR   ++  EE  ++   RT+     P E ++K+EDVE  F    K N V++
Sbjct:   15 LRQVEFYFSDSNLPRDGFLKTTVNESPDGMVNLSLICSFTRMRNHLKLGDVGPDDISEDTVKAVAETLRSSPTIKVSEDGKKIGRTTELSKPEELIEQLDVRTIAAS--PFEYNVKLEDVEAFFGQVAKVNSVRL 147
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BLAST of Ec-00_000410.1 vs. uniprot
Match: A0A4S8JI98_MUSBA (Uncharacterized protein n=2 Tax=Musa TaxID=4640 RepID=A0A4S8JI98_MUSBA)

HSP 1 Score: 72.8 bits (177), Expect = 2.410e-11
Identity = 51/154 (33.12%), Postives = 81/154 (52.60%), Query Frame = 1 
Query:  169 LKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKN-----IVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAAMT--EEAGKERIARTVQTKGYPKESSIKIEDVEKLFSDAGKANYVKICKAGGNKLRTSTNHLCCT 609
            L+ +EFYF DSN   D F++       + L+ +++L +F ++KN        K +  PEE    +A +  +SPSLRVSED K++GR+  M   EE  ++  +RT+     P +  +K E VE  F+  GK N V++ +   +K      H C T
Sbjct:   15 LRQVEFYFSDSNLPRDNFLKKTVQDSEDGLVSLALLCSFTRMKNHLGLSAAMKPEEIPEETVLSVADVLRSSPSLRVSEDGKRVGRSTEMMKPEEVIEQVDSRTIAVTPLPYD--VKSEVVESFFALHGKVNSVRLPRHVSDK-----RHFCGT 161
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BLAST of Ec-00_000410.1 vs. uniprot
Match: A0A482RX93_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX93_9ARCH)

HSP 1 Score: 69.7 bits (169), Expect = 1.990e-10
Identity = 46/132 (34.85%), Postives = 75/132 (56.82%), Query Frame = 1 
Query:  163 AALKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKNIVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAAMTEEAGKERIARTVQTKGYPKESS-IKIEDVEKLFSDAGKANYVKI 555
            A  K +EFYF DSN+  D F++  A    +  + ISVL+TFN+LKN+            A +A+  E+S ++ +S +K ++ RA  + E    E  +RT+  KGYP +++ + IE + + +S  GK  YVK+
Sbjct:    7 AIRKQVEFYFSDSNYRKDTFLKAAAESDPDGFVAISVLLTFNRLKNLTTDV--------AEVAKAVESSDAVVLSANKDKVKRAEPLPETD--ESASRTLYIKGYPVDNADVTIESIAEQWSPYGKVLYVKM 128
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BLAST of Ec-00_000410.1 vs. uniprot
Match: A0A7S0SSA1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SSA1_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.860e-10
Identity = 46/145 (31.72%), Postives = 77/145 (53.10%), Query Frame = 1 
Query:  157 ETAALKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKNIVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAAMTEEAGKERIARTVQTKGYPKESSI-KIEDVEKLFSDAGKANYVKICKAGGNKLRTS 588
            E+A  K +EFYF DSNF  D F++  A    E  + ISV++TFNKL+N+           +A +A   E S  + + +DK ++ R+  + E+   +   +T+  KG+P E  I  I+++ +LFS  G    V++ +    K + S
Sbjct:    4 ESAIKKQVEFYFSDSNFRKDTFLKAAADSDPEGFVPISVVLTFNKLRNLTTD--------EAAVANAIENSNVVTLDDDKTRVRRSNPLPEDDTSK--PKTLYVKGFPVEEPIVTIDEITELFSVYGDIAIVRLRRDETKKFKGS 138
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BLAST of Ec-00_000410.1 vs. uniprot
Match: A0A7S3PPI0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PPI0_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.140e-9
Identity = 43/157 (27.39%), Postives = 86/157 (54.78%), Query Frame = 1 
Query:  139 EAETAAETAALKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKNI------VKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAAMTEEAGKERI--ARTVQTKGYPKESSIKIEDVEKLFS---DAGKANYVKICKAGGNK 576
            +A+  + ++  K LEFYF + N   DRF++ +     ++++DI +L+TFN++K+       V K  L+  E ++++A   +AS  ++V+ED+ ++GR   +  +  +      RT+  +G+P +   K E+V K      D  K +Y+K+ +   N+
Sbjct:   88 DAKKVSMSSIRKQLEFYFSEGNLRRDRFLRERLEAAKDDMVDIDILLTFNRIKDYLGLPKNVPKTSLTTAENRSILADAVKASDVVKVNEDRFRMGRKRRVDMKYERHDFDPKRTIVVEGFPLDC--KFEEVRKAIISVYDESKIDYIKLRRVPENE 242
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BLAST of Ec-00_000410.1 vs. uniprot
Match: A0A152AA29_9MYCE (Lupus La protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152AA29_9MYCE)

HSP 1 Score: 66.2 bits (160), Expect = 3.500e-9
Identity = 48/156 (30.77%), Postives = 79/156 (50.64%), Query Frame = 1 
Query:  139 EAETAAETAALKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKNIVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAAMTEEAGKERIARTVQTKGYPKESSIKIEDVEKLFSDAGKANYVKICKAGGNKLRTSTNHLCC 606
            E +TA     LK +E+YF DSN+  D+F+  +A K  +  + I V+ +F ++K +         E   LI+   + S  L VSED K + R   + E  G E+   ++ +KG+P +++  IE VE+ F   GK   V+  K   N+ +T    + C
Sbjct:   10 EVDTATINKILKQVEYYFSDSNYPRDKFLNVEAAKHPDQYIGIDVIASFKRMKEL--------SEDLQLISDTLKKSDKLVVSEDGKMVKRVYPIPESIGSEK---SLYSKGWPLDTTT-IEKVEEFFKPYGKVLSVRFRK---NRDKTFKGSMVC 150
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BLAST of Ec-00_000410.1 vs. uniprot
Match: A0A1X7UCM2_AMPQE (Uncharacterized protein n=3 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UCM2_AMPQE)

HSP 1 Score: 62.0 bits (149), Expect = 1.100e-7
Identity = 43/143 (30.07%), Postives = 76/143 (53.15%), Query Frame = 1 
Query:  157 ETAALKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKNIVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAA--------MTEEAGKERIARTVQTKGYPKESSIKIEDVEKLFSDAGKANYVKICK 561
            E   ++ +EFYFGD N   D+F+QNK  +  +  +++SVL+TF++LK +    D S   G    A     S  L VSED  ++ R ++        ++ E  K+   RT+  KG+PK+S++  +D++      G+   +++ K
Sbjct:   23 EKKIIRQIEFYFGDRNLSRDKFLQNKIKENEDGWVELSVLLTFSRLKAL--STDCSLIAG----ALRKSTSGLLEVSEDGLKVKRKSSDPVPTLSLLSPEDRKDMSNRTLYMKGFPKDSTL--DDIQDFLLPFGETEMIRMKK 157
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BLAST of Ec-00_000410.1 vs. uniprot
Match: A0A024TPS9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TPS9_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 7.370e-7
Identity = 51/143 (35.66%), Postives = 72/143 (50.35%), Query Frame = 1 
Query:  154 AETAAL-KMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKNIVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAAMT---EEAGKERIARTVQTKGYPKESSIKIEDVEKLFSDAGKANYVKICKAGG 570
            A+ AA+ K +EFYF DSNF  D+F+Q +  K  +  +  SVL TF KL+ +   A        A++A   E S  + ++ED+  + R  A T   E+A K    RTV   G        I+ V + F DA K  Y +I KA G
Sbjct:    2 ADVAAIQKQVEFYFSDSNFRRDKFLQAETAKNADRFVPFSVLFTFKKLQALTTDA--------AVLASALEKSTVVEMNEDRTALRRIHAATLSDEDASK----RTVAFSGLGVLPPT-IDQVNEAF-DADKVAYTRIVKAAG 130
The following BLAST results are available for this feature:
BLAST of Ec-00_000410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHU3_ECTSI1.060e-142100.00HTH La-type RNA-binding domain-containing protein ... [more]
A0A6H5JNF3_9PHAE1.120e-3278.82HTH La-type RNA-binding domain-containing protein ... [more]
A0A6J1BRF4_MOMCH2.130e-1231.85la protein 1 n=1 Tax=Momordica charantia TaxID=367... [more]
A0A4S8JI98_MUSBA2.410e-1133.12Uncharacterized protein n=2 Tax=Musa TaxID=4640 Re... [more]
A0A482RX93_9ARCH1.990e-1034.85Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A7S0SSA1_9STRA3.860e-1031.72Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S3PPI0_9STRA3.140e-927.39Hypothetical protein (Fragment) n=1 Tax=Aplanochyt... [more]
A0A152AA29_9MYCE3.500e-930.77Lupus La protein n=1 Tax=Tieghemostelium lacteum T... [more]
A0A1X7UCM2_AMPQE1.100e-730.07Uncharacterized protein n=3 Tax=Amphimedon queensl... [more]
A0A024TPS9_9STRA7.370e-735.66Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:629030..633122 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score409.5
Seed ortholog evalue1e-111
Seed eggNOG ortholog2880.D7FHU3
Length663
KEGG koko:K11090,ko:K14837,ko:K15191
KEGG Pathwayko05322,map05322
Hectar predicted targeting categoryother localisation
Gene idEc-00_000410.1
GOsGO:0000049,GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003727,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006139,GO:0006351,GO:0006353,GO:0006383,GO:0006386,GO:0006396,GO:0006399,GO:0006403,GO:0006405,GO:0006409,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008033,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015031,GO:0015833,GO:0015931,GO:0016070,GO:0018130,GO:0019438,GO:0031123,GO:0031503,GO:0031974,GO:0031981,GO:0032774,GO:0033036,GO:0033592,GO:0034337,GO:0034414,GO:0034470,GO:0034471,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042779,GO:0042780,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0046483,GO:0046907,GO:0050657,GO:0050658,GO:0051031,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0061818,GO:0070013,GO:0070727,GO:0071166,GO:0071426,GO:0071431,GO:0071702,GO:0071704,GO:0071705,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097064,GO:0097159,GO:0097617,GO:0097659,GO:0099116,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1905267
EggNOG free text desc.RNA binding
EggNOG OGsKOG0118@1,KOG0118@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko03021
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_000410Ec-00_000410Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 629030..633122 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000410.1Ec-00_000410.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 629030..633122 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000410.1.1Ec-00_000410.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 629030..629263 +
Ec-00_000410.1.2Ec-00_000410.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 630255..630365 +
Ec-00_000410.1.3Ec-00_000410.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 631693..631812 +
Ec-00_000410.1.4Ec-00_000410.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 632331..632445 +
Ec-00_000410.1.5Ec-00_000410.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 633040..633122 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000410.1CDS:Ec-00_000410.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 629030..629263 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_000410.1 ID=Ec-00_000410.1|Name=Ec-00_000410.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=221bp
MQAAAVAASPSPMEEEKKEEEEKGEEKGEMKVLEVKVEQGSEDKGKEAET
AAETAALKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKN
IVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAAMTEEAGKERI
ARTVQTKGYPKESSIKIEDVEKLFSDAGKANYVKICKAGGNKLRTSTNHL
CCTWIRGQRERCGGNERGRT*
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spliced messenger RNA

>Ec-00_000410.1 ID=Ec-00_000410.1|Name=Ec-00_000410.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=663bp|location=Sequence derived from alignment at chr_00:629030..633122+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGGCCGCTGCAGTAGCGGCGTCCCCTTCGCCGATGGAAGAGGAGAA
GAAGGAGGAGGAGGAGAAAGGAGAGGAGAAAGGAGAGATGAAGGTATTGG
AGGTGAAGGTGGAGCAAGGGTCGGAAGACAAGGGTAAGGAGGCTGAAACC
GCCGCTGAAACCGCCGCCCTCAAGATGCTCGAGTTTTACTTCGGGGACTC
CAACTTCGGGTGGGACCGCTTCATGCAGAACAAGGCGGGCAAGATGGGCG
AGAACTTGATGGACATTTCTGTCCTCATGACGTTTAACAAGCTCAAGAAC
ATCGTGAAGAAGGCCGACCTTTCCCCGGAGGAGGGCCAAGCCTTGATTGC
GAGGATGGGCGAGGCGTCGCCGTCTCTTCGCGTGAGCGAGGACAAGAAGC
AGATCGGGCGTGCTGCGGCCATGACGGAGGAGGCCGGGAAGGAGCGCATC
GCCCGCACCGTGCAGACCAAGGGATATCCCAAGGAGTCGTCGATCAAGAT
CGAGGATGTGGAGAAACTCTTCTCCGACGCTGGGAAGGCCAACTACGTCA
AGATCTGCAAGGCCGGAGGCAACAAGCTCAGGACCAGCACTAATCACCTC
TGCTGTACTTGGATTCGAGGCCAGAGAGAAAGATGTGGCGGAAACGAAAG
GGGACGCACGTGA
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protein sequence of Ec-00_000410.1

>Ec-00_000410.1 ID=Ec-00_000410.1|Name=Ec-00_000410.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=221bp
MQAAAVAASPSPMEEEKKEEEEKGEEKGEMKVLEVKVEQGSEDKGKEAET
AAETAALKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKN
IVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAAMTEEAGKERI
ARTVQTKGYPKESSIKIEDVEKLFSDAGKANYVKICKAGGNKLRTSTNHL
CCTWIRGQRERCGGNERGRT*
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mRNA from alignment at chr_00:629030..633122+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_000410.1 ID=Ec-00_000410.1|Name=Ec-00_000410.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4093bp|location=Sequence derived from alignment at chr_00:629030..633122+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCAGGCCGCTGCAGTAGCGGCGTCCCCTTCGCCGATGGAAGAGGAGAA
GAAGGAGGAGGAGGAGAAAGGAGAGGAGAAAGGAGAGATGAAGGTATTGG
AGGTGAAGGTGGAGCAAGGGTCGGAAGACAAGGGTAAGGAGGCTGAAACC
GCCGCTGAAACCGCCGCCCTCAAGATGCTCGAGTTTTACTTCGGGGACTC
CAACTTCGGGTGGGACCGCTTCATGCAGAACAAGGTGCGGTAACGGTAGT
ATACGGTTCGCCATACATGTATGGGGTGTACGCTTGGCGGCAGGTAGATA
CTTGTAGCATTTGCTGTACGCCTGACTGCGGGGAGCAATCGATTTGTTCT
TTGTGGGTGTGGCAATTGCTGTCCGCCTGACTTCAGGGAGCAATCGATTT
GCTCTTTGTCGGGTGTGGCAGTTGCTGTCCGCCTGACTGCAGGAAGTAAT
CAACTTGCTATACATGGGGTGTGGTAATTGCTGTGCGCCTGACTGCAGGG
AGTAGTCGATTTGCTTTTCGTTGGGTGTGGCAATTGCTGTACGCCTGACT
GCAGGGAGTAATCGATTCGCTCTTTGTGGGGTGTGGTAATTGCTGTATGC
CTGACTGCAGTTCAGCTCTAGGCACTCCTCTGCGATGGTGTTGTGGTTTT
CGGCGTTGTTGTCGTTTAGGCTCTCAGGGGTGTCCCGAACGCGATTTGAC
TTTTGATCCTTATCTCTCTTCGGTCTTAAGTTCATTGATTTCTTATTCGC
AAGTGCTCTTGTGGAAAGCAACATGTTTCATGTGCGGGAGGGAAATAGAC
TGCCTACAGCAGAGGGTGTTGCGGGACAATAAAGAGTGGTTTATGCTTTT
CACGGTGTTGCGGGACAATAAAGAGTGGTTTATGCTTTTCACGGTCTTGC
GGGACAATAAAGAGTGGTTTATGCTTTTCACGGGTGGATGCTTGACTTGT
TAACATAGGTGGCAATACAACACTCCGTTTTATTTGGGCGGGTGTTTGCT
TCTGCTGTAGTATTTGCTTCTGCTGTAGTATTTGCTTCTGCTGTAGTATT
TGCTACTGCTGTAGTTGAGTGCGTAGTATTCCCTCTTTGACGTCGTTGCT
TCCAATTGGACTGGAGAGTATGTTCCCAGAACATGCTTGAATCGAGTGTT
GACTTCTGTTAAACTGATGTTTTTTTCTGTGTGTTTTCCTGCTGCGTTTT
TGTCCTGCTTTTGTTTTCGATGCAGGCGGGCAAGATGGGCGAGAACTTGA
TGGACATTTCTGTCCTCATGACGTTTAACAAGCTCAAGAACATCGTGAAG
AAGGCCGACCTTTCCCCGGAGGAGGGCCAAGCCTTGGTGAGCTACGTACA
GATAGCGCCCGTACTTCAGAACCATCCTCTAGTTTTGGCCAGGCTGGGGT
TCTGAGTTCCTCTTGTAGGCTACAAATGGCCGGCCGCTACATAGAAGTAC
CAGGTTTTTGTGCTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCAAACGGTGCTCAAGCTCTTAGATTCTGATTGT
TTTGAGGCTATATCAATTTCTTTAACTGCTAAGCTCCTAAGCGCGGGCGC
TTTCTGCACTGCTGTGGACGTATTCATCATGGGGGGTTGTGTTACGGATG
GCCACCATATAGGTTGTAGCGTAGTGGTTCTTAGACGGGCTCACAAATGT
TCCTCAAGGTCCTCAAAGTCTCAGACTTTGAGTTTCTTCAGGCAGTATCA
ATTTCTTGACTGCCAAGTTGCTAAGCGCGGGCGCGATCTTTCTAGTTGTA
ATCGTCACGAGACAGGCAGACACACCGGTGTTTGCCAGAGATAAAAGTCT
TCAGGCTCTCTCCTCGCCAGTGTCTTTCCCAATAACACTGAAAGAATAAA
ATAGGGTGTGCCGAAAAAATGTACAAAAATCCCTTTTCAGCGCCGCTAGT
TTATTCCCCAACAATGAAAGAATGTTGCGCAGTCGTACTAGCAATGCAGC
GCTGGCGGCCCTGTTTATGGGACAGACATTTTGAAGTTGTGACGAGAGGT
GCTCTATGTTTTACCGTAGGTGACATTACGTGAGATATCACACCCCCTAG
ACGGATTTCGAAAGCCCGATTTCTCCGCAGCAGAGAGAGCGGCGGTACCA
AAAACAGCGGCGTTGGAGCCGTCTGTGTCGTCGATTCGAGAGATAGCTTT
CCGAAAACGCAATTTTGTTTCGTTTACACGTATGCATCCTCTTGGTAGTG
GAGTACGTAGTCGAGCTTTGACACCGGTACTGTATGTATGTCTCCGTCTC
CCCACGCAGGGGCCATCCACCACCCTGTGCCTTCTCTTGCAATAATCAAG
TTCCATTTCTATCCGCGTACCCCCCCCACCCCCCCCCAAGTTGCCTCGAC
TCCTATCTTGGTCTCATATCACGTCAAACTGTTGCTTTCCCCACTGCACT
GCAAGCACAAGACACCCCCAAGATTGTGCGGGACCCCCCCCCCACCCGGC
CTTCACATGCGCGTACCCCCCGACTCGACTGTTGTCCTGTGGTCTCTTTA
ACTCTCGCTTCCCCGCTGCACTGCAAACACACGAAACGAAACGCAACGAA
ACGACGTACCAAGATTGCGAGGATGGGCGAGGCGTCGCCGTCTCTTCGCG
TGAGCGAGGACAAGAAGCAGATCGGGCGTGCTGCGGCCATGACGGAGGAG
GCCGGGAAGGAGCGCATCGCCCGCACCGTGCAGGTGCTGTTGCTGTTACT
GTAACTCTGTATAGGCTGGGGTTGGGAATGCAGCCTTCAAGCTAGCGACA
CACGGCAAATAGTGGAATCAGAAGAGTAGACGTTGGTACTTCCTGTGTTG
TATTCATGAATTGCCGTCGGTTCGTTTTCCAAGCGTCGCTGAAAAGCTCC
AAGACTGCTTCAGCGTCCGCGATCGGAGACGTGGAAGGAGCAGCCTACAC
GGCTACCGACGCGCGGTTGTCATTATTTTTTCTTCATACTAATAGTAGTG
TGCCTTTTCGTGGCACCGTTTATTCTGGGTGCCAGCCCATGATATGTAAT
TGATTGTCACCAACCGGGGTCACGCCCAGGAGGAACGTTTGAGGAACGTA
TGTAGCGCGGGCGTTTTTTTTTTTTTCCGGCTGTATCGACTATCATTCAG
ACCCCTTGCCAGTTAGCCGTCCCGTCAACAAATGCCGTATTCAACAACAT
AATCATTTTTGTGTCTCTTTCGCGCTGCTGCTGATGCTGATGCTGCCGCA
GACCAAGGGATATCCCAAGGAGTCGTCGATCAAGATCGAGGATGTGGAGA
AACTCTTCTCCGACGCTGGGAAGGCCAACTACGTCAAGATCTGCAAGGCC
GGAGGCAACAAGCTCAGTAAGTCGCTTGGTTCACTTACTACATGACTCTG
TGTGCTTTTTTGTTCGGTAGCGATGTTGACGGCTTTGTTGTCAAGGTTGG
TATTCATGTTGTAGGTGGTGGTGTTGTTGTCGTTGATTTGACAGTCGTTG
TGATTATTCATGACGGTGGCGTTTTGTTGTGGTTGATGTCGCTGTTATCG
TCGTTGGGGCTATGGTCGTTTCTCTTGTTGCCGCTCCACATTCAAGAACC
GTTGGCCAAAACATTCACCCTCCCCTTTTGGTACTGCAAGGCACAGACAA
CAATTATTTCGAGCACAGTCTTCAGGCCAGTCCTCGGCTACATTTACACT
CGCACATGGAACCAGCATGGCACCCAGTGGCCGGCCAGTATTTGAACCGA
ACCGTTCTGGAATATTGCAGCAGGCCGGACGAAATTCCCGCACTCTGGTA
ATCTCTCAGGTCTTTCCAACGCACCAGCAGCGACAAGGACCAAATATTAT
TGTGCCATGCGGTGTTTTCGGCGGACACACTGACTGATATTCCAAGTCAT
TCTCAATACTTTGAATGGTGCTGGTGAAGAATTTTGTTGGCACATACCGG
CCCTAAACAGGGACCAGCACTAATCACCTCTGCTGTACTTGGATTCGAGG
CCAGAGAGAAAGATGTGGCGGAAACGAAAGGGGACGCACGTGA
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Coding sequence (CDS) from alignment at chr_00:629030..633122+

>Ec-00_000410.1 ID=Ec-00_000410.1|Name=Ec-00_000410.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=663bp|location=Sequence derived from alignment at chr_00:629030..633122+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCAGGCCGCTGCAGTAGCGGCGTCCCCTTCGCCGATGGAAGAGGAGAA
GAAGGAGGAGGAGGAGAAAGGAGAGGAGAAAGGAGAGATGAAGGTATTGG
AGGTGAAGGTGGAGCAAGGGTCGGAAGACAAGGGTAAGGAGGCTGAAACC
GCCGCTGAAACCGCCGCCCTCAAGATGCTCGAGTTTTACTTCGGGGACTC
CAACTTCGGGTGGGACCGCTTCATGCAGAACAAGGCGGGCAAGATGGGCG
AGAACTTGATGGACATTTCTGTCCTCATGACGTTTAACAAGCTCAAGAAC
ATCGTGAAGAAGGCCGACCTTTCCCCGGAGGAGGGCCAAGCCTTGATTGC
GAGGATGGGCGAGGCGTCGCCGTCTCTTCGCGTGAGCGAGGACAAGAAGC
AGATCGGGCGTGCTGCGGCCATGACGGAGGAGGCCGGGAAGGAGCGCATC
GCCCGCACCGTGCAGACCAAGGGATATCCCAAGGAGTCGTCGATCAAGAT
CGAGGATGTGGAGAAACTCTTCTCCGACGCTGGGAAGGCCAACTACGTCA
AGATCTGCAAGGCCGGAGGCAACAAGCTCAGGACCAGCACTAATCACCTC
TGCTGTACTTGGATTCGAGGCCAGAGAGAAAGATGTGGCGGAAACGAAAG
GGGACGCACGTGA
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Synonyms
The feature 'Ec-00_000410.1' has the following synonyms
Synonym
Esi1101_0002
Esi_1101_0002