Ec-28_003820.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_003820.1
Unique NameEc-28_003820.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length71
Homology
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BLAST of Ec-28_003820.1 vs. uniprot
Match: D7G060_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G060_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 2.040e-10
Identity = 29/37 (78.38%), Postives = 30/37 (81.08%), Query Frame = 0 
Query:    1 MMVDDGTTINGIMIDAPEQDNSGDPAGVLSHMHTLRC 37
            MMVDDGTTINGIMIDAPEQDNSGDPAG  +  H   C
Sbjct:    1 MMVDDGTTINGIMIDAPEQDNSGDPAGFPATWHGPPC 37
[Close]
BLAST of Ec-28_003820.1 vs. uniprot
Match: D8LTK1_ECTSI (Metacapase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK1_ECTSI)

HSP 1 Score: 48.5 bits (114), Expect = 8.920e-5
Identity = 22/26 (84.62%), Postives = 22/26 (84.62%), Query Frame = 0 
Query:    2 MVDDGTTINGIMIDAPEQDNSGDPAG 27
            M DDGTTING MID PEQDNSGDP G
Sbjct:    1 MEDDGTTINGTMIDGPEQDNSGDPPG 26
The following BLAST results are available for this feature:
BLAST of Ec-28_003820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G060_ECTSI2.040e-1078.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LTK1_ECTSI8.920e-584.62Metacapase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:3691745..3692429 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003820.1Ec-28_003820.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 3691745..3692429 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_003820.1 ID=Ec-28_003820.1|Name=Ec-28_003820.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=71bp
MMVDDGTTINGIMIDAPEQDNSGDPAGVLSHMHTLRCRTPSLSMRVLASH
LEILVLAKVSGDLAWASLLC*
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