Ec-28_003550.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_003550.1
Unique NameEc-28_003550.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length375
Homology
BLAST of Ec-28_003550.1 vs. uniprot
Match: D8LTM3_ECTSI (RING-type E3 ubiquitin transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM3_ECTSI)

HSP 1 Score: 676 bits (1745), Expect = 1.540e-244
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0
Query:    1 MGHRLAAHPGVQNAILDDLVEQGRRVPSGRRGIHPNLQGPPGNERGLARLVDMLDPEEESSHRSTRTSRSGRGRSSGHLMLQRDRRGMFDYDDEPPLPHLHLDPRVSAELEGVYAEVQADGWQPWREEEKLDGSESGLSSSRLSDGRLGCSCKKCHASSGLSLGTEEEEAQEGTCWKDVLAEFECDICFDVLVGVHVLDNCGHTFCGACMERWIDNAPQGECPVCRTPVDKLVPVRKMDEMIAKAVEAAAPSRERDAWYERKAHWEGTARRRQXXXXXXXXXXXXXTPSHSVVHAQGAAAGIFGRTGVATWFGATDAREAGGRRNRXXXXXXXXXXXXXXXXXXXXGFRLDKMQTVLAVAVMLVMAVIKMRGLR 374
            MGHRLAAHPGVQNAILDDLVEQGRRVPSGRRGIHPNLQGPPGNERGLARLVDMLDPEEESSHRSTRTSRSGRGRSSGHLMLQRDRRGMFDYDDEPPLPHLHLDPRVSAELEGVYAEVQADGWQPWREEEKLDGSESGLSSSRLSDGRLGCSCKKCHASSGLSLGTEEEEAQEGTCWKDVLAEFECDICFDVLVGVHVLDNCGHTFCGACMERWIDNAPQGECPVCRTPVDKLVPVRKMDEMIAKAVEAAAPSRERDAWYERKAHWEGTARRRQXXXXXXXXXXXXXTPSHSVVHAQGAAAGIFGRTGVATWFGATDAREAGGRRNRXXXXXXXXXXXXXXXXXXXXGFRLDKMQTVLAVAVMLVMAVIKMRGLR
Sbjct:    1 MGHRLAAHPGVQNAILDDLVEQGRRVPSGRRGIHPNLQGPPGNERGLARLVDMLDPEEESSHRSTRTSRSGRGRSSGHLMLQRDRRGMFDYDDEPPLPHLHLDPRVSAELEGVYAEVQADGWQPWREEEKLDGSESGLSSSRLSDGRLGCSCKKCHASSGLSLGTEEEEAQEGTCWKDVLAEFECDICFDVLVGVHVLDNCGHTFCGACMERWIDNAPQGECPVCRTPVDKLVPVRKMDEMIAKAVEAAAPSRERDAWYERKAHWEGTARRRQXXXXXXXXXXXXXTPSHSVVHAQGAAAGIFGRTGVATWFGATDAREAGGRRNRXXXXXXXXXXXXXXXXXXXXGFRLDKMQTVLAVAVMLVMAVIKMRGLR 374          
BLAST of Ec-28_003550.1 vs. uniprot
Match: A0A4S8MSH8_DENBC (RING/U-box n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8MSH8_DENBC)

HSP 1 Score: 70.5 bits (171), Expect = 2.790e-10
Identity = 37/100 (37.00%), Postives = 53/100 (53.00%), Query Frame = 0
Query:  151 SCKKCHASSGLSLGTEEEEAQEGTCWKDVLAEFECDICFDVLVGVHVLDNCGHTFCGACMERWIDNAPQGECPVCRTPV---DKLVPVRKMDEMIAKAVE 247
            S K+  + S      ++ +A++     D+  E  C ICFD+LVG H+L+ CGHT CG C   WI    Q  CPVCRT       L+P   +D ++ K +E
Sbjct:   63 SSKRRRSCSPSVFPNKKAKAKQDELLDDLSDEISCPICFDLLVGAHLLNPCGHTLCGPCSYTWITLKKQTTCPVCRTKCCHYKSLIPNIIVDNIVEKYIE 162          
BLAST of Ec-28_003550.1 vs. uniprot
Match: A0A8H3TX00_9TREE (RING-type domain-containing protein n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3TX00_9TREE)

HSP 1 Score: 65.1 bits (157), Expect = 7.970e-8
Identity = 44/109 (40.37%), Postives = 55/109 (50.46%), Query Frame = 0
Query:  166 EEEEA--QEGTCWKDVLAEFECDICFDVLVGVHVLDNCGHTFCGACMERWIDNAPQGECPVCRTPVDK-----LVPVRKMDEMIAKAVEAAAPSRE-RDAWYERKAHWE 266
            EE+E+  QE      V  E  C IC  +LVG      CGH FC  C   WI +     CP+CR P+ +     LVP+R +D +I K VEA     E RD W ER A W+
Sbjct:  249 EEKESIKQESMNVDAVEEEITCPICMAILVGATAAVPCGHLFCAPCGLSWIRD--HDNCPICRDPLAQPLTIALVPMRVVDALIGKWVEAKGSQWEGRDDWRERCAAWD 355          
BLAST of Ec-28_003550.1 vs. uniprot
Match: A0A167RHP8_CALVF (Kinase-like protein n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167RHP8_CALVF)

HSP 1 Score: 64.7 bits (156), Expect = 1.370e-7
Identity = 34/96 (35.42%), Postives = 52/96 (54.17%), Query Frame = 0
Query:  182 EFECDICFDVLVGVHVLDNCGHTFCGACMERWIDNAPQGECPVCRTPVDKLVPVRK---MDEMIAKAVEAAAPS-----RERDA----WYERKAHW 265
            ++ C ICFD++VG H+ + CGH+ CG+C  +W  N     C  CR P+++  PV     +D +I K +   A +     +ER A    W +RKA W
Sbjct:  612 DYSCPICFDLIVGCHLTNPCGHSACGSCSTKWAANKTVPTCFACRAPMNRTTPVIPGLLVDNVIEKQINLLAENGDEEWQERGAKRKEWDQRKAAW 707          
BLAST of Ec-28_003550.1 vs. uniprot
Match: A0A4D9DAD4_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAD4_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 6.490e-7
Identity = 34/85 (40.00%), Postives = 50/85 (58.82%), Query Frame = 0
Query:  182 EFECDICFDVLVGVHVLDNCG--HTFCGACMERWIDNAPQG--ECPVCRTPVDKLVPVRKMDEMIAKAVEAAAPSRERDAWYERK 262
            + EC IC + +V    +D CG  HTFCG C+ERW++    G   CP C+ PV   +P+R+ D MI K V A+    E+ ++Y R+
Sbjct:  409 DLECVICHEYMVEAAAVD-CGEGHTFCGECIERWLELPVAGGSRCPTCQKPVHSTIPMRQYDAMIEKYVRASNLWDEQCSFYRRR 492          
BLAST of Ec-28_003550.1 vs. uniprot
Match: E3LLZ3_CAERE (RING-type domain-containing protein n=4 Tax=Caenorhabditis TaxID=6237 RepID=E3LLZ3_CAERE)

HSP 1 Score: 55.8 bits (133), Expect = 1.510e-5
Identity = 24/56 (42.86%), Postives = 35/56 (62.50%), Query Frame = 0
Query:  179 VLAEFECDICFDVLVGVH----VLDNCGHTFCGACMERWIDNAPQGECPVCRTPVD 230
            +++  EC ICF           V+D CGHTFC AC+E W++N  +  CP+CRTP++
Sbjct:    1 MVSRLECAICFHYFDDFERLPKVIDECGHTFCYACLENWLNN--EDTCPMCRTPIN 54          
BLAST of Ec-28_003550.1 vs. uniprot
Match: UPI0009E25AFA (LOW QUALITY PROTEIN: uncharacterized protein LOC110018860 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E25AFA)

HSP 1 Score: 57.0 bits (136), Expect = 3.490e-5
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 0
Query:  160 GLSLGTEEEEAQEGTCWKDVLAEFECDICFDVL---VGVHVLDNCGHTFCGACMERWID-NAPQGECPVCRTPVDK--LVPV 235
            G+ +   E   ++G   K  +A FEC+ICFD+    V   V+ +CGH FC +C+ +W+  ++   ECPVC+  V +  +VP+
Sbjct:  280 GVEVLIPESSEEDGEVKKKSVANFECNICFDMAKEPVVTSVVTSCGHLFCWSCLYQWLHVHSDNKECPVCKGEVTEANIVPI 361          
BLAST of Ec-28_003550.1 vs. uniprot
Match: A0A8H6SWW9_9AGAR (RING finger protein 8 n=1 Tax=Mycena indigotica TaxID=2126181 RepID=A0A8H6SWW9_9AGAR)

HSP 1 Score: 55.8 bits (133), Expect = 3.820e-5
Identity = 25/64 (39.06%), Postives = 37/64 (57.81%), Query Frame = 0
Query:  182 EFECDICFDVLVGVHVLDNCGHTFCGACMERWID-NAPQGECPVCRTPVDK--LVPVRKMDEMI 242
            E  C IC D+L   H+L+ CGH+FCG C+  WI     +  CPVCR  + K  + P   +D+++
Sbjct:  137 ELTCAICCDLLAAAHLLNPCGHSFCGECVSEWISVKVRKTTCPVCRAIIAKQPMAPNISLDKLV 200          
The following BLAST results are available for this feature:
BLAST of Ec-28_003550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LTM3_ECTSI1.540e-244100.00RING-type E3 ubiquitin transferase n=2 Tax=Ectocar... [more]
A0A4S8MSH8_DENBC2.790e-1037.00RING/U-box n=1 Tax=Dendrothele bispora (strain CBS... [more]
A0A8H3TX00_9TREE7.970e-840.37RING-type domain-containing protein n=1 Tax=Nagani... [more]
A0A167RHP8_CALVF1.370e-735.42Kinase-like protein n=1 Tax=Calocera viscosa (stra... [more]
A0A4D9DAD4_9STRA6.490e-740.00RING-type domain-containing protein n=2 Tax=Monodo... [more]
E3LLZ3_CAERE1.510e-542.86RING-type domain-containing protein n=4 Tax=Caenor... [more]
UPI0009E25AFA3.490e-535.37LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]
A0A8H6SWW9_9AGAR3.820e-539.06RING finger protein 8 n=1 Tax=Mycena indigotica Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 185..225
e-value: 1.7E-5
score: 34.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 185..226
score: 12.799
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 165..265
e-value: 8.1E-18
score: 66.1
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 185..225
e-value: 1.7E-9
score: 37.4
NoneNo IPR availablePANTHERPTHR16079:SF4E3 UBIQUITIN-PROTEIN LIGASE CHFRcoord: 181..320
NoneNo IPR availablePANTHERPTHR16079UBIQUITIN LIGASE PROTEIN CHFRcoord: 181..320
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 353..370
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 371..374
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..352
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 177..245
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 201..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:3361099..3365335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003550.1Ec-28_003550.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 3361099..3365335 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_003550.1 ID=Ec-28_003550.1|Name=Ec-28_003550.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=375bp
MGHRLAAHPGVQNAILDDLVEQGRRVPSGRRGIHPNLQGPPGNERGLARL
VDMLDPEEESSHRSTRTSRSGRGRSSGHLMLQRDRRGMFDYDDEPPLPHL
HLDPRVSAELEGVYAEVQADGWQPWREEEKLDGSESGLSSSRLSDGRLGC
SCKKCHASSGLSLGTEEEEAQEGTCWKDVLAEFECDICFDVLVGVHVLDN
CGHTFCGACMERWIDNAPQGECPVCRTPVDKLVPVRKMDEMIAKAVEAAA
PSRERDAWYERKAHWEGTARRRQEARAAAAAAAAAATPSHSVVHAQGAAA
GIFGRTGVATWFGATDAREAGGRRNRGRGEEEGRGRRDEDEDDDDDGFRL
DKMQTVLAVAVMLVMAVIKMRGLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR017907Znf_RING_CS