Ec-28_002400.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_002400.1
Unique Name	Ec-28_002400.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	734

Homology

[Close]

BLAST of Ec-28_002400.1 vs. uniprot
Match: D7FXN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN3_ECTSI)

HSP 1 Score: 1134 bits (2932), Expect = 0.000e+0
Identity = 649/691 (93.92%), Postives = 650/691 (94.07%), Query Frame = 0

Query:   44 SLVSSTSSSVASTASRVRKRRPSVLGGGFSTAGSCASSSPKSIQGSWIEDDTDPKAGPCWQQRDAGRVGHPAIRRGSRSDGHDDXXXXXXXXXXXXXXXXXTESTEITVVGWGDRSSRRNSSRRASREETAEWNDGRPRRLSSKGVVLATXXXXXXXXXXXXXXYDGTANETHQVEAGVRNKDKTLGGAATSIGTAIAYVG-GSDDGSGVSISVERATEIATIPTITPPPFQGGQQAAAAAATSIPSVAQPSPAGETPEIGTQSPASQSAGEGASAKSGMTPTRMGLAASAPNLPTLGSMNNESDQHSSRSGSRFPQVLPRQRWCQEGRGASVRHRAGLAVAAGGGLGGCGVLPDGGGQKVFHNFVFRRNKRRKDRKPLRATLASLDDNATDYQAAYSAGGTRGRRAAGWRCGGHSSSSGSGSSVEMTDSSLHRRQNWETHPSGDWDRPERPGQMNRTCPPPRTPSDAFSVVSFSSSGSALSPRSSPPANGQRAGGGTCSSGVGRRPVKCQRCGSGRVKLFATTVVSARRSPTHLLRQPPRGASSDSYCARAGHTRENAGGGGSRNGGTPSYSVAGSGSSTSCTDRLRLAPVSNRHTQRGNARKVTSMLSPRRKNLAGLSDTGRISTGGVSLAELRGGERNAANRPRGLMDGAAVVGSRKASVRPPPGGGIIIPAPKPHLRTPVSSGGSGL 733
            S V S +SSVASTASRVRKRRPSVLGGGFSTAGSCASSSPKSIQGSWIEDDTDPKAGPCWQQRDAGRVGHPAIRRGSRSDGHDDXXXXXXXXXXXXXXXXXTESTEITVVGWGDRSSRRNSSRRASREETAEWNDGRPRRLSSKGVVLATXXXXXXXXXXXXXXYDGTANETHQVEAGVRNKDKTLGGAATSIGTAIAYVG GSDDGSGVSISVERATEIATIPTITPPPFQGGQQAAAAAATSIPSVAQPSPAGETPEIGTQSPASQSAGEGASAKSGMTPTRMGLAASAPNLPTLGSMNNESDQHSSRSGSRFPQVLPRQRWCQEGRGASVRHRAGLAVAAGGGLGGCGVLPDGGGQKVFHNFVFRRNKRRKDRKPLRATLASLDDNATDYQAAYSAGGTRGRRAAGWR                                     PERPGQMNRTCPPPRTPSDAFSVVSFSSSGSALSPRSSPPANGQRAGGGTCSSGVGRRPVKCQRCGSGRVKLFATTVVSARRSPTHLLRQPPRGASSDSYCARAGHTRENAGGGGSRNGGTPSYSVAGSGSSTSCTDRLRLAPVSNRHTQRGNARKVTSMLSPRRKNLAGLSDTGRISTGGVSLAELRGGERNAANRPRGLMDGAAVVGSRKASVRPPPGGGIIIPAPKPHLRTPVSSGGSGL
Sbjct:    6 SRVVSLNSSVASTASRVRKRRPSVLGGGFSTAGSCASSSPKSIQGSWIEDDTDPKAGPCWQQRDAGRVGHPAIRRGSRSDGHDDXXXXXXXXXXXXXXXXXTESTEITVVGWGDRSSRRNSSRRASREETAEWNDGRPRRLSSKGVVLATXXXXXXXXXXXXXXYDGTANETHQVEAGVRNKDKTLGGAATSIGTAIAYVGSGSDDGSGVSISVERATEIATIPTITPPPFQGGQQAAAAAATSIPSVAQPSPAGETPEIGTQSPASQSAGEGASAKSGMTPTRMGLAASAPNLPTLGSMNNESDQHSSRSGSRFPQVLPRQRWCQEGRGASVRHRAGLAVAAGGGLGGCGVLPDGGGQKVFHNFVFRRNKRRKDRKPLRATLASLDDNATDYQAAYSAGGTRGRRAAGWR-------------------------------------PERPGQMNRTCPPPRTPSDAFSVVSFSSSGSALSPRSSPPANGQRAGGGTCSSGVGRRPVKCQRCGSGRVKLFATTVVSARRSPTHLLRQPPRGASSDSYCARAGHTRENAGGGGSRNGGTPSYSVAGSGSSTSCTDRLRLAPVSNRHTQRGNARKVTSMLSPRRKNLAGLSDTGRISTGGVSLAELRGGERNAANRPRGLMDGAAVVGSRKASVRPPPGGGIIIPAPKPHLRTPVSSGGSGL 659

[Close]

BLAST of Ec-28_002400.1 vs. uniprot
Match: A0A6H5L7Q0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Q0_9PHAE)

HSP 1 Score: 1120 bits (2897), Expect = 0.000e+0
Identity = 650/745 (87.25%), Postives = 666/745 (89.40%), Query Frame = 0

Query:    1 MSHWQRLLLSSLGGGETVNSWPPGFGDVARPLASPRHTQNNNRSLVSSTSSSVASTASRVRKRRPSVLGGGFSTAGSCASSSPKSIQGSWIEDDTDPKAGPCWQQRDAGRVGHPAIRRGSRSDGHDDXXXXXXXXXXXXXXXXX-TESTEITVVGWGDRSSRRNSSRRASREETAEWNDGRPRRLSSKGVVLATXXXXXXXXXXXXXXYDGTANETHQVEAGVRNKDKTLGGAATSIGTAIAYVG-GSDDGSGVSISVERATEIATIPTITPPPFQGGQQAA----AAAATSIPSVAQPSPAGETP-----EIGTQSPASQSAGEGASAKSGMTPTRMGLAASAPNLPTLGSMNNESDQHSSRSGSRFPQVLPRQRWCQEGRGASVRHRAGLAVAAGGGLGGCGVLPDGGGQKVFHNFVFRRNKRRKDRKPLRATLASLDDNATDYQAAYSAGGTRGRRAAGWRCGGHSSSSGSGSSVEMTDSSLHRRQNWETHPSGDWDRPERPGQMNRTCPPPRTPSDAFSVVSFSSSGSALSPRSSPPANGQRAGGGTCSSGVGRRPVKCQRCGSGRVKLFATTVVSARRSPTHLLRQPPRGASSDSYCARAGHTRENAGGGG-SRNGGTPSYSVAGSGSSTSCTDRLRLAPVSNRHTQRGNARKVTSMLSPRRKNLAGLSDTGRISTGGVSLAELRGGERNAANRPRGLMDGAAVVGSRKASVRPPPGGGIIIPAPKPHLRTPVSSGGSGL 733
            MSHW+RLLLSSL GGE VNSWPPGFGDVARPLASPRHTQN NRSLVSS SSSVASTASRVRKRRPSVLGGGFSTAGSCA+SSP SIQGSWIEDDTDPKAGPCWQQRDA RVGHPA R+GSRSDGH+DXXXXXXXXXXXX      TESTEITVVGWGDRSSRRNSSRRASREETAEWNDGRPRRLSSKGVVLATXXXXXXXXXXXX  YDGTANETHQVEAGVRNK KTLGGAATSIGTAIAYVG GSDDGSGVSISVERATEI TIPTITPPPF+G QQAA    AAAATSI SVAQPSP  ETP     ++ +QSPAS+SAGEG SAKS MTPTRMGLAASAPNLPTLGSMNNESDQ SS S SRFPQVLPRQRW QEGRGASVRHRAGLAVAAGGGL GCGVL DG GQKVFHNFVFRRNKRRKDRKPLR TLASLDDNATDYQA  SAGG  GRRAAG RCGGHSSSS SGSSVEMT+SSL RRQNWE+HPSGDWDRPERPGQMNRT PPPR P DAFSVVSFSSSGSA SP SSPPANGQR GGG CSSGVGRRPVKCQRCGSGRVKLFATTV SARRSPTHLLRQP  GASSDS+CARA HTRENAGGGG SRNGG P+Y  AGSGS +S TDRLRL PVSNRH Q+ N   VTSMLSP RKNLAGLSDTGRI TGG  L ELRGGERNAANRPRGL+DGAAVVGSRKASVRPPPGGGIIIPAPKPHL T VSSGGSGL
Sbjct:    1 MSHWERLLLSSLSGGEPVNSWPPGFGDVARPLASPRHTQNKNRSLVSSASSSVASTASRVRKRRPSVLGGGFSTAGSCAASSPNSIQGSWIEDDTDPKAGPCWQQRDADRVGHPATRKGSRSDGHEDXXXXXXXXXXXXEDHDKKTESTEITVVGWGDRSSRRNSSRRASREETAEWNDGRPRRLSSKGVVLATXXXXXXXXXXXXQQYDGTANETHQVEAGVRNKVKTLGGAATSIGTAIAYVGNGSDDGSGVSISVERATEIVTIPTITPPPFRGWQQAAPNAAAAAATSIHSVAQPSPTRETPGIVTLKVSSQSPASKSAGEGVSAKSAMTPTRMGLAASAPNLPTLGSMNNESDQRSSGSVSRFPQVLPRQRWRQEGRGASVRHRAGLAVAAGGGLEGCGVLQDGRGQKVFHNFVFRRNKRRKDRKPLRDTLASLDDNATDYQAVASAGGISGRRAAGRRCGGHSSSSCSGSSVEMTESSLRRRQNWESHPSGDWDRPERPGQMNRTRPPPRMPRDAFSVVSFSSSGSARSPCSSPPANGQRVGGGPCSSGVGRRPVKCQRCGSGRVKLFATTVASARRSPTHLLRQPHSGASSDSFCARARHTRENAGGGGGSRNGGIPTYCDAGSGSRSS-TDRLRLGPVSNRHKQQRNTHLVTSMLSPWRKNLAGLSDTGRIGTGGELLGELRGGERNAANRPRGLIDGAAVVGSRKASVRPPPGGGIIIPAPKPHLMTRVSSGGSGL 744

The following BLAST results are available for this feature:

BLAST of Ec-28_002400.1 vs. uniprot

BLAST of Ec-28_002400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FXN3_ECTSI	0.000e+0	93.92	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L7Q0_9PHAE	0.000e+0	87.25	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..15
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..733
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:2202094..2206208 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_002400.1	Ec-28_002400.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 2200135..2206392 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_002400.1 ID=Ec-28_002400.1|Name=Ec-28_002400.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=734bp
MSHWQRLLLSSLGGGETVNSWPPGFGDVARPLASPRHTQNNNRSLVSSTS
SSVASTASRVRKRRPSVLGGGFSTAGSCASSSPKSIQGSWIEDDTDPKAG
PCWQQRDAGRVGHPAIRRGSRSDGHDDDDDDDRDEEEEEDHDNNTESTEI
TVVGWGDRSSRRNSSRRASREETAEWNDGRPRRLSSKGVVLATATATANS
QQRQQQQYDGTANETHQVEAGVRNKDKTLGGAATSIGTAIAYVGGSDDGS
GVSISVERATEIATIPTITPPPFQGGQQAAAAAATSIPSVAQPSPAGETP
EIGTQSPASQSAGEGASAKSGMTPTRMGLAASAPNLPTLGSMNNESDQHS
SRSGSRFPQVLPRQRWCQEGRGASVRHRAGLAVAAGGGLGGCGVLPDGGG
QKVFHNFVFRRNKRRKDRKPLRATLASLDDNATDYQAAYSAGGTRGRRAA
GWRCGGHSSSSGSGSSVEMTDSSLHRRQNWETHPSGDWDRPERPGQMNRT
CPPPRTPSDAFSVVSFSSSGSALSPRSSPPANGQRAGGGTCSSGVGRRPV
KCQRCGSGRVKLFATTVVSARRSPTHLLRQPPRGASSDSYCARAGHTREN
AGGGGSRNGGTPSYSVAGSGSSTSCTDRLRLAPVSNRHTQRGNARKVTSM
LSPRRKNLAGLSDTGRISTGGVSLAELRGGERNAANRPRGLMDGAAVVGS
RKASVRPPPGGGIIIPAPKPHLRTPVSSGGSGL*