Ec-00_000300.3 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_000300.3
Unique NameEc-00_000300.3
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length108
Homology
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BLAST of Ec-00_000300.3 vs. uniprot
Match: A0A6H5JE27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE27_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 2.150e-64
Identity = 113/116 (97.41%), Postives = 115/116 (99.14%), Query Frame = 1 
Query:  712 VLVRGGLQGLILDSPEHSDRTNTKNANGCTLRSCQRCKVPRSHLGNPRYDIRQNRRTAEGIDADIEYVKQGATKTERVERAKQRGVVVPKMSNPLKKLTFDRQLQVPFDILHADSL 1059
            VLVRGGLQGLILDSPEHSDRTNTKNANGCTLRSCQRCKVPR HLGNPRYDIRQNRRTAEG+DADIEYVKQGATKTERVERAKQRGVVVPK+SNPLKKLTFDRQLQVPFDILHADSL
Sbjct:  453 VLVRGGLQGLILDSPEHSDRTNTKNANGCTLRSCQRCKVPRRHLGNPRYDIRQNRRTAEGVDADIEYVKQGATKTERVERAKQRGVVVPKVSNPLKKLTFDRQLQVPFDILHADSL 568
[Close]
BLAST of Ec-00_000300.3 vs. uniprot
Match: A0A6H5JTN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTN6_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 6.050e-59
Identity = 107/120 (89.17%), Postives = 111/120 (92.50%), Query Frame = 1 
Query:  712 VLVRGGLQGLILDSPEHSDRTNTKNANGCTLRSCQRCKVPRSHLGNPRYDIRQNRRTAEGIDADIEYVKQGATKTERVERAKQRGVVVPKMSNPLKKLTFDRQLQVPFDILHADSLTSAA 1071
            VLVRG LQGLILDSPEHSDRTNTKNANGCTLRSCQRCKVPR HLGNPRYDIRQNRRTAEG+DA+IEYVKQGATKTE VERAKQRGVVVPK+S   KKLTFDRQLQ+PFDILHADSL   A
Sbjct:  236 VLVRGRLQGLILDSPEHSDRTNTKNANGCTLRSCQRCKVPRRHLGNPRYDIRQNRRTAEGVDANIEYVKQGATKTEGVERAKQRGVVVPKVS---KKLTFDRQLQIPFDILHADSLVCRA 352
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BLAST of Ec-00_000300.3 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 7.190e-31
Identity = 114/312 (36.54%), Postives = 148/312 (47.44%), Query Frame = 3 
Query:  375 WRRSGVHGWFNDRRSSRAFTNEGGLPVVSMGFLCSSDAFNYLS-GNRQYSVRGTYLAPGCTSSALLRRLRSWWMVTVGV-----KRDGKMKWAP*RLFFICSRTAAARA*GPVIRNPTRACEGRATRADPRQPGAQRQDEHEECQRLYTPVVPTLQSTT*PSRQPALRHPAKSADGRRHRCRYRVR-QARGHQDRARRARETTWRRGPQDVQPPEEADF-RSAASGT-VRHPACGQPDKCGRMINYVLSACNADGLAVVSGRLSLRQLLPPNVSPFGDITTAGGWAGLTGMQKWILSSIFGLLFAPIFADVN 1283
            WR+ G HGWF DRR+S    N  GLPV S G  CSSDAFNY S   ++YSV  T++  GC S ALLRRLRSW + T+G+     + D        RL     +   A      I    R     A    P       Q  H              +      R   +++ A+SADG R         + R  Q +  RA      R P    P +E  F R    G  V H +     K  +++ +VL A ++ G  +V GR + R++LPPNVSP  DIT+AGGWA LTG Q W++SSIF  L APIF+  N
Sbjct:    4 WRQQGYHGWFFDRRASGVHANLTGLPVFSTGLACSSDAFNYFSLSGKRYSVNATFVGLGCLSPALLRRLRSWHLATLGLPGAAWELDVLPLMKIIRLLQNGCKAEIAVGDKQTITALVRMGLLTANLDSPMHSLWTNQKHHNAKTERACQACTVPRKDLGNPRYDIVKN-ARSADGLREDLALVASIEKRQEQLKMSRALGVVVPRYPN---PLDEVTFDRVEGCGMDVLHQSALNAGK--KIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPN 309
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BLAST of Ec-00_000300.3 vs. uniprot
Match: D7FHE7_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE7_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 5.200e-30
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 3 
Query: 1290 RNTCAPPRSRPWLPGSGRTVTHPVATRRYAGLSEISWKHAVRARSWCALARTQATS 1457
            RNTCAPPRSRPWLPGSGRTVTHPVATRRYAGLSEISWKHAVRARSWCALARTQATS
Sbjct:    6 RNTCAPPRSRPWLPGSGRTVTHPVATRRYAGLSEISWKHAVRARSWCALARTQATS 61
[Close]
BLAST of Ec-00_000300.3 vs. uniprot
Match: A0A6H5JYK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYK1_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 5.920e-29
Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 3 
Query: 1575 AVGNANVGESKHKEVKKSATSASGRDNPVHIFRTWNDTQALKALCDGVRWSANGRVGGVEVTK 1763
            AVGNAN GESKHKEVKKSATSASGRDNPVHIFRTWNDTQALKALCDGVRWSA GRVGGVEVTK
Sbjct:   32 AVGNANFGESKHKEVKKSATSASGRDNPVHIFRTWNDTQALKALCDGVRWSAKGRVGGVEVTK 94
[Close]
BLAST of Ec-00_000300.3 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 3.890e-27
Identity = 87/244 (35.66%), Postives = 131/244 (53.69%), Query Frame = 3 
Query: 1071 RMINYVLSACNADGLAVVSGRLSLRQLLPPNVSPFGDITTAGGWAGLTGMQKWILSSIFGLLFAPIFADVNSMRNTCAPPRSRPWLPGSGRTVTHPVATR------RYAGLSEI--SWKHAVRARSWCA-LARTQATS*GCWRSGKESS---------QAGIACGGAGARIVPQRSAH-SRRYSKPCAVGNANVGESKHKEVKKSATSASGRDNPVHIFRTWNDTQALKALCDGVRWSANGRVG 1745
            +++ +VL A ++ G  +V GR + R++LPPNVSP  DIT+AGGWA LTG Q W++SSIF  L APIF+  N + +                 V   VA R        AG + +  +++  ++A SW + + R+ + +    R+ ++S            G+A G         +  H +R       V N NVGE+K+K+ K SA SASGRDN  H++ T ND+ A++AL DGV W+A+G  G
Sbjct:  134 KIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVR------------AMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSI------HKGLHIARNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQALADGVEWTASGWTG 359
[Close]
BLAST of Ec-00_000300.3 vs. uniprot
Match: D7FSA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA9_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 8.470e-27
Identity = 87/236 (36.86%), Postives = 124/236 (52.54%), Query Frame = 3 
Query: 1071 RMINYVLSACNADGLAVVSGRLSLRQLLPPNVSPFGDITTAGGWAGLTGMQKWILSSIFGLLFAPIFADVNSMRN-----TCAPPRSRPWLPGSGRTVTHPVATRRYAGLSEI-SWKH-AVRARSWCA--LARTQATS*GCWRSGKESSQAGIACGGA--GARIVPQRSAHSRRYSKPCAVGNANVGESKHKEVKKSATSASGRDNPVHIFRTWNDTQALKALCDGVRWSANGRVG 1745
            +++ +VL A ++    +V GR + R++LP NV P  DIT+AGGWA LTG Q W++SSIF  L APIF+  N + +       A    R  +  SG           +  L +  SW    VR+ S+ A  L   Q +     +  + +   G+A G    G  I P    +         V N NVGE+K+K+ K SA SASGRDN  H++RT ND+ A++AL DGV W+A+G  G
Sbjct:   15 KIMTFVLDALDSAVSEIVRGRFAWRRMLPQNVLPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDV-NSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLGTLQKSQIDQVQVKQVTRVMGVALGSIHKGLHIAPNVVVNG-------VVTNCNVGEAKNKQQKASAPSASGRDNAEHMWRTTNDSLAMQALADGVEWTASGWTG 242
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BLAST of Ec-00_000300.3 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 8.000e-26
Identity = 81/230 (35.22%), Postives = 124/230 (53.91%), Query Frame = 3 
Query: 1071 RMINYVLSACNADGLAVVSGRLSLRQLLPPNVSPFGDITTAGGWAGLTGMQKWILSSIFGLLFAPIFADVNSMRNTCAPPRSRPWLPGSGRTVTHPVATRRYAGLSEISWKHAVRARSW-CALARTQA-TS*GC---WRSGKESSQAGIACGGAGARIVPQRSAHSRRYSKPCAVGNANVGESKHKEVKKSATSASGRDNPVHIFRTWNDTQALKALCDGVRWSANGRVG 1745
            +++ +V+ A +  G  +V  R +  ++LPPNVSP  DIT+AGGW+ LTG Q W++SS F  L APIF+  +++       R+      + R    P      A +   +++  V+A SW C + R+ + T+ G     +S  E  +      G     + +    +R       V N NVGE+K+KE+K SA SASGRDN  HI+R  ND+ A+KAL D + W+A+G  G
Sbjct:  145 KIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSSPDNLGRYV---RTMVVTEVADRISVDPGTPAGKAAVCN-AFQDLVKACSWSCFVVRSPSFTAEGLRALQKSQLEQVKQATRVMGVALGTIHKGLHIARNVVVNGVVTNCNVGEAKNKELKASAPSASGRDNARHIWRATNDSLAIKALADAIEWTASGWTG 370
[Close]
BLAST of Ec-00_000300.3 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 3.730e-16
Identity = 68/191 (35.60%), Postives = 102/191 (53.40%), Query Frame = 3 
Query: 1179 DITTAGGWAGLTGMQKWILSSIFGLLFAPIFADVNSMRNTCAPPRSRPWLPGSGRTVTHPVATRRYAGLSEISWKHAVRARSW-CALARTQA-TS*GCW---RSGKESSQAGIACGGAGARIVPQRSAHSRRYSKPCAVGNANVGESKHKEVKKSATSASGRDNPVHIFRTWNDTQALKALCDGVRWSANG 1736
            DIT+AGG + LTG Q W++SSI   L APIF+  +++       R+      + R    P      A +   +++  V+A SW C + R+ + T+ G     +S +E  +      G     + +    +R       V N NVGE+K+KE+K SA SASGRDN  HI+R  ND+ A+KAL DG+ W+A+G
Sbjct:  102 DITSAGGRSALTGQQLWLVSSIVPFLLAPIFSSPDNLGRYV---RTMVVTEVADRISVEPGTPAGKAAVCN-AFQDLVKACSWSCFVVRSPSFTAEGLHVLQKSQQEQVKQATRVIGVALGTIHKGLHITRNVVVNGVVTNCNVGEAKNKELKASAPSASGRDNARHIWRATNDSLAIKALADGIEWTASG 288
[Close]
BLAST of Ec-00_000300.3 vs. uniprot
Match: A0A6H5KPX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX4_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.430e-14
Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = 1 
Query:  712 VLVRGGLQGLILDSPEHSDRTNTKNANGCTLRSCQRCKVPRSHLGNPRYDIRQNRRTAEGIDADIEYVKQGATKTERVERAKQRGVVVPKMSNPLKKLTFDR 1017
             LVR GL    LDSP HS   N K+ N  T  +CQ C VPR  LGNP+YDI +N RTA+G+  D++ V     K +RV+ ++  GVVVP+  NPL ++  DR
Sbjct:   22 ALVRLGLLTANLDSPMHSLWANQKHHNAKT--TCQACVVPRRDLGNPKYDIVKNARTADGLKEDLDRVAATEKKQDRVKLSRALGVVVPRYPNPLHEVAIDR 121
The following BLAST results are available for this feature:
BLAST of Ec-00_000300.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JE27_9PHAE2.150e-6497.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTN6_9PHAE6.050e-5989.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZI4_ECTSI7.190e-3136.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHE7_ECTSI5.200e-30100.00Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5JYK1_9PHAE5.920e-2996.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4Y8_ECTSI3.890e-2735.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSA9_ECTSI8.470e-2736.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWW9_ECTSI8.000e-2635.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K975_9PHAE3.730e-1635.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPX4_9PHAE1.430e-1447.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:461235..466265 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length1771
Hectar predicted targeting categorysignal anchor
Gene idEc-00_000300.3
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_000300Ec-00_000300Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 461228..466265 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000300.3Ec-00_000300.3Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 461521..461844 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000300.3.1Ec-00_000300.3.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 461235..461948 +
Ec-00_000300.3.2Ec-00_000300.3.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 462330..462677 +
Ec-00_000300.3.3Ec-00_000300.3.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 462926..463156 +
Ec-00_000300.3.4Ec-00_000300.3.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 463361..463561 +
Ec-00_000300.3.5Ec-00_000300.3.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 464325..464409 +
Ec-00_000300.3.6Ec-00_000300.3.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 466074..466265 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0003005UTR:Ec-00_000300.3Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 461235..461520 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_000300.3CDS:Ec-00_000300.3Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 461521..461844 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0003003UTR:Ec-00_000300.3Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 461845..461948 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_000300.3 ID=Ec-00_000300.3|Name=Ec-00_000300.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=108bp
MVRPACRPSSEKVLQLQPPAPGACRWSRTFGEGRGCTVGSMIGDRQGHSQ
TRVVFPLYRWASFVPAMLSTTCLAIGSTVCAVHILPRDAPLPLFSDVCDR
GGWSLLE*
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spliced messenger RNA

>Ec-00_000300.3 ID=Ec-00_000300.3|Name=Ec-00_000300.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1771bp|location=Sequence derived from alignment at chr_00:461235..466265+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
GAAGAGGAAGGGGAAGAGGAAGAAGAAGCGGAAGAGGAAGGAGAGGACGA
AACCCAACAGGGGCGGCCGGGAGGTGGGGTCCAAAGCACTGGCCATCTTG
TTGTGCGTGTCAACCCATTCGTGTTCAGGAGCGACATGCCCGACGGTATC
AAGAGCAAGCGCCGACGAGACCAAGATGTGGAGTCTGTTTGGGAGGTCAC
GAACAAGGAGGAGAACGTCGGAGTGAGTGCACTGGTAGGTCCGTGCATGG
TGTTGCCGGTGGGTACCAACATACCTACGCCCGCCGATGGTACGGCCAGC
ATGCCGACCTTCGTCGGAGAAGGTTTTGCAGCTACAACCCCCCGCACCAG
GCGCTTGCAGGTGGTCAAGAACGTTTGGAGAAGGTCGGGGGTGCACGGTT
GGTTCAATGATAGGCGATCGTCAAGGGCATTCACAAACGAGGGTGGTCTT
CCCGTTGTATCGATGGGCTTCCTTTGTTCCAGCGATGCTTTCAACTACCT
GTCTGGCAATAGGCAGTACAGTGTGCGCGGTACATATCTTGCCCCGGGAT
GCACCTCTTCCGCTCTTCTCCGACGTCTGCGATCGTGGTGGATGGTCACT
GTTGGAGTGAAAGCGCGATGGGAAGATGAAATGGGCCCCCTGACGTCTAT
TCTTCATATGCTCGAGAACGGCTGCCGCGCGCGCATGAGGACCAGTGATC
AGGAATCCCACACGGTGCTTGTGAGGGGAGGGCTACAAGGGCTGATCCTC
GACAGCCCGGAGCACAGCGACAGGACGAACACGAAGAATGCCAACGGTTG
TACACTCCGGTCGTGCCAACGCTGCAAAGTACCACGTAGCCATCTCGGCA
ACCCGCGCTACGACATCCGGCAAAATCGGCGGACGGCCGAAGGCATCGAT
GCCGATATCGAGTACGTCAAGCAAGGGGCCACCAAGACCGAGCGCGTCGA
GCGCGCGAAACAACGTGGCGTCGTGGTCCCCAAGATGTCCAACCCCCTGA
AGAAGCTGACTTTCGATCGGCAGCTTCAGGTACCGTTCGACATCCTGCAT
GCGGACAGCCTGAACAAGTGCGGCCGCATGATCAATTACGTGCTATCGGC
GTGCAATGCCGACGGGCTCGCAGTTGTGTCCGGGCGGTTGTCTCTGCGTC
AGCTTCTCCCGCCGAACGTTTCGCCGTTCGGAGATATCACCACTGCTGGA
GGATGGGCAGGCTTGACTGGAATGCAAAAGTGGATCCTGTCCAGCATCTT
CGGCCTGTTATTCGCACCGATATTCGCAGACGTCAACTCGATGGAGAAAT
ACGTGTGCTCCGCCGAGATCGAGGCCGTGGCTACCCGGATCGGGTCGAAC
TGTGACACACCCCGTGGCAACGAGAAGGTATGCCGGGCTTTCCGAGATCT
CATGGAAGCATGCAGTGCGAGCACGTTCATGGTGCGCCTTGGCTCGTACA
CAGGCAACGAGCTGAGGGTGCTGGAGAAGTGGCAAAGAGAGCAGGTCAAG
CAGGCATCGCGTGTGGTGGGGCTGGAGCTCGGATCGTTCCACAAAGGTCT
GCACATTCCCGACGATATTCGAAACCTTGGTGCGGTGGGCAACGCGAACG
TTGGCGAATCTAAGCACAAGGAAGTGAAGAAGTCGGCGACATCCGCGAGT
GGACGCGACAACCCGGTTCATATTTTCAGGACTTGGAACGACACCCAAGC
CCTGAAAGCGTTGTGCGACGGCGTCAGGTGGAGTGCGAACGGTCGCGTAG
GCGGGGTCGAGGTCACGAAGG
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protein sequence of Ec-00_000300.3

>Ec-00_000300.3 ID=Ec-00_000300.3|Name=Ec-00_000300.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=108bp
MVRPACRPSSEKVLQLQPPAPGACRWSRTFGEGRGCTVGSMIGDRQGHSQ
TRVVFPLYRWASFVPAMLSTTCLAIGSTVCAVHILPRDAPLPLFSDVCDR
GGWSLLE*
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mRNA from alignment at chr_00:461235..466265+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_000300.3 ID=Ec-00_000300.3|Name=Ec-00_000300.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5031bp|location=Sequence derived from alignment at chr_00:461235..466265+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
GAAGAGGAAGGGGAAGAGGAAGAAGAAGCGGAAGAGGAAGGAGAGGACGA
AACCCAACAGGGGCGGCCGGGAGGTGGGGTCCAAAGCACTGGCCATCTTG
TTGTGCGTGTCAACCCATTCGTGTTCAGGAGCGACATGCCCGACGGTATC
AAGAGCAAGCGCCGACGAGACCAAGATGTGGAGTCTGTTTGGGAGGTCAC
GAACAAGGAGGAGAACGTCGGAGTGAGTGCACTGGTAGGTCCGTGCATGG
TGTTGCCGGTGGGTACCAACATACCTACGCCCGCCGATGGTACGGCCAGC
ATGCCGACCTTCGTCGGAGAAGGTTTTGCAGCTACAACCCCCCGCACCAG
GCGCTTGCAGGTGGTCAAGAACGTTTGGAGAAGGTCGGGGGTGCACGGTT
GGTTCAATGATAGGCGATCGTCAAGGGCATTCACAAACGAGGGTGGTCTT
CCCGTTGTATCGATGGGCTTCCTTTGTTCCAGCGATGCTTTCAACTACCT
GTCTGGCAATAGGCAGTACAGTGTGCGCGGTACATATCTTGCCCCGGGAT
GCACCTCTTCCGCTCTTCTCCGACGTCTGCGATCGTGGTGGATGGTCACT
GTTGGAGTGAAAGCGCGATGGGAAGATGAAATGGGCCCCCTGACGTCTAT
TCTTCATATGCTCGAGAACGGCTGCCGCGCGCGCATGAGGACCAGTGATC
AGGAATCCCACACGGTGAGGAATATAGTCAGATGCGCGTAGTTACTTGGG
GTTGGCACGCCGGCCGTCGGAACAATGTTCGGGCATCGTCCTATAACGTG
TTGATGTCGAATGTTGTCGGAAAACGCAGGTAGATGTTGATTGGTCGTAA
TGTGGTGTCGATACATACAAGGAGAGTTCTTACCGGTGGCGGACGCCAGC
TCAAGAAATGACACCCGATGCGAAGGTGAAAGTAGGCTTCAAATACCAGG
CGCCGGACGGTAGGAAACACCTCGTCGCATCTGCGTCTGGAACAGAACCA
GTGAACGGTAGGATTTCGTAGTATTCATCCACGTCCAGCTTGCACGTCTG
TACCAGTCCTTGATATGCCCCATCTTCATGATCTGTCGAACTCAGGTGCT
TGTGAGGGGAGGGCTACAAGGGCTGATCCTCGACAGCCCGGAGCACAGCG
ACAGGACGAACACGAAGAATGCCAACGGTTGTACACTCCGGTCGTGCCAA
CGCTGCAAAGTACCACGTAGCCATCTCGGCAACCCGCGCTACGACATCCG
GCAAAATCGGCGGACGGCCGAAGGCATCGATGCCGATATCGAGTACGTCA
AGCAAGGGGCCACCAAGACCGAGCGCGTCGAGCGCGCGAAACAACGTGGC
GTCGTGGTCCCCAAGATGTCCAACCCCCTGAAGAAGCTGACTTTCGATCG
GCAGCTTCAGGTACCGTTCGACATCCTGCATGCGGACAGCCTGGTAAGTG
GTTTCGTGTGTTGTCTGGGAACTACATCTGAATGTAGTAGACGTTATGGC
GTGTGCTCTAGAGAAACGTAGTGCGGCACATTTTGGTCGTGTCACCACCC
ACCCACCCCCTCACCCCTGCCCAACGTGTTTGCACATCCGGATCCAACCG
TGATACGTGATCCTCCCCTCGCGTGTAACCCCATACCCTTCATTGCCCCC
CCCCCCCCCCCCCATGCCCGTTCTACCTTCCTGATATCCAGAACAAGTGC
GGCCGCATGATCAATTACGTGCTATCGGCGTGCAATGCCGACGGGCTCGC
AGTTGTGTCCGGGCGGTTGTCTCTGCGTCAGCTTCTCCCGCCGAACGTTT
CGCCGTTCGGAGATATCACCACTGCTGGAGGATGGGCAGGCTTGACTGGA
ATGCAAAAGTGGATCCTGTCCAGCATCTTCGGCCTGTTATTCGCACCGAT
ATTCGCAGACGTCAACTCGATGGTTCGTGCATGTTGTGGACTTAAACATT
TTGGACTTCGTTCGCTCTAACCTATCTATCGTGCGCCTACCTAGCATAGG
ACAACAGCGCGAATCGATTACGAGTGTTTGCTGGATTCCGACCGCAAAAC
GAGGGTGCGTTATCACACCATCTCGGTTTCACGCCAATTCCTCTGTCCGT
TCCTTCGTGTGCATTGCCTATCCCAGGAGAAATACGTGTGCTCCGCCGAG
ATCGAGGCCGTGGCTACCCGGATCGGGTCGAACTGTGACACACCCCGTGG
CAACGAGAAGGTATGCCGGGCTTTCCGAGATCTCATGGAAGCATGCAGTG
CGAGCACGTTCATGGTGCGCCTTGGCTCGTACACAGGCAACGAGCTGAGG
GTGCTGGAGAAGTGGCAAAGAGAGCAGGTGAAGCTAGATTTCCATGTCTG
CTACGTTTGATCAGTTGTGTTTTTCTTCCGAAGTGTGTCTGTAGCACAGG
GCCTGCAGAGGGAGATCTCCACACTAAGTGTCCATTATAGTGTAGAACGC
TCGATACAGCCCTTTAGCGCGAACTGTCACTGAGGAGCTATGGCATATAG
TTCGGTTCCCCCAGTATACGTTGAGGTCAAAAATTGCAGTCGCATCGGCC
GCTCCAGTACCTGTTCCACCAACAGCTGGCGCTGGCGCTTGGGTAGGGTA
TGTTCCTCCCCCCCCCCCCCCCCCCCTCCCCTCCGCATCCCTCACAACTT
TGCTTTTGATGTACTTCCAACAGAGGGTACGTTGTTGTTGTTGTTGTTGT
TGTTGTTTTTCACGCTGGGGTGAAGCCAACAGTGGGGCAACAGTGGGGTA
GAGATATCACGCACGCACACACGTCCGCGCCCCGCTGTATATCCACGAGA
TTATGTTCATTTTGTGTTGTTCGTAACACAACGCTCGTAGCCGTACCTAG
TGCCGATGTGTTCTGTCACACAAGTGTTTTTGACGATGTCTGCCGCGAGC
CGCATTGAAAAAGTATCGGAAATTTCCCTCCGAACAGACTCGTTTATACC
AAACCATGCCTGATCGAAGTTTTGGCGTTTGTTCGGCGGGGGCGAGGGTG
CAGTCAAAGGGTCGTACGATATGGTTGCTTTTGCTTCGCTGTTGGGCAAT
CATTGTGTCAATATCCGCCCTACCCGCTGCACTCCTCAAGGTCAAGCAGG
CATCGCGTGTGGTGGGGCTGGAGCTCGGATCGTTCCACAAAGGTCTGCAC
ATTCCCGACGATATTCGAAACCTTGGTGAGCTCCCTCTGTGTAACTTTCG
CTGTAGGGTAGTGCCTCGGGTTGCTCGTTATTCTTCAAGTCCAACAAGTG
ATCGACTCTAACGTGGGGGGGGTGTTGTGCAAGCTCCCGGGGCCCCTCCT
GGGGGGGGGGGGGGGGGGGGTGTACTCATAGTCGTGCATGCCGTAGTCAT
TTGACCATTGACCTCGCATCCCTACAAAGCCGGGACGGAGCACGCCGGGT
TCTCACCGGACCAGGCTCTCACATCACCAAGCGCGAAGCACCGTGAGGTA
TTTGGCGAGTCGCATGAAGGGTGAGCTGCATCCTGCTAAGGGTGTTCGGC
ATCTTGTGCTTACTTCCTTGCGTACGGATGACAGCTACGTATGACTTAAT
TTATTTTCTGGTGCTTTCACTTCCAGAGACAGTTGTAAGCACTGTGTAAC
TGCCTCGAGGGTGCTTGACCATTTTAACACAACGTGGTGCGATCATCCCC
CGTTGCGCGGAGTGAGGTTTCTCGACCCCGCACAACATGATCTACTCGAC
CACCATTATGGTTACCGCCAAAAAAAAAAAAACGAGGTAAAAAAAAAAAA
AACGGTAACCTGGTTGCCGAGTTCACGAAGTGAATTGGCTTGTTTTACAA
CGTCGTTGCCAAGCGACGAAAACCCAATCCCGATGGCAAACACCGAGTGG
GGGGGGGGGGGTAAACATCATTTTTGTGGGGTTTAGGCAGTCGGCGAGTC
CGTGCGTCTGGCGTGGTGCGTGCGTTGAGTTGTCCAGGGGTGCCGGTTAT
TCCCATAAATGGGGGGGGGACATCAGGTCGAAAAAAGAAAACACGCCGCT
ACTTCTGCCTAACTCGGTTTCTTTCGTCCAGCATGTGATGAGTGATGACC
AGACTGCTGTAGCAGGGAAGGCACGACCTTCGCACAAAAGTGTAAATATG
TACAGGCGCAGTACATGCATCAATGATGGGGTGTCTAGAAGCACGCGTGT
TAGTGTCTCTCTATCGCTGATGACAAAAAGCCTAGGCGCTGTGCTCATCA
AAACCCACAAACAACGACGACACGGCCGCCGCCGATAGCTAGCAGCAGCA
GTAGAATAGGACACGCCCTTCCGTCTCGCTCTCCCGGTGGTGTATGTCTC
CGGTCCTTACGTTTTACTGTATGTTTCCTGTCTTTTGCCAGTAGCAGCAC
CACAGCAGTAGCACCAGAGAACCAAAAAAATACTGCCTTTTTTTGGGGGG
GGGGAACGGCTGGTCCCTAATTTAAGTTCGGCGCCGAGCACGGACTGAGC
TGGAAGCAAGTGGGGACAGCTCGGGCAAAAATGCTACTTGTTGGGAAAAA
GTGTTGGTTTGTGATATGGTGCCTAGTTTTTCCTGGGTATGTTGTGGGGG
GACAGACAGACAGACAGACACACCCGCAGGGGGGTTTTGCCCCCCCCCCC
CCTGTGCGAGCTTTTTTTCACTTGTGCACATCACATGTCCGGTCCCTCTA
ATTGATTTTGATCTTGCTTAAGCAAAAAGCCACCGCCTATCGGGCCACCT
TCCCACCAAAAGCTATTAAAATTATTCGAGCGAAGCGAGATTTCTAACGA
ATGAGACAGCCTTGCCGGTGGGACCAATGTACCCGCCCAAACCAGAACCA
TGGCCCGCGTCATCGACTTTTTTTTTTTTCGGACGAAAGGTGCGGTGGGC
AACGCGAACGTTGGCGAATCTAAGCACAAGGAAGTGAAGAAGTCGGCGAC
ATCCGCGAGTGGACGCGACAACCCGGTTCATATTTTCAGGACTTGGAACG
ACACCCAAGCCCTGAAAGCGTTGTGCGACGGCGTCAGGTGGAGTGCGAAC
GGTCGCGTAGGCGGGGTCGAGGTCACGAAGG
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Coding sequence (CDS) from alignment at chr_00:461235..466265+

>Ec-00_000300.3 ID=Ec-00_000300.3|Name=Ec-00_000300.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=324bp|location=Sequence derived from alignment at chr_00:461235..466265+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGTACGGCCAGCATGCCGACCTTCGTCGGAGAAGGTTTTGCAGCTACA
ACCCCCCGCACCAGGCGCTTGCAGGTGGTCAAGAACGTTTGGAGAAGGTC
GGGGGTGCACGGTTGGTTCAATGATAGGCGATCGTCAAGGGCATTCACAA
ACGAGGGTGGTCTTCCCGTTGTATCGATGGGCTTCCTTTGTTCCAGCGAT
GCTTTCAACTACCTGTCTGGCAATAGGCAGTACAGTGTGCGCGGTACATA
TCTTGCCCCGGGATGCACCTCTTCCGCTCTTCTCCGACGTCTGCGATCGT
GGTGGATGGTCACTGTTGGAGTGA
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Synonyms
The feature 'Ec-00_000300.3' has the following synonyms
Synonym
Esi1072_0001
Esi_1072_0001