Ec-00_003430.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_003430.2
Unique NameEc-00_003430.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length314
Homology
[Close]
BLAST of Ec-00_003430.2 vs. uniprot
Match: D7FRQ4_ECTSI (Protein YIPF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ4_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 2.550e-69
Identity = 160/230 (69.57%), Postives = 168/230 (73.04%), Query Frame = 2 
Query: 4661 AYGAPGASMGGYGGHAAAAVXXXXXXXXXXXXXXVGGGVVGAILEDEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYLTTRTWQVRLCSACASGCASS*RETTLWVHLWVRNVWVHRDGDG-------AQPNRRKAD*PLE---NDNVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 5320
            AYGAPGASMGG         XXXXXXXXXXXXXXVGGGVVGAILEDEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYL        L      G         L + L  +  + +  G G       A       + P++     +VLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY
Sbjct:  125 AYGAPGASMGGXXXXXXXXXXXXXXXXXXXXXXXVGGGVVGAILEDEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFG---------LCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 345
[Close]
BLAST of Ec-00_003430.2 vs. uniprot
Match: A0A6H5JG11_9PHAE (Protein YIPF n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG11_9PHAE)

HSP 1 Score: 244 bits (623), Expect = 4.330e-68
Identity = 159/230 (69.13%), Postives = 167/230 (72.61%), Query Frame = 2 
Query: 4661 AYGAPGASMGGYGGHAAAAVXXXXXXXXXXXXXXVGGGVVGAILEDEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYLTTRTWQVRLCSACASGCASS*RETTLWVHLWVRNVWVHRDGDG-------AQPNRRKAD*PLE---NDNVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 5320
            AYGAPGASMGG         XXXXXXXXXXXXXXVG GVVGAILEDEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYL        L      G         L + L  +  + +  G G       A       + P++     +VLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY
Sbjct:  127 AYGAPGASMGGXXXXXXXXXXXXXXXXXXXXXXXVGVGVVGAILEDEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYLDDTDLAGPLVFCLCFG---------LCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 347
[Close]
BLAST of Ec-00_003430.2 vs. uniprot
Match: A0A835Z6H4_9STRA (Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H4_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.420e-35
Identity = 82/189 (43.39%), Postives = 112/189 (59.26%), Query Frame = 2 
Query: 4769 GGVVGAILEDEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYLTTRTWQVRLCSACASGCASS*RETTLWVHLWVRNVWVHRDGDGAQPN--RRKAD*PLE---NDNVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 5320
            G V G        ++NEPPLLEELGINFEHIW+KT AV++PT++I+  YL        L  A   G          + +++    +    G GA         D P++     +VLGYCLLPV+ L+A+GI  DL G +G  L   AVAW   +AT+LFE+YL+MR QR+L+AYP+GLLY CFVL+ ++
Sbjct:   41 GAVGGXXXXXXXQFDNEPPLLEELGINFEHIWAKTRAVLVPTRRIESAYLDETDLAGPLVFALVFGTCLLLAGKLHFGYIYGFGAF----GCGALSLVLNLMGDRPIDAWRTTSVLGYCLLPVVLLSAVGIALDLSGRVGLALAGAAVAWSCTAATKLFEQYLDMRHQRWLIAYPIGLLYCCFVLMAIF 225
[Close]
BLAST of Ec-00_003430.2 vs. uniprot
Match: A0A7S2TR42_9EUKA (Protein YIPF n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TR42_9EUKA)

HSP 1 Score: 135 bits (340), Expect = 2.400e-32
Identity = 81/190 (42.63%), Postives = 103/190 (54.21%), Query Frame = 2 
Query: 4781 GAILEDEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYLTTRTWQVRLCSACASGCASS*RETTLWVHLWVRNVWVHRDGD----------GAQPNRRKAD*PLENDNVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 5320
            G  L D  DY+NEPPLLEELGINF+HI  KTLAV++PTK  D   +        L      G         L + L +   +++  G               +  K+       ++LGYCLLP++GLAA+  V  L+G LG  L    V WCTI+ATR  E  L MR QRYLVAYP+ LLY+CF LITV+
Sbjct:    2 GGSLSDLPDYDNEPPLLEELGINFDHIMQKTLAVLIPTKTPDHEIMIDADMAGPLVFCLLLGFC-------LMLRLKMHFGYIYGFGLIGCLGMYTILNLMSDPDKSIDIFRTISILGYCLLPIVGLAALSTVLSLKGYLGFGLTAFTVLWCTIAATRFVEATLGMRDQRYLVAYPLMLLYSCFALITVF 184
[Close]
BLAST of Ec-00_003430.2 vs. uniprot
Match: A0A8K1CDX0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDX0_PYTOL)

HSP 1 Score: 136 bits (342), Expect = 3.950e-32
Identity = 80/181 (44.20%), Postives = 111/181 (61.33%), Query Frame = 2 
Query: 4796 DEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYLTTRTWQVRLCSACASGCASS*RETTLWVHLW----VRNVWVHRDGDGAQPNRRKAD*PLENDNVLGYCLLPVIGLAAMGIVTDLR--GNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 5320
            D+E+YENEPPLLEELGINF+HIW KT +V+LPTK+I+ + L        L      G          + +++    +  V+++   +   P+R  A       +VLGYCLLP+IGLAA+ I   ++  G  G  L  VA+ W T +A+R FE+ L M  Q+YL+AYPVGL+YACFVLITV+
Sbjct:   44 DDEEYENEPPLLEELGINFDHIWLKTQSVLLPTKQINEHILDDADLAGPLVYCFVFGMCLLLAAKVHFGYIYGFGVLSCVFMYLLMNLLSPDR--AIDIYRVCSVLGYCLLPIIGLAAINIFVSVQKLGLAGFALATVAILWSTHTASRFFEKALYMSEQKYLIAYPVGLVYACFVLITVF 222
[Close]
BLAST of Ec-00_003430.2 vs. uniprot
Match: A0A7S0DM30_9EUKA (Protein YIPF n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DM30_9EUKA)

HSP 1 Score: 129 bits (324), Expect = 2.910e-30
Identity = 73/182 (40.11%), Postives = 102/182 (56.04%), Query Frame = 2 
Query: 4799 EEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYLTTRTWQVRLCSACASGCASS*RETTLWVHLWVRN--------VWVHRDGDGAQPNRRKAD*PLENDNVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 5320
            E D+ NEPPLLEELGINF+HIW KTLAV++P K++    +        L      G          + +++           + ++   D +    R A       ++LGYCLLP++ LAA  IV +L+G +G     V + WCT++ATR  E  L+MR QRYLVAYP+ LLY+CF LITV+
Sbjct:    5 ELDFSNEPPLLEELGINFDHIWQKTLAVLVPVKELKQEIMVDADMAGPLFFCLLLGFCLLLTGKVHFGYIYGFGLIGCLGMYIILNLMSDRSIDIYRTA-------SILGYCLLPIVSLAAASIVFNLKGYIGFSTTTVTILWCTVAATRFVEATLDMRPQRYLVAYPLMLLYSCFALITVF 179
[Close]
BLAST of Ec-00_003430.2 vs. uniprot
Match: A0A1V9YZW9_9STRA (Protein YIPF n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZW9_9STRA)

HSP 1 Score: 133 bits (334), Expect = 7.180e-30
Identity = 75/178 (42.13%), Postives = 108/178 (60.67%), Query Frame = 2 
Query: 4799 EEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYL--TTRTWQVRLCSACASGCASS*RETTLWVHLWVRNVWVHRDGDGAQPNRRKAD*PLENDNVLGYCLLPVIGLAAMGIVTDLRG--NLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 5320
            EEDY+NEPPLLEELG+NF HIW+KTL+V+LPTK+I+ N L  T     +  C    +    S +    +++ +    W          +  +        +VLGYCLLP+I LAA+ IV  ++G   +G +L  ++V W T +ATR FE+ L M  QR+L+AYP  ++Y+CFVLITV+
Sbjct:  152 EEDYDNEPPLLEELGVNFNHIWTKTLSVLLPTKQINENILDDTDLAGPLVFCFIFGTCLLLSGKIHFGYIYGFGLFGWAFMWAIMNLLSPTRTIDVYRVCSVLGYCLLPIILLAAINIVISIKGLNYVGFLLAMLSVIWSTHTATRFFEKALHMSDQRFLIAYPTAMVYSCFVLITVF 329
[Close]
BLAST of Ec-00_003430.2 vs. uniprot
Match: A0A067CVB2_SAPPC (Protein YIPF n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVB2_SAPPC)

HSP 1 Score: 131 bits (330), Expect = 1.420e-29
Identity = 76/179 (42.46%), Postives = 107/179 (59.78%), Query Frame = 2 
Query: 4796 DEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYL--TTRTWQVRLCSACASGCASS*RETTLWVHLWVRNVWVHRDGDGAQPNRRKAD*PLENDNVLGYCLLPVIGLAAMGIVTDLRG--NLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 5320
            D+EDYENEPPLLEELG+NF HIW KT +V+LPTK+I  + L  T     +  C    +    S +    +++ +    WV         +  +        +VLGYCLLP+I LAA+ IV  ++    +G  L F++VAW T +ATR FE+ L M  QR+L+AYP  ++Y+CFVLITV+
Sbjct:  128 DDEDYENEPPLLEELGVNFGHIWMKTQSVLLPTKEITEHILDDTDLAGPLVFCFVFGTCLLLSGKIHFGYIYGFGVFGWVFMWAIMNLLSPTRTIDIYRVCSVLGYCLLPIILLAAVNIVVSVKSLNYIGLALAFLSVAWSTQTATRFFEKALHMHDQRFLIAYPTAMVYSCFVLITVF 306
[Close]
BLAST of Ec-00_003430.2 vs. uniprot
Match: A0A2D4BQN0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQN0_PYTIN)

HSP 1 Score: 128 bits (322), Expect = 4.450e-29
Identity = 76/186 (40.86%), Postives = 108/186 (58.06%), Query Frame = 2 
Query: 4781 GAILEDEEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYLTTRTWQVRLCSACASGCASS*RETTLWVHLWVRNV----WVHRDGDGAQPNRRKAD*PLENDNVLGYCLLPVIGLAAMGIVTDLR--GNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 5320
            G +  D+EDY NEPPLLEELGINFEHIW+KT +V+LPTK+I+ + L        L      G          + +++   V    +++       P R          +VLGYCLLP+I LAA+ I   ++  G +G  +  + + W T +A+R FE+ L M  Q+YL+AYPVGL+Y+CFVLITV+
Sbjct:   71 GYVDPDDEDYXNEPPLLEELGINFEHIWTKTQSVLLPTKQINEHILDDADLAGPLVYCFVFGFCLLLAAKVHFGYIYGFGVLSCLFMYLLMXLLSPERSIDI--YRVCSVLGYCLLPIIALAAVNIFISVKDLGLIGFAMASLCILWSTHTASRFFEKALYMSEQKYLIAYPVGLVYSCFVLITVF 254
[Close]
BLAST of Ec-00_003430.2 vs. uniprot
Match: A0A1V9Y9B9_9STRA (Protein YIPF n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y9B9_9STRA)

HSP 1 Score: 129 bits (323), Expect = 9.200e-29
Identity = 76/178 (42.70%), Postives = 107/178 (60.11%), Query Frame = 2 
Query: 4799 EEDYENEPPLLEELGINFEHIWSKTLAVILPTKKIDINYL--TTRTWQVRLCSACASGCASS*RETTLWVHLWVRNVWVHRDGDGAQPNRRKAD*PLENDNVLGYCLLPVIGLAAMGIVTDLRG-NL-GHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 5320
            +EDYENEPPLLEELG+NF HIW KT +V+LPTK+I  + L  T     +  C    +    S +    +++ +    WV         +  +        +VLGYCLLP+I LAA+ I+  ++G NL G  L  ++VAW T +ATR FE+ L M  QR+L+AYP  ++Y+CFVLITV+
Sbjct:  118 DEDYENEPPLLEELGVNFGHIWMKTQSVLLPTKQITEHILDDTDLAGPLVFCFIFGTCLLLSGKIHFGYIYGFGVFGWVFMWAIMNLLSPTRTIDIYRVCSVLGYCLLPIIFLAAVNIIISVKGLNLIGFALAVLSVAWSTHTATRFFEKALHMSEQRFLIAYPTAMVYSCFVLITVF 295
The following BLAST results are available for this feature:
BLAST of Ec-00_003430.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRQ4_ECTSI2.550e-6969.57Protein YIPF n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JG11_9PHAE4.330e-6869.13Protein YIPF n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A835Z6H4_9STRA1.420e-3543.39Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2TR42_9EUKA2.400e-3242.63Protein YIPF n=1 Tax=Lotharella oceanica TaxID=641... [more]
A0A8K1CDX0_PYTOL3.950e-3244.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0DM30_9EUKA2.910e-3040.11Protein YIPF n=1 Tax=Amorphochlora amoebiformis Ta... [more]
A0A1V9YZW9_9STRA7.180e-3042.13Protein YIPF n=1 Tax=Thraustotheca clavata TaxID=7... [more]
A0A067CVB2_SAPPC1.420e-2942.46Protein YIPF n=2 Tax=Saprolegnia TaxID=4769 RepID=... [more]
A0A2D4BQN0_PYTIN4.450e-2940.86Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A1V9Y9B9_9STRA9.200e-2942.70Protein YIPF n=1 Tax=Achlya hypogyna TaxID=1202772... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:3403316..3414677 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length6813
Hectar predicted targeting categorysignal peptide
Gene idEc-00_003430.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_003430Ec-00_003430Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 3403316..3414677 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003430.2Ec-00_003430.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 3412193..3413134 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003430.2.6Ec-00_003430.2.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3403316..3405028 -
Ec-00_003430.2.5Ec-00_003430.2.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3406038..3406144 -
Ec-00_003430.2.4Ec-00_003430.2.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3406933..3407004 -
Ec-00_003430.2.3Ec-00_003430.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3408010..3408267 -
Ec-00_003430.2.2Ec-00_003430.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3409764..3409985 -
Ec-00_003430.2.1Ec-00_003430.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 3410237..3414677 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0034303UTR:Ec-00_003430.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_00 3403316..3405028 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_003430.2CDS:Ec-00_003430.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 3412193..3413134 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0034305UTR:Ec-00_003430.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 3413135..3414677 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_003430.2 ID=Ec-00_003430.2|Name=Ec-00_003430.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=314bp
MLRVLPIYLIAPLLVCIVMLREKPNSSLPSLQNKQKKTLTQQTLLQPSPD
SLFSLVQSRLSLSLSITEYESTPKHFLHCKFITKPRCNAKDSLLTIIPDN
LPTIIYVDPCSIIQPSATLFPSERTSCPPDLGDPPPAFRRVGVRTKDQKN
NNIRNSSSRKLMEKQSSSIANSKTKIQSNTKTQTQTNTKQILSKLKLLHL
PAHQPRRFHPFLLPLLLPRGSHPRLCRGHPFLLALPRLGLHQVSRIRLDG
VCTAVSPEGLTRQCRGDCAFERGRQRQNQSPKASIQHVALLGRIPCNTPP
VLRSSDCCLSHSI*
back to top

spliced messenger RNA

>Ec-00_003430.2 ID=Ec-00_003430.2|Name=Ec-00_003430.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6813bp|location=Sequence derived from alignment at chr_00:3403316..3414677- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCATGTCGATCCAACACTTGGTAACAATGTCTGATAGTAAAACGATCAGC
GTTGTGCTCTAAAGCCACTACCTTCATCGAGTGGCAAGTGAGTTGGTTTT
GACCTGCTTCAAAACAAGCTCACAACAGGTATAGCCTCTCTCAACATCAT
GCATCGTTCCTTGCAACACACAACGGCCATTTCCCCCTGCAAATTCAACG
CGAAAAAGAATTTTCGTCATGCGATGTGCCCGTCGCGAGCGACTCTCCTT
ACTCTTGATCGAAGCACGTCAAAACCAACTCACTTCCCACCCGATGAAAG
CAGTGGGTGGCTGTAGAGGACATCCCTCAAGGTTTTACCGTCACACGTTC
AATATCAAGTGTGGGATCGACATGGGTGTGTCATCTGTTGCTGGGTCAAA
CAAGGTAGTCCGTACACTACTACTGCTGCTGTGTTGGAAGGATTCTTGGC
GCTGGTTCGAGACAAGACATGACAGAAACATGTTTTCTTGTGAGCTCCTG
ACTCATCTTTCGTTGCCATGATCGCCCGTGCGCATCTGGGGTGCCTAAGA
TTCCTTTTCGTGTGCAATGCAACGTTCGTTTTTCATGGCGGAGTCGGCGA
CTGATTGCGATGCAAAGAGGATGTTGCGGATGGGCCGCCAGGTCACAAAG
AGCACTTGGGACGCCTCGAAAATTGTCAACTCGCCGCTTTCAGCCGAGCT
GACAACTTTTCCACCGGCAAACAAACAATCTTGCAACAAATATTGGGCAG
GAAAACATGGAATGACCCCCCCCAAACCCCTTCTCTAACAGTTGTGAGTG
AAAAGCGTGGCAGGAGGGGTTGGGAGGAGAACACATAGTATGCGGCTGAT
CGGCGACGTGTGATGTCTGGCTTGTTAATAAAAGCAGAATTGGTTTCGCG
AATCCGCACCACTGAAATTGCAGTGACATCGCCTGCGACTGGGTTGTTGT
CGGAATTTTTCGGGCCGCCGAAAAATTACACGCCGAAAAAATGCATATCT
GTGAAGTTGTAGTCTATCACGGTATATACGATGGAGTGAAGCCAATGTTC
TCCGCAAGAGGCAATTATGAAAAAGTCTCCCCGCTATTTGTCTATTGGTT
GGTGCGGGACATTGGGTGCTGTGCATAAAGAGCTCTCCCCCACTTCCGGC
ATAGACTATGAAATGCCCACAAGTATCTTATTGTCAGGCATCGACAAGAT
GGCTCTATCCATCTTCAGGTGGAGGAGGCCCTTGATCGATAATTCGGGTG
GCTCGGTTCTTTGTGCTTGGAGCTCAAAGCGGGTGGCTCATGGCGGGGCG
TGGAAGGGTAGAAACATGTAGCAAACGTATCGAAAAGGATTGTATTCGTC
GGGGGCGTGCCAGTGCTCGTCAAACCTTCACGGTATCTGGGCACGCCTTC
ACTCTTTGTCACTCAACGAATCTCTCTGAATCTCCACCAAATACCTCTCG
CAACCAAGGAATATATGTAGAAAGTTCCTATCCCTCCGCATCTCATCACT
GTTACTTTCGTACGTACGTACCGGACATCTCAACCGTCATACTATGCTAC
GAGTACTCCCAATATATCTAATAGCCCCCCTACTCGTATGCATCGTCATG
CTCCGAGAAAAACCAAATTCCTCTTTACCATCTCTCCAAAACAAACAAAA
AAAAACTTTAACACAACAAACACTCCTCCAACCTTCACCAGACTCTCTCT
TTTCTCTTGTCCAATCTCGTCTCTCTCTCTCTCTCTCCATCACAGAATAC
GAATCGACCCCAAAACACTTCCTTCACTGCAAGTTCATCACAAAGCCACG
GTGCAATGCAAAAGACTCCTTGCTCACGATCATACCCGACAATCTACCAA
CTATAATCTACGTAGATCCATGCTCCATTATTCAACCATCAGCTACATTA
TTTCCTTCCGAAAGAACATCGTGCCCCCCTGATCTGGGAGATCCACCACC
TGCCTTTAGAAGGGTCGGAGTCAGAACCAAAGACCAAAAGAACAACAACA
TTCGAAATTCATCCAGTCGAAAACTCATGGAAAAACAATCCTCCAGCATC
GCAAATTCCAAGACAAAAATCCAATCCAACACCAAAACCCAAACCCAAAC
CAATACCAAACAAATCCTTTCAAAACTCAAACTCCTACATTTGCCGGCCC
ATCAACCCCGGCGCTTTCATCCATTCCTCCTGCCACTGCTTCTTCCCCGC
GGTAGCCACCCTCGCCTCTGCCGCGGGCACCCTTTTCTGCTGGCATTGCC
GCGGCTCGGGCTTCATCAGGTGTCACGTATCCGTCTGGATGGGGTGTGTA
CAGCTGTCTCTCCGGAGGGATTGACTCGACAGTGCAGGGGAGATTGCGCA
TTCGAAAGGGGAAGGCAAAGGCAAAATCAGTCACCCAAAGCGTCAATTCA
GCACGTGGCACTGCTGGGGAGAATACCTTGCAATACGCCCCCTGTTCTGC
GCAGCAGTGATTGTTGTCTTTCGCATTCTATATGACATCATGGTTACCTA
TCAAATCGAATGCCAATCTGCGACTGAGGTTAATTACTCCTCTTTCGCAA
AAAAGGCACAACGATTCTTGTGATTTGTCTGACAAGGTTAATTATTCCTC
GGTCACGCAAACAACAATGTTGGACCCATGTTAGAGCTTATACAGCAGTG
TTTCGGATCAACAACCCAACACATCTTCTTACTGGTGTACTACCACTGCG
CTGCTTTCGTGCAGATAGTGTTCTGGTCCGAAATGGAGATCATCTCTCTC
GATGTAATCCTGTCGGTTACACAGGCCCCTGACCAAATTTCCAAGTGTGT
CCCCTGCAAATCCTACCGTTTGACATGCAACGAACAGAACCCGCAACTCA
TGGTCGGTAGAGGGTACAAAGGTTCATGACGCCTTCGCATATCCCCGTAT
CAACGTAAAAGCAAAAACAATTGAATCGGAGATCAATCTCTGGATTTTTG
AAACATCCGGGACAAGGCATTTCCATAAAGTTCAAAAACTCAAGAAGGTA
TGCAGCAGCTTGGATAGGATTCGCTGTCAATCTCATCTAATCTTTCAGTT
TTTGTGGGTGACTGGCAACCTTACGTGGCGTAGCAGCCATATAACCTCAC
AGTTTTTGTGGGTGACTGGCAACCTTACGTGGCGTAGCAGCCATATAACC
TCGCAGTTTTGTGGATGACTGGCAACCTTACGTGGCGTAGCAGCCATACA
ACCTCGCAGTTTTTGTGGGTGACTGGCAACCTTACGTGGCGTAGCAGCCA
TATAACCTCGCAGTTTTGTGGATGACTGGCAACCTTACGTGGCGTAGCAG
CCATACAACCTCGCAGTTTTTGTGGGTGACTGGCAACCTTACGTGGCGTA
GCAGCCATATAACCTCGCAGTTTTGTGGATGACTGGCAACCTTACGTGGC
GTAGCAGCCATACAACCTCGCAGTTTTTGTGGGTGACTGGCAACCTTATT
TAGAATAAAACGCCCTGGGAAGGGGTCTACTGCTACTGCTGTAGTCTACC
TCGGAAATAACACGATTAAAGAAGACACGTACGTACGTATGCAGAAGAAA
CGCAACTTGGTGTGCTGAAGGTACACACCCAAACGAAATCTACGAAGACC
AACATGCACGCACACAGTAACCACTTCAGACGTAATACGATCAACAGATC
ATCACGTGCCTGAGCGGATCTACGACCCTAGTAGACGCATGCTGATGGTG
TTGCTGCTTGGCATCTCCAGTAGGTGACAGCAGCAGTCGTCACACCCAGC
TGCAGCTCACAACTCCAGCTCGGGATCCCGTGTTTCATCCGAGCTGCTAC
TCGCTGGTTGACCAGTTCTTCGATCCTGGCGTCCTCCGCTGCTTGGCGGG
CTTCCGCTGCTGGGCGGGATTCATCTTCGCGCCTGGTGGCCATCGTGACC
CTGCTCTTGATCGCCGCAAAGCGATGCTCCTAAACCAAGCTCGACCGCGA
ATCTCGTAGACGACGTGTCATACGCTAGCGTGATCGATAATTCGGGTGGC
TCGGTTCTTTGTGCTTGGAGCTCAAAGCGGGTGGCTCATGGCGGGGCGTG
GAAGGGTAGAAACATGTAGCAAACGTATCGAAAAGGATTGTATTCGTCGG
GGGCGTGCCAGTGCTCGTCAAACCTTCACGGTATCTGGGCACGCCTTCAC
TCTTTGTCACTCAACGAATCTCTCTGAATCTCCACCAAATACCTCTCGCA
ACCAAGGAATATATGTAGAAAGTTCCTATCCCTCCGCATCTCATCACTGT
TACTTTCGTACGTACGTACCGGACATCTCAACCGTCATACTATGCTACGA
GTACTCCCAATATATCTAATAGCCCTGCAACAATTATGCACCCCCCCACA
GATGAACACAGCAGCTCACAATAGAAAACAGAGCGAAACGGAAACCGCGC
CATAGATGACAACATGCAATCACCCGCCTCATCCCAAGCTGGCAAAGAGG
TGCTCAATCAACGACGCATCAGATTCCCTCTGTCTCTATTGTCACGTGTG
CCTAACCATGGAGGACGAATGGTACTCGGGAGCTGATACAACCGATGGGA
CTGGCGGCGGGGGTGGAGGAGCCCTTGCTGGGGGCGGTGCACAGCAGAGA
ACGCCGTACGGGGACTCGTTCACCCCACCGAGCTCCCAAGGCGGAATAAT
GGCAGGCCAGCAGGCCTACGGAGCTCCTGGCGCAAGCATGGGCGGCTATG
GCGGGCACGCAGCAGCAGCCGTAGGGGCGGGAGGCATGCGGGCGGAGGGA
GTGGGCGGCCGAGGGGTGGGGGGCGGGGTCGTCGGTGCCATCCTGGAGGA
CGAGGAGGACTACGAGAACGAGCCCCCGTTGCTGGAGGAGCTGGGCATCA
ACTTCGAGCACATCTGGTCGAAAACGCTCGCGGTGATCTTGCCCACGAAG
AAGATCGACATCAACTACCTGGACGACACGGACCTGGCAGGTCCGCTTGT
GTTCTGCTTGTGCTTCGGGCTGTGCCTCCTCTTGACGGGAAAGCCACACT
TTGGGTACATCTATGGGTTCGGAATGTTTGGGTGCATCGCGACGGCGATG
GTGCTCAACCTAATCGGAGAAAAGCCGATTGACCTCTGGAAAACGACAAG
TGTTCTGGGGTACTGCCTCTTGCCGGTCATCGGCTTAGCGGCGATGGGGA
TAGTGACGGACCTGCGTGGGAACTTGGGGCACGTGCTGGGGTTCGTGGCG
GTGGCCTGGTGCACCATTTCGGCCACCCGCTTGTTCGAGGAGTATCTGGA
GATGCGAAGACAGCGGTATCTCGTGGCCTACCCTGTAGGCCTGCTGTACG
CTTGTTTCGTTCTCATCACGGTGTACTAACCGGGGTATTGCGTCTCTTGT
GCTGGTGTTTTTGTGGGGGATCGATGCGCGCGCACACACATCGCCCTGCT
GGTGTAGTACGTGAAGCACTGCTGTCAAGTGTAACGTTCCGAAGATCGCG
CGCACTTCGTGGTAGATCGAGGTGTTGCCATCATTGTTGTTTCTGTGGTC
GCTGCTGCTGTTCTCGTGTAGCAAGGAACGGATGAGTTGAAATCGGTAGA
CATGAGGATTTGTTCGGCTATACTCGCCAGGGGTGCTCACTCACCGCTGG
CCCGCAACAATAACAGCCCGGGTCGTGTTTGCAGCAGCAGCACTTTTCGT
CGGCATGGTAAAAGTCCGTCGGGCGGATGTGCACTAGCTCTTGTACCGTC
AGTCCACAAACTTGTGGGAGGTGCCTCACCAGACGAGGGGGGTGGACAGG
TCGGCTTGACACTCCAAGCGGCGGCGCTGTTTCTAGGACTACAGCAGTTC
GCAGAGAAAGCGGTTGTTTCTCAGTTCAGCAACAAAGTGGGTATCGTTGC
CACGAACGTCCGCTGATTTCGTACACAAGATGTTTGGGCTCTTGTGTTTG
GTTGAGCCTGCCTGCGTACGGCGACTGAGGGCAATACAATGTTGCAGTGT
AGTCGCTCTGAGAATGCATCGTCGGCCTAGAGTGTGTGGTTCTTGGCGTA
ACATAAGTGCGGATATGTGTGTAAATAGGTTTGGGGGGGTCAGTGCGTTG
TATTAGCCTTGGGCTTGCCTGTCATTCATCGGTGCTTTGTCCGATAGGAT
TGTCCGTCTCAAGCGGTGGTGTTACGGTAAAAAAATATCAAGCAATCATG
TTCGGTGTCACACTTGCCCATGTGGTCCACGTTTCAACAAAAGGGATGCC
AACAACGAAAGATGGGTCTCTGGGCATGGTATTTTGAGCGCCGCACTTTT
CCACGCCCACCTTGCTTACTTTGGAGAACTTTGCACTCAATGAATCAGCC
CGTGGTGTGTGGCGATGTTGTGTGTAACTTACGGTTCAGTTCACGACCAG
CCTCAGCCTGAGTGAAAGCGTTTGTTGTTTTGGCCTTTCAGTTATTATTT
TGCCCTCTTCTTTCACCTAACGGGGACGCCAAAGAACAAAAGTACCACTA
ATGCTCAGCGCCGAGGCTTTAAAGTCCAACATAAGGAGCCACACGTCGAA
CTGGCCAAAACCATCACCGATACCTGAAAGCTTCGCCTTATACTGTACCA
AGAACACTCCCATCTTCGAAAAAAACACGATCACACCATGACATGTAATC
GAGTACATGACTCGACCTCCTCCTCCAAACTAGAAACGTGAAATACAACC
CTCCAAGTGTTGGGGGCGACGACTAATAAACTCTGGCAAGGTTGAATCGT
CCCCGACCAATCCCGTTTCGGCGACGCCTCTTCTTCGTCGCCGCCACCCC
CGAGAGCTGCTTCATCCGAAACGTCACGTAGTCCTGCCCTCGGTGAGCTG
CCTGGTTATACAG
back to top

protein sequence of Ec-00_003430.2

>Ec-00_003430.2 ID=Ec-00_003430.2|Name=Ec-00_003430.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=314bp
MLRVLPIYLIAPLLVCIVMLREKPNSSLPSLQNKQKKTLTQQTLLQPSPD
SLFSLVQSRLSLSLSITEYESTPKHFLHCKFITKPRCNAKDSLLTIIPDN
LPTIIYVDPCSIIQPSATLFPSERTSCPPDLGDPPPAFRRVGVRTKDQKN
NNIRNSSSRKLMEKQSSSIANSKTKIQSNTKTQTQTNTKQILSKLKLLHL
PAHQPRRFHPFLLPLLLPRGSHPRLCRGHPFLLALPRLGLHQVSRIRLDG
VCTAVSPEGLTRQCRGDCAFERGRQRQNQSPKASIQHVALLGRIPCNTPP
VLRSSDCCLSHSI*
back to top

mRNA from alignment at chr_00:3403316..3414677-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_003430.2 ID=Ec-00_003430.2|Name=Ec-00_003430.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=11362bp|location=Sequence derived from alignment at chr_00:3403316..3414677- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCATGTCGATCCAACACTTGGTAACAATGTCTGATAGTAAAACGATCAGC
GTTGTGCTCTAAAGCCACTACCTTCATCGAGTGGCAAGTGAGTTGGTTTT
GACCTGCTTCAAAACAAGCTCACAACAGGTATAGCCTCTCTCAACATCAT
GCATCGTTCCTTGCAACACACAACGGCCATTTCCCCCTGCAAATTCAACG
CGAAAAAGAATTTTCGTCATGCGATGTGCCCGTCGCGAGCGACTCTCCTT
ACTCTTGATCGAAGCACGTCAAAACCAACTCACTTCCCACCCGATGAAAG
CAGTGGGTGGCTGTAGAGGACATCCCTCAAGGTTTTACCGTCACACGTTC
AATATCAAGTGTGGGATCGACATGGGTGTGTCATCTGTTGCTGGGTCAAA
CAAGGTAGTCCGTACACTACTACTGCTGCTGTGTTGGAAGGATTCTTGGC
GCTGGTTCGAGACAAGACATGACAGAAACATGTTTTCTTGTGAGCTCCTG
ACTCATCTTTCGTTGCCATGATCGCCCGTGCGCATCTGGGGTGCCTAAGA
TTCCTTTTCGTGTGCAATGCAACGTTCGTTTTTCATGGCGGAGTCGGCGA
CTGATTGCGATGCAAAGAGGATGTTGCGGATGGGCCGCCAGGTCACAAAG
AGCACTTGGGACGCCTCGAAAATTGTCAACTCGCCGCTTTCAGCCGAGCT
GACAACTTTTCCACCGGCAAACAAACAATCTTGCAACAAATATTGGGCAG
GAAAACATGGAATGACCCCCCCCAAACCCCTTCTCTAACAGTTGTGAGTG
AAAAGCGTGGCAGGAGGGGTTGGGAGGAGAACACATAGTATGCGGCTGAT
CGGCGACGTGTGATGTCTGGCTTGTTAATAAAAGCAGAATTGGTTTCGCG
AATCCGCACCACTGAAATTGCAGTGACATCGCCTGCGACTGGGTTGTTGT
CGGAATTTTTCGGGCCGCCGAAAAATTACACGCCGAAAAAATGCATATCT
GTGAAGTTGTAGTCTATCACGGTATATACGATGGAGTGAAGCCAATGTTC
TCCGCAAGAGGCAATTATGAAAAAGTCTCCCCGCTATTTGTCTATTGGTT
GGTGCGGGACATTGGGTGCTGTGCATAAAGAGCTCTCCCCCACTTCCGGC
ATAGACTATGAAATGCCCACAAGTATCTTATTGTCAGGCATCGACAAGAT
GGCTCTATCCATCTTCAGGTGGAGGAGGCCCTTGATCGATAATTCGGGTG
GCTCGGTTCTTTGTGCTTGGAGCTCAAAGCGGGTGGCTCATGGCGGGGCG
TGGAAGGGTAGAAACATGTAGCAAACGTATCGAAAAGGATTGTATTCGTC
GGGGGCGTGCCAGTGCTCGTCAAACCTTCACGGTATCTGGGCACGCCTTC
ACTCTTTGTCACTCAACGAATCTCTCTGAATCTCCACCAAATACCTCTCG
CAACCAAGGAATATATGTAGAAAGTTCCTATCCCTCCGCATCTCATCACT
GTTACTTTCGTACGTACGTACCGGACATCTCAACCGTCATACTATGCTAC
GAGTACTCCCAATATATCTAATAGCCCCCCTACTCGTATGCATCGTCATG
CTCCGAGAAAAACCAAATTCCTCTTTACCATCTCTCCAAAACAAACAAAA
AAAAACTTTAACACAACAAACACTCCTCCAACCTTCACCAGACTCTCTCT
TTTCTCTTGTCCAATCTCGTCTCTCTCTCTCTCTCTCCATCACAGAATAC
GAATCGACCCCAAAACACTTCCTTCACTGCAAGTTCATCACAAAGCCACG
GTGCAATGCAAAAGACTCCTTGCTCACGATCATACCCGACAATCTACCAA
CTATAATCTACGTAGATCCATGCTCCATTATTCAACCATCAGCTACATTA
TTTCCTTCCGAAAGAACATCGTGCCCCCCTGATCTGGGAGATCCACCACC
TGCCTTTAGAAGGGTCGGAGTCAGAACCAAAGACCAAAAGAACAACAACA
TTCGAAATTCATCCAGTCGAAAACTCATGGAAAAACAATCCTCCAGCATC
GCAAATTCCAAGACAAAAATCCAATCCAACACCAAAACCCAAACCCAAAC
CAATACCAAACAAATCCTTTCAAAACTCAAACTCCTACATTTGCCGGCCC
ATCAACCCCGGCGCTTTCATCCATTCCTCCTGCCACTGCTTCTTCCCCGC
GGTAGCCACCCTCGCCTCTGCCGCGGGCACCCTTTTCTGCTGGCATTGCC
GCGGCTCGGGCTTCATCAGGTGTCACGTATCCGTCTGGATGGGGTGTGTA
CAGCTGTCTCTCCGGAGGGATTGACTCGACAGTGCAGGGGAGATTGCGCA
TTCGAAAGGGGAAGGCAAAGGCAAAATCAGTCACCCAAAGCGTCAATTCA
GCACGTGGCACTGCTGGGGAGAATACCTTGCAATACGCCCCCTGTTCTGC
GCAGCAGTGATTGTTGTCTTTCGCATTCTATATGACATCATGGTTACCTA
TCAAATCGAATGCCAATCTGCGACTGAGGTTAATTACTCCTCTTTCGCAA
AAAAGGCACAACGATTCTTGTGATTTGTCTGACAAGGTTAATTATTCCTC
GGTCACGCAAACAACAATGTTGGACCCATGTTAGAGCTTATACAGCAGTG
TTTCGGATCAACAACCCAACACATCTTCTTACTGGTGTACTACCACTGCG
CTGCTTTCGTGCAGATAGTGTTCTGGTCCGAAATGGAGATCATCTCTCTC
GATGTAATCCTGTCGGTTACACAGGCCCCTGACCAAATTTCCAAGTGTGT
CCCCTGCAAATCCTACCGTTTGACATGCAACGAACAGAACCCGCAACTCA
TGGTCGGTAGAGGGTACAAAGGTTCATGACGCCTTCGCATATCCCCGTAT
CAACGTAAAAGCAAAAACAATTGAATCGGAGATCAATCTCTGGATTTTTG
AAACATCCGGGACAAGGCATTTCCATAAAGTTCAAAAACTCAAGAAGGTA
TGCAGCAGCTTGGATAGGATTCGCTGTCAATCTCATCTAATCTTTCAGTT
TTTGTGGGTGACTGGCAACCTTACGTGGCGTAGCAGCCATATAACCTCAC
AGTTTTTGTGGGTGACTGGCAACCTTACGTGGCGTAGCAGCCATATAACC
TCGCAGTTTTGTGGATGACTGGCAACCTTACGTGGCGTAGCAGCCATACA
ACCTCGCAGTTTTTGTGGGTGACTGGCAACCTTACGTGGCGTAGCAGCCA
TATAACCTCGCAGTTTTGTGGATGACTGGCAACCTTACGTGGCGTAGCAG
CCATACAACCTCGCAGTTTTTGTGGGTGACTGGCAACCTTACGTGGCGTA
GCAGCCATATAACCTCGCAGTTTTGTGGATGACTGGCAACCTTACGTGGC
GTAGCAGCCATACAACCTCGCAGTTTTTGTGGGTGACTGGCAACCTTATT
TAGAATAAAACGCCCTGGGAAGGGGTCTACTGCTACTGCTGTAGTCTACC
TCGGAAATAACACGATTAAAGAAGACACGTACGTACGTATGCAGAAGAAA
CGCAACTTGGTGTGCTGAAGGTACACACCCAAACGAAATCTACGAAGACC
AACATGCACGCACACAGTAACCACTTCAGACGTAATACGATCAACAGATC
ATCACGTGCCTGAGCGGATCTACGACCCTAGTAGACGCATGCTGATGGTG
TTGCTGCTTGGCATCTCCAGTAGGTGACAGCAGCAGTCGTCACACCCAGC
TGCAGCTCACAACTCCAGCTCGGGATCCCGTGTTTCATCCGAGCTGCTAC
TCGCTGGTTGACCAGTTCTTCGATCCTGGCGTCCTCCGCTGCTTGGCGGG
CTTCCGCTGCTGGGCGGGATTCATCTTCGCGCCTGGTGGCCATCGTGACC
CTGCTCTTGATCGCCGCAAAGCGATGCTCCTAAACCAAGCTCGACCGCGA
ATCTCGTAGACGACGTGTCATACGCTAGCGTGATCGATAATTCGGGTGGC
TCGGTTCTTTGTGCTTGGAGCTCAAAGCGGGTGGCTCATGGCGGGGCGTG
GAAGGGTAGAAACATGTAGCAAACGTATCGAAAAGGATTGTATTCGTCGG
GGGCGTGCCAGTGCTCGTCAAACCTTCACGGTATCTGGGCACGCCTTCAC
TCTTTGTCACTCAACGAATCTCTCTGAATCTCCACCAAATACCTCTCGCA
ACCAAGGAATATATGTAGAAAGTTCCTATCCCTCCGCATCTCATCACTGT
TACTTTCGTACGTACGTACCGGACATCTCAACCGTCATACTATGCTACGA
GTACTCCCAATATATCTAATAGCCCTGCAACAATTATGCACCCCCCCACA
GATGAACACAGCAGCTCACAATAGAAAACAGAGCGAAACGGAAACCGCGC
CATAGATGACAACATGCAATCACCCGCCTCATCCCAAGCTGGTATGTCCC
TGTCTAAAGCACACACCGTAGAAAGAAGCCGGAGTCTGGGTTCACCCGTT
TGTAGCCGGAGCCTGGGTGCCGTGTGCTGCCCGCGCAGTGCAGCAGCATT
CCCGCAGGCAGTCCGGTGGGGCTCCGTGGTCTTACCACCGTTTCAAATGT
CGTCACACACGCCTACCACTCCCCTGACCCATTTTCCGCCGTCCCCCTAA
TCTCGCCGCCGCTTGCCTGCCTCCGACGGGCACGCTGCACAGGCAAAGAG
GTGCTCAATCAACGACGCATCAGATTCCCTCTGTCTCTATTGTCACGTGT
GCCTAACCATGGAGGACGAATGGTACTCGGGAGCTGATACAACCGATGGG
ACTGGCGGCGGGGGTGGAGGAGCCCTTGCTGGGGGCGGTGCACAGCAGAG
AACGCCGTACGGGGACTCGTTCACCCCACCGAGCTCCCAAGGCGGAATAA
TGGCAGGCCAGCAGGTATCGCCAGCAGTGCAGAGCTTCCGGTCTATTGTG
CTTGAAAGCGAAAGACTGTTGTGTGCTCTTTGGATTGGGGTAGAGTTCTA
ATTTGACTATACCTGCATCCTCTGCATATCACGGGGTGTATGGTACGGCG
GGGAAGAAGCGGCCATGTGCCGTGCTGCCGTGTGCCTACAGCAGTGTAGG
TTGGTCCCAAAAGGGACCGTCCACCCTTACCGATGACCTCCGTCCCGGTT
GAAAGCCATACCCACCTCCGCGTTGTACGGGGGTTCTGTTCTGTCACGAA
CGCCCAGCTCCTTATGGCAAAGTTTATTGGAATATTTACTCCAGATTACC
GGCCGGGTGTACTCCAACGAGGATTCCCACGCAGCTGCTTTTCCTTCCGC
GAGCGTTTTGTTCGGTGTCGACGGCGGTGCCACTGCTGCTGTTGCACCTG
TTGACCCTCACCCATGCGCAAAACCGTTACCTCTTTGGGTGGAACATTAA
AGTATGTATGTCGTTCGGCCACGCCCCCTAATGTATGCATATCGCACATA
TACATACTGCCTCCATCGTGGTTGTACCAACGCTCGCACAGCCGAAAACA
ACCTTGGCATCACCCACAAGAAGACGCTGATACGCATAGCTTGCGTGATG
CCTGAGAAGGACGCTACAATATACATCAGGAGTGTTCGCAGCAATAATCC
ATTGTTTCCCTGTGCCGCAGCCCCCGCCTTTCGCGAGTCACCCACAAACA
CCCACATCAACAAGGCATGCGCCCGCCTGCTCGATATTCCCTTACGATCT
CGTACTGAACCTACGAGGGGCGCGGGGCACTCCGCTCTACCTCTTAACAG
TCTAAACAATAGTACACTGCTGTCTCGACGTCCTCTGGAGCCAGAGAGCG
CATTTTTGCCGCAGACAGCGGCAGTAATGTTGTGGCTGACTGCAGTGGCA
TTTCGGGAGTCTCGCATTCCAATCACATGAACCCAAGAATGGATGACTCA
GCGGTTTTTTGGGCGATGTATTCTACGCGGGGACCCCATCTCTCTCATGC
TTTGGCAGTTCTGGGCCGAGCAGAGCCAGCGGGACGTATCGGCTGGTTTT
TTGTGCATGTAGAACTCGTCAAGTGTCCAAGTGCAATCTCACTTACCCCT
CGATTCCGTCCCAAATTGGATGTATGCGCCAATTGGACTGGCCCGTCAGG
GCAGGCAATGTGGGCAAGTACGCTGGCTCTAGTGAAACGATTACTGCTGC
AGCTTGGCAGCTCGCCAATGGTCCGACCACAAAGCAATTATCTCGAGACG
CGCATCTGACCCTCTTGCACGTCCCACTCATTTTCCGCCGTAGTAGCCCA
CGGTGTTTTACGCTCCACCGGTTGCCTTCGGGGTTCCTCGCCTGTGTACT
GTGCGACAGCCCCCGTCACGTGATAAGCAACAGGTGTTTGCCATAGTCTC
GGGTGAGCGCGACCTAACAAATGTACACAAATTCGTGAACGGCATCGTTG
TTTTGTCCAGGCCTACGGAGCTCCTGGCGCAAGCATGGGCGGCTATGGCG
GGCACGCAGCAGCAGCCGTAGGGGCGGGAGGCATGCGGGCGGAGGGAGTG
GGCGGCCGAGGGGTGGGGGGCGGGGTCGTCGGTGCCATCCTGGAGGACGA
GGAGGACTACGAGAACGAGCCCCCGTTGCTGGAGGAGCTGGGCATCAACT
TCGAGCACATCTGGTCGAAAACGCTCGCGGTGATCTTGCCCACGAAGAAG
ATCGACATCAACTACCTGGTGAGTTCGCGAGTTGTTGTCCGTGGGAGGGT
GGGGTGTTTGAACGCCTGACTTCGGTGATGAGGGAATTCCTTGGTGCGGT
ACCAAATCTCTAGATTGGGAGCATTCTGTGATGTTGCTTTGTGTGGCTCC
TGCTGTCCCGCGCGCGCCAGTGCTGCATGCCTTGGTGTTGCCAAACACCG
CCTGCCTACCGCTGACACATGCGAACGGCAGAAGCGCACGCCCATGTTCT
CTCCACGAAAATTCCAAGCCAAGCACGACGTGTTTTGGTACCGATCCTGG
CAAGTGGCTTTCAAGACCGCGGGTACTGGAAGATCACGTAGAAGGGGCAC
GCGAGATCACCCCCCGTTCAGAGTAACTCGCCCGGGGAAAGGTCCTGTTG
GAGGCCCCCTAGTTGTTCAGAATGCGGTGTCGCGTGAGCCAGCCAGGGCC
AGCTCGTAGCCAGTGGGCGGGAATGGTTTCCGTTTGTTGAGCTGAGGCAT
ATGACTGACCCAACAGTCGACGTGCTGACAGCTCGATGGCGGTATCCATG
ATGAACACCGGCCCCAAAGGTTCCCCTCACGGTCACGGCAAATGCCACTG
AAACACGGACCAGTCGGAAAACTAGTGCCCGGAACGCGCAGATATCTAGG
GCACAATTTTTTGCGACTGTTAGGCAGCAAGCAGAAGTATGGATCGTGCT
TCAGCAGACATGCTCTGACCACGTGATCGGAACAGTGAGTATCTGCTTCG
CCGACATGTGCCGTTTGTTGGTATTGCTCGAGCAGTTGCTTGTGAAGCTC
CCATCGACCACGCTACACAAGGCTCTACTCAGCTGTTGATGTTGCCTCTG
CTGCTGCTGCTGCTGCTGCTGCTGTTTCCTTCCTTCCTGCTGCCATGTGC
GATTCTGGTGTGCCCTACTATTCTTTCTATATATATATCTGACTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCA
CACACACACCACACACGCCACAGGACGACACGGACCTGGCAGGTCCGCTT
GTGTTCTGCTTGTGCTTCGGGCTGTGCCTCCTCTTGACGGGAAAGGTGAG
CGAAGCCAAGAAGATTTGCGGGGACGGCGGGGTTGGTGAAGCGGGGCAGG
TGGACTGGATGCCAACATACGGCGCGTGTGTGTGTGAACAGTACCAGCGG
CGACACCGGCGGTATATTTGATGCTGCTGTTCGAGTGCCAAGCTTCAGCG
TACACCACTCAAGAGCAGCGGCGCGTGCACAGCTGAAATACTCCCGTGCA
TGAAACCAAAGCTCGGATTGCACGTATGCCTATGTAATTGGAAGCCTTGG
ACTTGTGCACGAGGCGTGTATGAAGGGCAGGTGCCTCATGCATCGCCAGG
GGAAGAGTAGCGTCGGATATGTTGGAGAAGAAAGACGACGTACGTACCGC
CGCCGCCGCTAATCAACAGGCACTCCGCAAAGGCCAGGGCTGGCGCTTCA
AAATTTAGCCCGCGTGTGGTACTTGCGTGTGTGTGTGCCCCTGGCGAAAA
GTCTACGTAGGGATTGGTGTTCATCTGCCTCCCCCCCTCTCGCGGTCGTT
GCGGTGTGGTATTATTGTGCGTTACTTGCACACTCCAGCGACTCCTGGAG
GGACGACGGGCGACCCCTGAGTTTTCCCCCCGCAGCGTTTGACTTTGTGC
GATCGACTCCGTGGCACGACGCTCCTACCTGCAGCGCTATCCTATCCCCC
GCGCGCCTTTCTTCAACCTTGCGGAATGGTGTGAGTGATTACGCCTGTTT
TCTTCAACTGCTGCGCTCTCAAGACCTCCTGCTTGCCCAAATCACCCTGC
CTACCGCCTACCGTTGTCTCACGTCACCCGCAGCCACACTTTGGGTACAT
CTATGGGTTCGGAATGTTTGGGTGCATCGCGACGGCGATGGTGCTCAACC
TAATCGGAGAAAAGCCGATTGACCTCTGGAAAACGACAAGGTGTGTGTCC
CAGTTCCTTTTACCCCACTCCGCGCCCATCTTCCTCGCCGGCAGAGAACT
CGTGCTTGCTCCGAAGAACACGCCTCAACCCTGCCAATCGGCATTCGGGG
ATTTTCCTGCTGGTGGATGTCAGGAAGTGGTGCTGGTGTGGCAGGTGTTT
GAGATGTGCGGTAGGCATGATGAAGAACGTGGTAGGCCGTTGTCGTGTCC
GCGCAATGGGCCAAACTGTGGGCGCAGCGCCAGCGGTGAATGAGCTGCTA
ATACTTGCCTTGTTCACTCACATCTTCTTCCATTGTAGCTGTGCGCAAGC
ACAGAGCGGCACTGAGTCCCCCTACCCTAGCGCGGCAGCCACAGCCAACC
TGACCTGAATCCCGCCCCCCCACCCCCTCGGCCTTGTTTGCCATCGGGGT
TGGGTTTTCGTCGCTTGGCAACGACGTTGTAAAACAAGCCCCCCGCTCGG
TGTTTGCCATCGGGATTGGGTTTTCGTCGCTTGGCAACGACGTTGTAAAA
CAAGCCAATTCACTTCGTGAACTCGGCAACCAGGTTACCGTTTTTTTTTT
TACCTCTGTTTTTTTTTTTTGGCGGTAACCGTGAATGGTGGTCGAGTAGA
TCATGTTGTGCGGGGTGGAGAACCCTCACTCCGCGCAAGGGGGATGATCG
CACCACGTTGTGTTAAAATGGTCAAGCATCCTCGAGGAAGTTACACAGTG
CTTACAACTGTCTCTGGAAGTGAAAGCACCAGAAAATAAATTAAGTCATA
CGTAGCTGTCATCCGTACGCAAGGAAGTAAGCACAAGATGCCGAACACCC
TTAGCAGGATGCATCTCACCCTTCATGCGACTCGCCAAATACCTCACGGC
GCTTCGCGCTTGGTGATGTGAGAGCCTGGTCCGGTGAGAACCCGGCGTGC
TCCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGTCTAACGACTACGGC
ATGCACGACTATGAGTACACCCCCCCCCCCCGACATCCCAACCATGCAGT
GTTCTGGGGTACTGCCTCTTGCCGGTCATCGGCTTAGCGGCGATGGGGAT
AGTGACGGACCTGCGTGGGAACTTGGGGCACGTGCTGGGGTTCGTGGCGG
TGGCCTGGTGCACCATTTCGGCCACCCGCTTGTTCGAGGAGTATCTGGAG
ATGCGAAGACAGCGGTATCTCGTGGCCTACCCTGTAGGCCTGCTGTACGC
TTGTTTCGTTCTCATCACGGTGTACTAACCGGGGTATTGCGTCTCTTGTG
CTGGTGTTTTTGTGGGGGATCGATGCGCGCGCACACACATCGCCCTGCTG
GTGTAGTACGTGAAGCACTGCTGTCAAGTGTAACGTTCCGAAGATCGCGC
GCACTTCGTGGTAGATCGAGGTGTTGCCATCATTGTTGTTTCTGTGGTCG
CTGCTGCTGTTCTCGTGTAGCAAGGAACGGATGAGTTGAAATCGGTAGAC
ATGAGGATTTGTTCGGCTATACTCGCCAGGGGTGCTCACTCACCGCTGGC
CCGCAACAATAACAGCCCGGGTCGTGTTTGCAGCAGCAGCACTTTTCGTC
GGCATGGTAAAAGTCCGTCGGGCGGATGTGCACTAGCTCTTGTACCGTCA
GTCCACAAACTTGTGGGAGGTGCCTCACCAGACGAGGGGGGTGGACAGGT
CGGCTTGACACTCCAAGCGGCGGCGCTGTTTCTAGGACTACAGCAGTTCG
CAGAGAAAGCGGTTGTTTCTCAGTTCAGCAACAAAGTGGGTATCGTTGCC
ACGAACGTCCGCTGATTTCGTACACAAGATGTTTGGGCTCTTGTGTTTGG
TTGAGCCTGCCTGCGTACGGCGACTGAGGGCAATACAATGTTGCAGTGTA
GTCGCTCTGAGAATGCATCGTCGGCCTAGAGTGTGTGGTTCTTGGCGTAA
CATAAGTGCGGATATGTGTGTAAATAGGTTTGGGGGGGTCAGTGCGTTGT
ATTAGCCTTGGGCTTGCCTGTCATTCATCGGTGCTTTGTCCGATAGGATT
GTCCGTCTCAAGCGGTGGTGTTACGGTAAAAAAATATCAAGCAATCATGT
TCGGTGTCACACTTGCCCATGTGGTCCACGTTTCAACAAAAGGGATGCCA
ACAACGAAAGATGGGTCTCTGGGCATGGTATTTTGAGCGCCGCACTTTTC
CACGCCCACCTTGCTTACTTTGGAGAACTTTGCACTCAATGAATCAGCCC
GTGGTGTGTGGCGATGTTGTGTGTAACTTACGGTTCAGTTCACGACCAGC
CTCAGCCTGAGTGAAAGCGTTTGTTGTTTTGGCCTTTCAGTTATTATTTT
GCCCTCTTCTTTCACCTAACGGGGACGCCAAAGAACAAAAGTACCACTAA
TGCTCAGCGCCGAGGCTTTAAAGTCCAACATAAGGAGCCACACGTCGAAC
TGGCCAAAACCATCACCGATACCTGAAAGCTTCGCCTTATACTGTACCAA
GAACACTCCCATCTTCGAAAAAAACACGATCACACCATGACATGTAATCG
AGTACATGACTCGACCTCCTCCTCCAAACTAGAAACGTGAAATACAACCC
TCCAAGTGTTGGGGGCGACGACTAATAAACTCTGGCAAGGTTGAATCGTC
CCCGACCAATCCCGTTTCGGCGACGCCTCTTCTTCGTCGCCGCCACCCCC
GAGAGCTGCTTCATCCGAAACGTCACGTAGTCCTGCCCTCGGTGAGCTGC
CTGGTTATACAG
back to top

Coding sequence (CDS) from alignment at chr_00:3403316..3414677-

>Ec-00_003430.2 ID=Ec-00_003430.2|Name=Ec-00_003430.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=942bp|location=Sequence derived from alignment at chr_00:3403316..3414677- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCTACGAGTACTCCCAATATATCTAATAGCCCCCCTACTCGTATGCAT
CGTCATGCTCCGAGAAAAACCAAATTCCTCTTTACCATCTCTCCAAAACA
AACAAAAAAAAACTTTAACACAACAAACACTCCTCCAACCTTCACCAGAC
TCTCTCTTTTCTCTTGTCCAATCTCGTCTCTCTCTCTCTCTCTCCATCAC
AGAATACGAATCGACCCCAAAACACTTCCTTCACTGCAAGTTCATCACAA
AGCCACGGTGCAATGCAAAAGACTCCTTGCTCACGATCATACCCGACAAT
CTACCAACTATAATCTACGTAGATCCATGCTCCATTATTCAACCATCAGC
TACATTATTTCCTTCCGAAAGAACATCGTGCCCCCCTGATCTGGGAGATC
CACCACCTGCCTTTAGAAGGGTCGGAGTCAGAACCAAAGACCAAAAGAAC
AACAACATTCGAAATTCATCCAGTCGAAAACTCATGGAAAAACAATCCTC
CAGCATCGCAAATTCCAAGACAAAAATCCAATCCAACACCAAAACCCAAA
CCCAAACCAATACCAAACAAATCCTTTCAAAACTCAAACTCCTACATTTG
CCGGCCCATCAACCCCGGCGCTTTCATCCATTCCTCCTGCCACTGCTTCT
TCCCCGCGGTAGCCACCCTCGCCTCTGCCGCGGGCACCCTTTTCTGCTGG
CATTGCCGCGGCTCGGGCTTCATCAGGTGTCACGTATCCGTCTGGATGGG
GTGTGTACAGCTGTCTCTCCGGAGGGATTGACTCGACAGTGCAGGGGAGA
TTGCGCATTCGAAAGGGGAAGGCAAAGGCAAAATCAGTCACCCAAAGCGT
CAATTCAGCACGTGGCACTGCTGGGGAGAATACCTTGCAATACGCCCCCT
GTTCTGCGCAGCAGTGATTGTTGTCTTTCGCATTCTATATGA
back to top
Synonyms
The feature 'Ec-00_003430.2' has the following synonyms
Synonym
Esi0217_0023
Esi_0217_0023