Ec-00_003260.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR
|
Overview
Homology
BLAST of Ec-00_003260.1 vs. uniprot
Match: D7FRN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN8_ECTSI) HSP 1 Score: 2003 bits (5188), Expect = 0.000e+0 Identity = 1170/1170 (100.00%), Postives = 1170/1170 (100.00%), Query Frame = 1
Query: 1 MSALIATAGEGPAGPGRAAQAAAALRRNAVAALGELLFYIVTQEPVGTGGXXXGMETERWNIPVAAVAGVIGKCLLVVDDAXXXXXXXXXXXRLAGHEGARHYAAKTMENVLAQVGPSHPLVPALVTPELALGLLDLARHASSENLRRTATAALYHVFGHDILGGEFSQDRGDDDXXXEIEASRGIGSESAGRGARRGTGRRRSDRAGDDVPAAGCVASRVMREPGAPEFIVQGLSAEGSSATSRRAFLGMFNLVVWASGNCGGGRSVGGRGPEDDEFAGGGRRNAPLFLRRAVECMLDSQHLLLRLLRVAEHGEGAVLRAKGFLSLRLALEEAADPGFLLKACRSRLLPLLARAIGGLAPRSAPRGPAEPASASAAGIPELSPQQEYLYECSTLLAEWLCAVPETAARRLATELLQRRGVSAGGDGVSATTARDGCDATGRWGRQPDRSGGHRSGGGAPPRRFGARQQASAAGTAELEAAMGMFQAVVHLVNSPLLRERAVTRPFVSDVAGCLALSCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGSVVLAALLPTVETLAQQAELVLVPHRGVVSAELIPVLCRFLRSPSGDTRALVVAIFRVLLPPLVRPQXXXXXXXXXXXXXXXXXXXXXXLGGPAETAGWRPSSSSSSPSPVAAEDLVRSAFADHLLPHAPSLLGDHDPIPQYTIRLLLDVGRAWGGLGMALLCSGRDDAAAAAPVAAALLDRLSGTPLPAALSPRGGTRTGHEPPGDAAAVTTLDPALACLLSLLVDDGAGTTGAGPGRGLPSDRRHRQHVAGTVHYDGDDSYHGGENDDVFVALLGLELPRRTAAAVAAAVKAGAPEVADACLGLAVALLDAGARRKAAAEALLGPVSGTERAAAASTCRGAGTGAAAVTAGEQWEEQQLRPLLAAVPLAVETVNLFCVQGALAEKRREHQLAGAPVRGREGPGGALGGVDDGVRSGVSDSATLFLEMCYKMFGESLLRSLLLTYTIRPTSSVSGGEPLPSLASGHAAAAAAAAPQARVFRQLADFLACPAEDERPRIRILRLLLSAVSTLGQPFYGTLRRGPLWTALLRLATGRGIGSGREAVLVAGVGGSGARTALGATSALARDVVAAVREDRGYNGPVAGAEPRGWSGRSGSSRGERR 3510
MSALIATAGEGPAGPGRAAQAAAALRRNAVAALGELLFYIVTQEPVGTGGXXXGMETERWNIPVAAVAGVIGKCLLVVDDAXXXXXXXXXXXRLAGHEGARHYAAKTMENVLAQVGPSHPLVPALVTPELALGLLDLARHASSENLRRTATAALYHVFGHDILGGEFSQDRGDDDXXXEIEASRGIGSESAGRGARRGTGRRRSDRAGDDVPAAGCVASRVMREPGAPEFIVQGLSAEGSSATSRRAFLGMFNLVVWASGNCGGGRSVGGRGPEDDEFAGGGRRNAPLFLRRAVECMLDSQHLLLRLLRVAEHGEGAVLRAKGFLSLRLALEEAADPGFLLKACRSRLLPLLARAIGGLAPRSAPRGPAEPASASAAGIPELSPQQEYLYECSTLLAEWLCAVPETAARRLATELLQRRGVSAGGDGVSATTARDGCDATGRWGRQPDRSGGHRSGGGAPPRRFGARQQASAAGTAELEAAMGMFQAVVHLVNSPLLRERAVTRPFVSDVAGCLALSCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGSVVLAALLPTVETLAQQAELVLVPHRGVVSAELIPVLCRFLRSPSGDTRALVVAIFRVLLPPLVRPQXXXXXXXXXXXXXXXXXXXXXXLGGPAETAGWRPSSSSSSPSPVAAEDLVRSAFADHLLPHAPSLLGDHDPIPQYTIRLLLDVGRAWGGLGMALLCSGRDDAAAAAPVAAALLDRLSGTPLPAALSPRGGTRTGHEPPGDAAAVTTLDPALACLLSLLVDDGAGTTGAGPGRGLPSDRRHRQHVAGTVHYDGDDSYHGGENDDVFVALLGLELPRRTAAAVAAAVKAGAPEVADACLGLAVALLDAGARRKAAAEALLGPVSGTERAAAASTCRGAGTGAAAVTAGEQWEEQQLRPLLAAVPLAVETVNLFCVQGALAEKRREHQLAGAPVRGREGPGGALGGVDDGVRSGVSDSATLFLEMCYKMFGESLLRSLLLTYTIRPTSSVSGGEPLPSLASGHAAAAAAAAPQARVFRQLADFLACPAEDERPRIRILRLLLSAVSTLGQPFYGTLRRGPLWTALLRLATGRGIGSGREAVLVAGVGGSGARTALGATSALARDVVAAVREDRGYNGPVAGAEPRGWSGRSGSSRGERR
Sbjct: 1 MSALIATAGEGPAGPGRAAQAAAALRRNAVAALGELLFYIVTQEPVGTGGXXXGMETERWNIPVAAVAGVIGKCLLVVDDAXXXXXXXXXXXRLAGHEGARHYAAKTMENVLAQVGPSHPLVPALVTPELALGLLDLARHASSENLRRTATAALYHVFGHDILGGEFSQDRGDDDXXXEIEASRGIGSESAGRGARRGTGRRRSDRAGDDVPAAGCVASRVMREPGAPEFIVQGLSAEGSSATSRRAFLGMFNLVVWASGNCGGGRSVGGRGPEDDEFAGGGRRNAPLFLRRAVECMLDSQHLLLRLLRVAEHGEGAVLRAKGFLSLRLALEEAADPGFLLKACRSRLLPLLARAIGGLAPRSAPRGPAEPASASAAGIPELSPQQEYLYECSTLLAEWLCAVPETAARRLATELLQRRGVSAGGDGVSATTARDGCDATGRWGRQPDRSGGHRSGGGAPPRRFGARQQASAAGTAELEAAMGMFQAVVHLVNSPLLRERAVTRPFVSDVAGCLALSCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGSVVLAALLPTVETLAQQAELVLVPHRGVVSAELIPVLCRFLRSPSGDTRALVVAIFRVLLPPLVRPQXXXXXXXXXXXXXXXXXXXXXXLGGPAETAGWRPSSSSSSPSPVAAEDLVRSAFADHLLPHAPSLLGDHDPIPQYTIRLLLDVGRAWGGLGMALLCSGRDDAAAAAPVAAALLDRLSGTPLPAALSPRGGTRTGHEPPGDAAAVTTLDPALACLLSLLVDDGAGTTGAGPGRGLPSDRRHRQHVAGTVHYDGDDSYHGGENDDVFVALLGLELPRRTAAAVAAAVKAGAPEVADACLGLAVALLDAGARRKAAAEALLGPVSGTERAAAASTCRGAGTGAAAVTAGEQWEEQQLRPLLAAVPLAVETVNLFCVQGALAEKRREHQLAGAPVRGREGPGGALGGVDDGVRSGVSDSATLFLEMCYKMFGESLLRSLLLTYTIRPTSSVSGGEPLPSLASGHAAAAAAAAPQARVFRQLADFLACPAEDERPRIRILRLLLSAVSTLGQPFYGTLRRGPLWTALLRLATGRGIGSGREAVLVAGVGGSGARTALGATSALARDVVAAVREDRGYNGPVAGAEPRGWSGRSGSSRGERR 1170
BLAST of Ec-00_003260.1 vs. uniprot
Match: A0A6H5JTL8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL8_9PHAE) HSP 1 Score: 1694 bits (4388), Expect = 0.000e+0 Identity = 1007/1197 (84.13%), Postives = 1025/1197 (85.63%), Query Frame = 1
Query: 1 MSALIATAGEGPAGPGRAAQAAAALRRNAVAALGELLFYIVTQEPVGTGGXXX-GMETERWNIPVAAVAGVIGKCLLVVDDAXXXXXXXXXXX-------RLAGHEGARHYAAKTMENVLAQVGPSHPLVPALVTPELALGLLDLARHASSENLRRTATAALYHVFGHDILGGEFSQDRGDDDXXX--------EIEASRGIGSESAGRGARRGTGRRRSDRAGDDVPAAGCVASRVMREPGAPEFIVQGLSAEGSSATSRRAFLGMFNLVVWASGNCGGGRSVGGRGPEDDEFAGGGRRNAPLFLRRAVECMLDSQHLLLRLLRVAEHGEGAVLRAKGFLSLRLALEEAADPGFLLKACRSRLLPLLARAIGGLAPRSAPRGPAEPASASAAGIPELSPQQEYLYECSTLLAEWLCAVPETAARRLATELLQRRGVSAGGDGVSATTARDGCDATGRWGRQPDRSGGHRSGGGAPPRRFGARQQASAAGTAELEAAMGMFQAVVHLVNSPLLRERAVTRPFVSDVAGCLALSCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGSVV--------LAALLPTVETLAQQAELVLVPHRGVVSAELIPVLCRFLRSPSGDTRALVVAIFRVLLPPLVRPQXXXXXXXXXXXXXXXXXXXXXXLGGPAETAGWRPSSSSSSPSPVAAEDLVRSAFADHLLPHAPSLLGDHDPIPQYTIRLLLDVGRAWGGLGMALLCSGRDDAAAAAPVAAALLDRLSGTPLPAALSPRGGTRTGHEPPGDAAAVTTLDPALACLLSLLVDDGAGTTGAGPGRGLPSDRRHRQHVAGTVHYDGDDSYHGGENDDVFVALLGLELPRRTAAAVAAAVKAGAPEVADACLGLAVALLDAGARRKAAAEALLGPVSGTERAAAAST---CRGAGTGAAAVTAGEQWEEQQLRPLLAAVPLAVETVNLFCVQGALAEKRREHQLAGAPVRGREGPGGALGGVDDGVRSGVSDSATLFLEMCYKMFGESLLRSLLLTYTIRPTSSVSGGEPLPSLASGHAAAAAAAAPQARVFRQLADFLACPAEDERPRIRILRLLLSAVSTLGQPFYGTLRRGPLWTALLRLATGRGIGSGREAVLVAGVGGSGARTALGATSALARDVVAAVREDRGYNGPVAGAEPRGWSGRSGSSRGERR 3510
MSALIATAGEGPAGPGRAAQAAAALRRNAVAALGELLFYIVTQEPVGTGG GMETERWNIPVAAVAGVIGKCLLVVDDA XXXXXXXXXX RLAGH+GARHYAAKTMENVLAQVGPSHPLVPALVTPELALGLLDLARHASSENLR TA AALYHVFGHDILGGEF QD D XXX EIEASR IG ESAGR RRSDRAGDDVPAAG VASRVMREPGAPEFIVQGLSAEGS TSRRAFLGMFNLVVWASGNCGG R+VGG G ED+EFAG GRRNAPLFLRRAVECMLDSQHLLLRLLRVAEHGE VLRAKGFLSLRLALEEAADPGFLLKACRSRLLPLLARAIGGLAPRSAPR PA A+AAG+PELSPQQEYLYECSTLLAEWLCA+PE AARRLATEL QRRGVSA GDGVSATTARDGCDA RWGRQ +RSGG+RSG GAPPRRFG QQA+AAGTAELEAAMGMF AVVHLVNSPLLRERAVTR FVSDVAGCLALSCP XXXX X LAALLPTVETLAQQAELVLVPHR VVSAELIPVLC FLRSPSGDTRALVVAI RVLLPPLVRPQXXXXXXXXXXXXXXXXXXXXXX AAEDLVRSAFADHLLPHAPSLLGDHDPIPQYTIRLLLDVGRAWGGLG ALLCSGRDD AAAA VA ALLDRLSGTPLP ALSP GGTRTGHEPPGDAAAVTTLDPALACLLSLLVDDGAGTTGAGPGRGLPSDRR RQ VA T HYD DDSYHGGENDDVFVALL LELPRRTAAAVAAAVKAGAPE ADACLGLAVALLDAGARRKAAAEALLGPVSGTERAAAA+T CRGAG GAAAVTAGEQWEEQQLRPLLAAVPL VE V+LFCVQG LAEKRREHQL GAPVRGREGPG ALGGVDDGVRSGVSDSATLFLE+CYKMFGE LLRSLLLT +RPTSS+SGGEPLPSLASGHAAAAAAAAPQARV RQLADFLACPAEDERPRIR+LRLLL+AVSTLGQPF GTLRRGPLWTALLR+ATGRG+GSGREAVLV GV GSGARTALGATSALARDVVAAVRE RGYNGPVAG EPRGWSGRSGSSRGERR
Sbjct: 1394 MSALIATAGEGPAGPGRAAQAAAALRRNAVAALGELLFYIVTQEPVGTGGGGGSGMETERWNIPVAAVAGVIGKCLLVVDDASXXXXXXXXXXXXXXXXXRLAGHQGARHYAAKTMENVLAQVGPSHPLVPALVTPELALGLLDLARHASSENLRCTAAAALYHVFGHDILGGEFCQDCDDXXXXXXXXXXXXXEIEASRSIGGESAGRXXXXXXXXRRSDRAGDDVPAAGRVASRVMREPGAPEFIVQGLSAEGSFTTSRRAFLGMFNLVVWASGNCGGDRAVGGGGTEDEEFAGQGRRNAPLFLRRAVECMLDSQHLLLRLLRVAEHGEDTVLRAKGFLSLRLALEEAADPGFLLKACRSRLLPLLARAIGGLAPRSAPRCPA----AAAAGMPELSPQQEYLYECSTLLAEWLCAIPERAARRLATELRQRRGVSAEGDGVSATTARDGCDAKRRWGRQSERSGGYRSGVGAPPRRFGPGQQAAAAGTAELEAAMGMFPAVVHLVNSPLLRERAVTRSFVSDVAGCLALSCPALGLAAAGTGRGNGXXXXSSGRSGRSSCRRAVSPAAGGPWSGDGXXXXXXXXXXXXXXXLAALLPTVETLAQQAELVLVPHRDVVSAELIPVLCLFLRSPSGDTRALVVAILRVLLPPLVRPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XAAEDLVRSAFADHLLPHAPSLLGDHDPIPQYTIRLLLDVGRAWGGLGTALLCSGRDDPAAAA-VAPALLDRLSGTPLPVALSPMGGTRTGHEPPGDAAAVTTLDPALACLLSLLVDDGAGTTGAGPGRGLPSDRRSRQRVADTGHYDSDDSYHGGENDDVFVALLALELPRRTAAAVAAAVKAGAPEAADACLGLAVALLDAGARRKAAAEALLGPVSGTERAAAAATAYTCRGAGAGAAAVTAGEQWEEQQLRPLLAAVPLTVEAVSLFCVQGTLAEKRREHQLTGAPVRGREGPGRALGGVDDGVRSGVSDSATLFLEVCYKMFGECLLRSLLLTGPVRPTSSISGGEPLPSLASGHAAAAAAAAPQARVIRQLADFLACPAEDERPRIRVLRLLLNAVSTLGQPFCGTLRRGPLWTALLRMATGRGMGSGREAVLVVGVSGSGARTALGATSALARDVVAAVREKRGYNGPVAGTEPRGWSGRSGSSRGERR 2581
BLAST of Ec-00_003260.1 vs. uniprot
Match: A0A7S2R5C0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C0_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 4.800e-13 Identity = 180/740 (24.32%), Postives = 252/740 (34.05%), Query Frame = 1
Query: 73 LRRNAVAALGELLFYIVT------QEPVGTGGXXXGMETERWNIPVAAVAGVIGKCLLVVDDAXXXXXXXXXXXRLAGHEGARHYAAKTMENVLAQVGPSHPLVPALVTPELALGLLDLARHASSEN------------LRRTATAALYHVFG------HDILGGEFSQDRGDDDXXXEIEASRGIGSESAGRGARRGTGRRRSDRAGDDVPAAGCVASRVMREPGAPEFIVQGLSAEGSSATSRR---AFLGMFNLVVWASGNCGGGRSVGGRGPEDDEFAGGGRRNAP-----------LFLRRAVECM---LDSQHLLLRLLRVAEHGEGAVLRAKGFLSLRLALEEAADPGFLLKACRSRLLPLLARAIGGLAPRSAPRGPAEPASASAAGIPELSPQQEYLYECSTLLAEWLCAVPETAARRLATELLQRRGVSAGGDGVSATTARDGCDATGRWGRQPDRSGGHRSGGGAPPRRFGARQQASAAGTAELEAAMGMFQAVVHLVNSPLLRERAV--TRPFVSDVAGCLALSCPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGSVVLAALLPTVETLAQQAELVLVPHRGVVSAELIPVLCRFLRSPSGDTRALVVAIFRVLLPPLVRPQXXXXXXXXXXXXXXXXXXXXXXLGGPAETAGWRPSSSSSSPSPVAAEDLVRSAFADHLLPHAPSLLGDHDPIPQYTIRLLLDVGRAW 2163
+RR A+A LGELLFYI + EP GG T W +P A V+ V +CLL +D E HYAAKT+EN+LAQ + T E+A+ LLD+A +S + LR TA AL H+F H + G E + D + AS G TG + + +RV+ G PE I + + S + AFL M N V+W G+ GRG +D G G +P F R V + LD QH ++ +G +L A LSLR P L+ L+ L R + + G+ E + YL + L +LC T LA + Q +A R+ R G AP R S G A + A+VHLV S LL A+ + D++ C+ + S + LL V+ LA+ AE L P +++ L P +CR L SGD R V + R LLP ++ T G ++ + + LLP P L+ D DPIPQ+T+ LLLD+ AW
Sbjct: 242 IRRRAMATLGELLFYISSLEEGEEDEPSNGGGEARPAST--WTMPAATVSAV-ARCLLEGED-----------------ETVCHYAAKTIENILAQAPGVY--CRRFATEEVAVRLLDIATRGASPSSTASARSGADGSLRTTAACALSHLFRFLLVSPHTLPGPEAAA-AALTDPEDSLSASLGT------------TGPK--------------LVARVLGR-GGPEPICRVIEGGVVGVVSEKMQLAFLNMLNCVLWEPGD------GYGRGSGEDPILGLGADASPTTRALQPVREQFFSSRVVTSLVKSLDRQH--------SDLAKGKILLAIQLLSLR-------HPQALVDVLERNLIHRLDRIV------------------AEQGLSE----RRYLRLSTLSLLGFLCRCVGTIPMALAQRIEQLAATQGNSPNSAAEAHRE------------------RDAGAAPAR-------PSLGGLFPDRAVLAAVPALVHLVQSRLLIRAALGLAPSLLQDLSLCVTAT--------VLPLNPTDGQAVLLDDTWVLLEEGKKRDPGSRRRGSGSRSIRPWLQTTLLLVVQGLARHAETELSPFSDKMASCLSPAVCRLLIDTSGDIRTQAVTLLRYLLPAVI-------------------------------TTGVNQGNN---------HITISTTILHDLLPRCPDLVADRDPIPQFTLALLLDLAEAW 815
BLAST of Ec-00_003260.1 vs. uniprot
Match: A0A7S3CGV7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CGV7_9CHLO) HSP 1 Score: 65.1 bits (157), Expect = 8.460e-7 Identity = 48/134 (35.82%), Postives = 71/134 (52.99%), Query Frame = 1
Query: 73 LRRNAVAALGELLFYIVTQEPVGTGGXXXGMETERWNIPVAAVAGVIGKCLLVVDDAXXXXXXXXXXXRLAGHEGARHYAAKTMENVLAQVGPSHPLVPALVTPELALGLLDLARHASSENLRRTATAALYHVF 474
+RR ++AALGELLFYIVTQE G GM W IP + ++ + L V+D +HYA KT+EN+ + +G + L L T E AL L+ + HA SE+++ TA++AL ++
Sbjct: 212 VRRKSMAALGELLFYIVTQEQEAEEG---GMGRPSWYIPNGTITTIV-RLLRNVEDPV-----------------TQHYAVKTLENIFS-IGGAWAL--RLGTHETALSLVHICTHAKSEHVKVTASSALARLY 321
BLAST of Ec-00_003260.1 vs. uniprot
Match: A0A0G4IQG6_PLABS (Protein kinase domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IQG6_PLABS) HSP 1 Score: 63.9 bits (154), Expect = 2.250e-6 Identity = 51/141 (36.17%), Postives = 64/141 (45.39%), Query Frame = 1
Query: 67 AALRRNAVAALGELLFYIVTQEP---VGTGGXXXGM------ETERWNIPVAAVAGVIGKCLLVVDDAXXXXXXXXXXXRLAGHEGARHYAAKTMENVLAQVGPSHPLVPALVTPELALGLLDLARHASSENLRRTATAAL 462
A +RR+AVA LGELLFY+ TQEP V G E W IP A+ VI R RHYAAKT+ENV AQ S + TPE+ L L+ + + + + LR T+ AAL
Sbjct: 548 AKIRRHAVATLGELLFYVATQEPNAQVNAPGAPSSDVAPRRDENNNWAIPACAIGTVI------------------RGLRAGEDNVVRHYAAKTIENVAAQSPGS--AIEWFATPEIVLALVQIFQSTTHKALRVTSAAAL 668
BLAST of Ec-00_003260.1 vs. uniprot
Match: A0A7S2BSE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE0_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 5.860e-5 Identity = 48/138 (34.78%), Postives = 63/138 (45.65%), Query Frame = 1
Query: 76 RRNAVAALGELLFYIVTQEPVGTGGXXXGMETERWNIPVAAVAGVIGKCLLVVDDAXXXXXXXXXXXRLAGHEGARHYAAKTMENVLAQVGPSHPLVPALVTPELALGLLDLARHASSENLRRTATAALYHVFGHDIL 489
RR A AALGELLFYI TQE T +++ W++P A VI +CL D+ HYAAKT++N+LAQ S + PE+ L+ LA TA AAL H+ +L
Sbjct: 223 RRRATAALGELLFYIATQEDEVT------PQSKPWSLPSECGA-VIRRCLEDEDEVVC------------------HYAAKTLQNILAQA--SFDRCRFVAAPEIGKSLVHLAATRPEAPAAMTAVAALGHLLRQLLL 333
BLAST of Ec-00_003260.1 vs. uniprot
Match: A0A5B8MMC6_9CHLO (Serine/threonine protein kinase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MMC6_9CHLO) HSP 1 Score: 58.9 bits (141), Expect = 7.620e-5 Identity = 45/134 (33.58%), Postives = 69/134 (51.49%), Query Frame = 1
Query: 73 LRRNAVAALGELLFYIVTQEPVGTGGXXXGMETERWNIPVAAVAGVIGKCLLVVDDAXXXXXXXXXXXRLAGHEGARHYAAKTMENVLAQVGPSHPLVPALVTPELALGLLDLARHASSENLRRTATAALYHVF 474
+RR ++AALGELLFY+VTQE T G + W +P + I + L V+D +HYA KT+EN+ + +G L L T E AL L+ + +A SE+++ TA++AL ++
Sbjct: 616 VRRKSMAALGELLFYVVTQEQEETEGES---QKPAWYVPNGTIT-TIFRLLRNVEDPV-----------------TQHYAVKTLENIFS-IGGEWAL--RLGTSETALSLVHICLNAKSEHVKVTASSALARLY 725 The following BLAST results are available for this feature:
BLAST of Ec-00_003260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-00_003260.1 ID=Ec-00_003260.1|Name=Ec-00_003260.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1171bpback to top spliced messenger RNA >Ec-00_003260.1 ID=Ec-00_003260.1|Name=Ec-00_003260.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3755bp|location=Sequence derived from alignment at chr_00:3271409..3276610+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon. ATGTCCGCGCTGATCGCAACGGCGGGCGAGGGGCCGGCCGGCCCCGGCCGback to top protein sequence of Ec-00_003260.1 >Ec-00_003260.1 ID=Ec-00_003260.1|Name=Ec-00_003260.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=1171bp MSALIATAGEGPAGPGRAAQAAAALRRNAVAALGELLFYIVTQEPVGTGGback to top mRNA from alignment at chr_00:3271409..3276610+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Ec-00_003260.1 ID=Ec-00_003260.1|Name=Ec-00_003260.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5202bp|location=Sequence derived from alignment at chr_00:3271409..3276610+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Coding sequence (CDS) from alignment at chr_00:3271409..3276610+ >Ec-00_003260.1 ID=Ec-00_003260.1|Name=Ec-00_003260.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=3513bp|location=Sequence derived from alignment at chr_00:3271409..3276610+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)back to top Synonyms
The feature 'Ec-00_003260.1' has the following synonyms
|