Ec-00_002540.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_002540.1
Unique NameEc-00_002540.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length203
Homology
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BLAST of Ec-00_002540.1 vs. uniprot
Match: D7FL81_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL81_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 3.220e-135
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1 
Query:    1 MDCAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXASIVSDDYEVIGCVADNQAARVMPVGPLAEDTMSAEVG 606
            MDCAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXASIVSDDYEVIGCVADNQAARVMPVGPLAEDTMSAEVG
Sbjct:    1 MDCAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXASIVSDDYEVIGCVADNQAARVMPVGPLAEDTMSAEVG 202
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BLAST of Ec-00_002540.1 vs. uniprot
Match: A0A6H5K566_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K566_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 6.670e-86
Identity = 144/189 (76.19%), Postives = 147/189 (77.78%), Query Frame = 1 
Query:    7 CAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWC-----TGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXASIVSDDYEVIGCVADNQAARV 558
            CAGN  ETCGGFDALTLYEI SEAPPTPAP TPPG      SPVVPSGDYDFV CVADSQSSRVMPVGPLAE VMSAEICFGICSAQDDS THFGTQYGEE          +  T ETS+AC   CAGN  E CGGFDALS+YEIVAD  SPPT APTLP       ASIVSDDYEVIGCVADNQAARV
Sbjct:  422 CAGNAGETCGGFDALTLYEIISEAPPTPAPLTPPGPMPAPASPVVPSGDYDFVDCVADSQSSRVMPVGPLAEAVMSAEICFGICSAQDDSYTHFGTQYGEEDLSGQPRPPPTAPTXETSTACVYPCAGNPEEICGGFDALSVYEIVADIPSPPTTAPTLPAPRTPAPASIVSDDYEVIGCVADNQAARV 610
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BLAST of Ec-00_002540.1 vs. uniprot
Match: D7G5F7_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F7_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 1.330e-67
Identity = 119/202 (58.91%), Postives = 143/202 (70.79%), Query Frame = 1 
Query:    7 CAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXASIV--SDDYEVIGCVADNQAARVMPVGPLAEDTMSAEVG 606
            C+G++   CG  D +++Y +           T  G       PV      +F+GCVADSQ  RVM  GP++ D MSAEIC GICS  D S THFGTQYG ECWCTGSLG+TETS+ACTMDCAGN+AETCGGFDAL++YEIV++  +PPTPAP  P  XXXXX S V  S DY+ +GCVAD+Q++RVMPVGPL ED MSAEVG
Sbjct:   89 CSGDSRVLCGTDDHISVYSLDGS--------TGGGDDDSGDPPV----GSEFIGCVADSQDDRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSE--APPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLTEDVMSAEVG 276
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BLAST of Ec-00_002540.1 vs. uniprot
Match: A0A6H5JNN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN6_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 4.170e-37
Identity = 103/203 (50.74%), Postives = 128/203 (63.05%), Query Frame = 1 
Query:    4 DCAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSP---PTPAPTLPVXXXXXXASIV-SDDYEVIGCVADNQAARVMPVGPLAEDTMSAE 600
            DCAGN  E C GF+A+++YEIAS    +P  + P  XXXXXX  VVPS D + VGCVAD   +RVMPVGPL+ + M+AE         DD                GSLG T++S+AC  DCAGN+ E C GF+A+S+YEI + T+SP   PT       XXXXXX  +V SDDYE+IG VAD   ARVMPVGPL+ + M+AE
Sbjct:  332 DCAGNAEEICSGFNAMSVYEIASVTT-SPTDY-PTXXXXXXXXXVVPSDDSELVGCVADFNGARVMPVGPLSSNAMTAE---------DDDG--------------GSLGATQSSTACDYDCAGNADEICSGFNAMSVYEIASVTTSPADDPTXXXXXXXXXXXXXXXVVPSDDYELIGYVADFNGARVMPVGPLSSNAMTAE 509
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BLAST of Ec-00_002540.1 vs. uniprot
Match: A0A6H5K6V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6V8_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 5.060e-37
Identity = 73/135 (54.07%), Postives = 86/135 (63.70%), Query Frame = 1 
Query:    7 CAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDAL 411
            C+G++   CG  D +++Y +           T  G       PV      + +GCVADSQ  RVM  GP++   MSAEIC GICS  D S THFGTQYGEECWCTGSLGTTETS+ACT  CAGN+ ETCGGFDAL
Sbjct:  314 CSGDSRVLCGTDDHISVYSLDGS--------TGGGDDDSGDPPV----GSELIGCVADSQDDRVMSEGPMSAATMSAEICLGICSEMDSSYTHFGTQYGEECWCTGSLGTTETSTACTYPCAGNAGETCGGFDAL 436
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BLAST of Ec-00_002540.1 vs. uniprot
Match: A0A6H5KQ76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ76_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 3.280e-31
Identity = 66/152 (43.42%), Postives = 82/152 (53.95%), Query Frame = 1 
Query:  148 GDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXASIVSDDYEVIGCVADNQAARVMPVGPLAEDTMSAEV 603
            GDY+ +GC  D + +RVM VGP+  D MSAEICF IC     ++THFGTQYG EC+CT  LG +  S+ CT DC GN  ETCGGFD ++ Y I     S                     D Y  IGC+AD    R+M    +    MSAE+
Sbjct:  304 GDYELIGCRVDDREARVMSVGPIEGDAMSAEICFDICRELHPTSTHFGTQYGNECFCTDVLGESAVSTDCTYDCIGNPDETCGGFDRITAYRIAGSEPS-------------------AGDGYVSIGCLADKNGDRIMDRRMVTSIPMSAEI 436
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BLAST of Ec-00_002540.1 vs. uniprot
Match: D7FMV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV1_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 2.010e-29
Identity = 69/199 (34.67%), Postives = 92/199 (46.23%), Query Frame = 1 
Query:    7 CAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXASIVSDDYEVIGCVADNQAARVMPVGPLAEDTMSAEV 603
            C+G +   CG    +++Y +                     S     GDY+ +GC  D + +RVM  GP+  D MSAEICF IC     ++THFGTQYG EC+CT  L  +  S+ CT +C GN  ETCGGFD ++ Y I     S                     D Y  IGC+AD    R+M    +    MSAE+
Sbjct:  326 CSGESTVLCGTDTHMSVYSLNE---------------GREVSETSDDGDYELIGCRVDDREARVMSAGPIEGDAMSAEICFDICRELHPTSTHFGTQYGNECFCTDVLRESAVSTGCTYECRGNPDETCGGFDMITAYRIAGSEPS-------------------AGDGYVSIGCLADKNGDRIMDGRMVTSIPMSAEI 490
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BLAST of Ec-00_002540.1 vs. uniprot
Match: A0A6H5K223_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K223_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 8.170e-26
Identity = 56/139 (40.29%), Postives = 79/139 (56.83%), Query Frame = 1 
Query:    7 CAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWCTGS-LGTTETSSACTMDCAGNSAETCGGFDALSMY 420
            C+G+  ETCGGF+A+++Y   S+   TP P             V+   D  ++GC  DSQ+ R+ PV   A DVM+   C   C+       ++GTQYGEECWC  S   T   S+ C  DC+G++ ETCGGF+A+S+Y
Sbjct:   42 CSGDAGETCGGFNAMSVYSTGSDPVETPTPVA-----------VIEPTDPTYLGCYVDSQTDRIFPV-TTASDVMTLAFCADFCAEY----AYYGTQYGEECWCGNSGYDTLGESTDCNYDCSGDADETCGGFNAMSVY 164
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BLAST of Ec-00_002540.1 vs. uniprot
Match: A0A6H5K384_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K384_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 3.030e-24
Identity = 58/70 (82.86%), Postives = 59/70 (84.29%), Query Frame = 1 
Query:    7 CAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPL 216
            CAGN  ETCGGFDALTLYEI SEAPPTPAP TPPGXXXXXX PVVPSGDYDFV CVADSQS RV   G +
Sbjct:  407 CAGNAGETCGGFDALTLYEIISEAPPTPAPLTPPGXXXXXXXPVVPSGDYDFVDCVADSQSPRVRQRGEI 476
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BLAST of Ec-00_002540.1 vs. uniprot
Match: A0A6H5KUX7_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUX7_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.740e-20
Identity = 68/174 (39.08%), Postives = 80/174 (45.98%), Query Frame = 1 
Query:  151 DYDFVGCVADSQSSRVMPVGPLAEDVMSA---------------------EICFGICSAQDDSNTHFGTQYGEECWC-----TGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXASIVSDDYEVIGCVADNQAARVMPVGPLAEDTMS 594
            DY  VGC ADSQS R+M     +EDVMSA                     +ICF +C+  D +NTHFGTQYGEECWC         G  +  S C   CAGN  ETCGGFD +++Y+I A      T                   DYE  GC  D    R MP  PL  D M+
Sbjct:   21 DYVLVGCYADSQSGRIM-FNKQSEDVMSASVSCTVLLLRTLAFWIGAWRAQICFDLCN--DGTNTHFGTQYGEECWCGIHPALARHGELDIDS-CDFPCAGNEEETCGGFDKMTVYDIQAVNGGTGT-------------------DYE--GCFRD-ALPRAMPGDPLVFDAMT 168
The following BLAST results are available for this feature:
BLAST of Ec-00_002540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL81_ECTSI3.220e-135100.00WSC domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K566_9PHAE6.670e-8676.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5F7_ECTSI1.330e-6758.91WSC domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JNN6_9PHAE4.170e-3750.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6V8_9PHAE5.060e-3754.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQ76_9PHAE3.280e-3143.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMV1_ECTSI2.010e-2934.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K223_9PHAE8.170e-2640.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K384_9PHAE3.030e-2482.86WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KUX7_9PHAE1.740e-2039.08WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2757239..2759386 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score113.2
Seed ortholog evalue1.4e-22
Seed eggNOG ortholog2880.D7FRS1
Length609
KEGG koko:K22017
Hectar predicted targeting categoryother localisation
Gene idEc-00_002540.1
EggNOG free text desc.Sushi, nidogen and EGF-like
EggNOG OGsKOG4157@1,KOG4157@2759,KOG4291@1,KOG4291@2759
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_002540Ec-00_002540Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 2757239..2759386 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002540.1Ec-00_002540.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 2757239..2759386 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002540.1.5Ec-00_002540.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2757239..2757292 -
Ec-00_002540.1.4Ec-00_002540.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2757755..2758000 -
Ec-00_002540.1.3Ec-00_002540.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2758355..2758423 -
Ec-00_002540.1.2Ec-00_002540.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2758639..2758683 -
Ec-00_002540.1.1Ec-00_002540.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2759192..2759386 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002540.1CDS:Ec-00_002540.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 2757239..2757292 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_002540.1 ID=Ec-00_002540.1|Name=Ec-00_002540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=203bp
MDCAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGPTPAPASPVVPSG
DYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQY
GEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPP
TPAPTLPVPPTPAPASIVSDDYEVIGCVADNQAARVMPVGPLAEDTMSAE
VG*
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spliced messenger RNA

>Ec-00_002540.1 ID=Ec-00_002540.1|Name=Ec-00_002540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=609bp|location=Sequence derived from alignment at chr_00:2757239..2759386- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACTGCGCTGGAAACACTGCCGAGACCTGCGGCGGCTTTGACGCCCT
CACTCTGTACGAGATCGCCTCCGAAGCCCCTCCTACGCCAGCGCCTTTCA
CTCCCCCCGGACCCACGCCCGCGCCGGCCAGTCCCGTGGTCCCCTCCGGC
GACTACGACTTCGTCGGGTGTGTTGCCGACAGCCAATCCTCTAGGGTGAT
GCCTGTGGGACCGCTCGCGGAGGACGTCATGTCTGCGGAGATCTGTTTCG
GGATTTGCTCAGCCCAAGACGACTCAAACACCCACTTCGGCACCCAGTAC
GGGGAAGAGTGCTGGTGCACAGGATCGCTCGGAACAACCGAGACCTCCAG
CGCCTGCACCATGGACTGCGCTGGAAACAGTGCGGAGACCTGCGGCGGCT
TTGACGCCCTTTCCATGTACGAGATCGTCGCCGACACCTCTTCCCCTCCT
ACGCCCGCGCCGACCCTCCCCGTCCCTCCTACGCCCGCGCCGGCCAGCAT
CGTCTCCGACGACTACGAGGTCATCGGATGTGTGGCCGACAACCAAGCCG
CCAGGGTGATGCCGGTGGGACCTTTGGCCGAGGATACCATGTCCGCGGAG
GTGGGTTAA
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protein sequence of Ec-00_002540.1

>Ec-00_002540.1 ID=Ec-00_002540.1|Name=Ec-00_002540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=203bp
MDCAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGPTPAPASPVVPSG
DYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQY
GEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPP
TPAPTLPVPPTPAPASIVSDDYEVIGCVADNQAARVMPVGPLAEDTMSAE
VG*
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mRNA from alignment at chr_00:2757239..2759386-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_002540.1 ID=Ec-00_002540.1|Name=Ec-00_002540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2148bp|location=Sequence derived from alignment at chr_00:2757239..2759386- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGACTGCGCTGGAAACACTGCCGAGACCTGCGGCGGCTTTGACGCCCT
CACTCTGTACGAGATCGCCTCCGAAGCCCCTCCTACGCCAGCGCCTTTCA
CTCCCCCCGGACCCACGCCCGCGCCGGCCAGTCCCGTGGTCCCCTCCGGC
GACTACGACTTCGTCGGGTGTGTTGCCGACAGCCAATCCTCTAGGGTGAG
ACGAAGAGGAGAGATCAATGGAGGTTAGAGGTTTCGCGGTGGGTGAGGAA
TTGTAGAACAGATGATTCTCGCCTCACCCGTGTAGAGAATACGGATGAGC
TACAGAAGGGAGTGGTGGGTATCTCGCCCATGTTGTTAGTGGGGAGCGCT
CGCGACAGCGAGAGAGGAAGAGAGAGAGGAACTGAGAAATAGAGAGGGAA
GTGGTGATGGTGTGCCAACCGAAACCACGAGAGTGCGAGTGGAAAATCGC
ACGCGAGTGAGAAGCGGGCGATAAAGTTAGGGTACACTACACGCCAGCAG
TATTTGAGCCTTGATTCCCGTGGGAGCAAACGAACAGCCACGGCATGCAG
AGTAGTTGATAGGGTGGAGTTCTTGAATGAGCACCTTTTGTTGAAGGTCA
AGTTTTTCACACTGCCGCCCTCGACAGGGCTGGTGTTTTATCGACATCGC
ACGCGCGTATTTGTTCCTTTTGACTCTTGCACGTCTTGTTTTCTCGAATG
AAGGTGATGCCTGTGGGACCGCTCGCGGAGGACGTCATGTCTGCGGAGGT
AGGTGTTGCGGATAACGGAGAGATCCATACTGTACTGCGTTTTCCGAGGT
AATTGGGTTTTGTTTGACCCTCCCGTAGCTTTCCAAAGGAGTCTGCCATC
CGGTACTGCTTCGCTGGGGCAGGTGCTGTGCTCTTTCCTCGTTCCCCGCG
TAGATTGAGTTGTGGCCCTCTGCTCTCCTTGCCCCCCCCCAAAAATATGG
TTTTCCTTCCCAGATCTGTTTCGGGATTTGCTCAGCCCAAGACGACTCAA
ACACCCACTTCGGCACCCAGTACGGGGAAGAGGTGCGTGGCGTGGGTTTG
AGATTGGCTTTGGCATTGGTGGTACTGCTGGTGTTGTTGGCGCCGTTGCC
TGGTGTACTGCTCCTGTTGATAGTCTTCTGGCCTTGCTCGATTCGATTTC
TTCAGCGGAAGTCGCCTCCGGCACTTTTTCGACCACCAGAGCCCATGCTG
CCATGCTGCCAGCTCCACATCGTGCGGTTGGTCGTGTAACACGCGGTGCT
TGACACGAACCAGCCTCCGACGAATGACCAAACGCAGTTTCCACCCGATT
CGCGCATATTCATTAACCGAAGTCCTCTTCTTCTTCCCTCCTGCTATCGC
ACCCCCCACCCCCCGCAAACCACGTTTCGTTCTCAGTGCTGGTGCACAGG
ATCGCTCGGAACAACCGAGACCTCCAGCGCCTGCACCATGGACTGCGCTG
GAAACAGTGCGGAGACCTGCGGCGGCTTTGACGCCCTTTCCATGTACGAG
ATCGTCGCCGACACCTCTTCCCCTCCTACGCCCGCGCCGACCCTCCCCGT
CCCTCCTACGCCCGCGCCGGCCAGCATCGTCTCCGACGACTACGAGGTCA
TCGGATGTGTGGCCGACAACCAAGCCGCCAGGGTGAGAGTCGAAGTAGTG
GTCGTCTTCGGTGTCCTTGGTGCGGCAATGTTGGAAGTGTTAATGCCTGT
GCCACGACCGGCTGTGGTGTCCAATGTGGTGTTCCTGAGTGCTCAGCCTG
CACAACCGTTGAGCGAGGTTTTCTTGTTTGACACATCGAACAATGGCGTG
ATGGGAGGTGAAGGCGCGCTACCATAATGTTTCCACTCGGGTTTCGCATC
GAAGGAAGAATATTCTGGAACCCTTGGTCTTGTGTGGACGACCGTGTTGC
CACCTCCAGAACCGATGTCATACGCACTGCACACGAGTGATTCGCCACGT
CTGGGCCACCCTCTCTCGACTTTCAACAATTAGTTGCTGACATAGTCCCC
AAGCTTGGCCGACTTGTTTGGTTCGAGCTGTCCATTCCCTTGTGTTCCTG
TTTTTTCATTTTATTCCCCTCCTGCCTTAATGTTCGGATCGCAGGTGATG
CCGGTGGGACCTTTGGCCGAGGATACCATGTCCGCGGAGGTGGGTTAA
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Coding sequence (CDS) from alignment at chr_00:2757239..2759386-

>Ec-00_002540.1 ID=Ec-00_002540.1|Name=Ec-00_002540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=609bp|location=Sequence derived from alignment at chr_00:2757239..2759386- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGACTGCGCTGGAAACACTGCCGAGACCTGCGGCGGCTTTGACGCCCT
CACTCTGTACGAGATCGCCTCCGAAGCCCCTCCTACGCCAGCGCCTTTCA
CTCCCCCCGGACCCACGCCCGCGCCGGCCAGTCCCGTGGTCCCCTCCGGC
GACTACGACTTCGTCGGGTGTGTTGCCGACAGCCAATCCTCTAGGGTGAT
GCCTGTGGGACCGCTCGCGGAGGACGTCATGTCTGCGGAGATCTGTTTCG
GGATTTGCTCAGCCCAAGACGACTCAAACACCCACTTCGGCACCCAGTAC
GGGGAAGAGTGCTGGTGCACAGGATCGCTCGGAACAACCGAGACCTCCAG
CGCCTGCACCATGGACTGCGCTGGAAACAGTGCGGAGACCTGCGGCGGCT
TTGACGCCCTTTCCATGTACGAGATCGTCGCCGACACCTCTTCCCCTCCT
ACGCCCGCGCCGACCCTCCCCGTCCCTCCTACGCCCGCGCCGGCCAGCAT
CGTCTCCGACGACTACGAGGTCATCGGATGTGTGGCCGACAACCAAGCCG
CCAGGGTGATGCCGGTGGGACCTTTGGCCGAGGATACCATGTCCGCGGAG
GTGGGTTAA
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Synonyms
The feature 'Ec-00_002540.1' has the following synonyms
Synonym
Esi1541_0001
Esi_1541_0001