Ec-00_002530.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_002530.1
Unique NameEc-00_002530.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length129
Homology
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BLAST of Ec-00_002530.1 vs. uniprot
Match: D7FL54_ECTSI (DNA-directed RNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL54_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 9.550e-83
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 1 
Query:    1 MQEQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNSLGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVFTQKQALLYIGTKMRVPPKAGARAMRQQSS 384
            MQEQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNSLGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVFTQKQALLYIGTKMRVPPKAGARAMRQQSS
Sbjct:    1 MQEQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNSLGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVFTQKQALLYIGTKMRVPPKAGARAMRQQSS 128
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BLAST of Ec-00_002530.1 vs. uniprot
Match: A0A6H5JAF8_9PHAE (DNA-directed RNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAF8_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 6.170e-75
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 1 
Query:    1 MQEQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNSLGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVFTQKQALLYIGTKMRVPPKAGARAMRQQSS 384
            MQEQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNSLGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGV+TQKQALLYIGTKMRVPPKAGARAMRQQSS
Sbjct:  236 MQEQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNSLGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVYTQKQALLYIGTKMRVPPKAGARAMRQQSS 363
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BLAST of Ec-00_002530.1 vs. uniprot
Match: A0A835Z565_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z565_9STRA)

HSP 1 Score: 162 bits (411), Expect = 6.570e-44
Identity = 83/115 (72.17%), Postives = 97/115 (84.35%), Query Frame = 1 
Query:    1 MQEQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNSLGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVFTQKQALLYIGTKMRVP 345
            MQEQLSKNRVIIE D K N+SA I SSTHERKSRC IH+K+GKVY+ HN+LGDDVPIVV ++AMG  SDQEIVQLVGSEP +++AF  S+E++ +VGV TQKQAL YIG KMR P
Sbjct:  212 MQEQLSKNRVIIELDNKGNVSANIQSSTHERKSRCAIHVKHGKVYLHHNTLGDDVPIVVFMKAMGVESDQEIVQLVGSEPHLVDAFGESIEEALAVGVMTQKQALKYIGRKMRNP 326
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BLAST of Ec-00_002530.1 vs. uniprot
Match: A0A7S3H3I2_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3I2_9STRA)

HSP 1 Score: 154 bits (388), Expect = 8.160e-41
Identity = 74/112 (66.07%), Postives = 94/112 (83.93%), Query Frame = 1 
Query:    1 MQEQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNSLGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVFTQKQALLYIGTKM 336
            M EQLSKNRVIIE D K N+SAAITSSTH+RKSRCNI  KN K+Y+KHNSLGDD+PIV+IL+AMG   DQEIVQLVG+EP++++ F  SLE+  ++G+F+Q QAL +IG ++
Sbjct:   66 MHEQLSKNRVIIELDPKDNVSAAITSSTHDRKSRCNIFFKNNKMYLKHNSLGDDIPIVIILKAMGLECDQEIVQLVGTEPEMLDMFAGSLEEPYNLGIFSQDQALTFIGNRV 177
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BLAST of Ec-00_002530.1 vs. uniprot
Match: A0A1V9Z156_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z156_9STRA)

HSP 1 Score: 151 bits (381), Expect = 7.090e-40
Identity = 76/118 (64.41%), Postives = 94/118 (79.66%), Query Frame = 1 
Query:    7 EQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNSLGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVFTQKQALLYIGTKMRVPPKAGA 360
            EQLSKNRVI+E DGK N+ A+ITSSTHERKSR NI +  GK+Y+K NS  DD+PIVV+ R MG TSDQEIV LVG EPD+M++F AS+E+S  + +FTQ QAL YI +KM++  KAGA
Sbjct:  208 EQLSKNRVILEEDGKNNVCASITSSTHERKSRTNIFLNKGKIYLKSNSFTDDLPIVVVFRGMGMTSDQEIVSLVGHEPDVMDSFAASIEESSDLKIFTQTQALTYIASKMKI--KAGA 323
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BLAST of Ec-00_002530.1 vs. uniprot
Match: A0A2P4YK15_9STRA (DNA-directed RNA polymerase (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YK15_9STRA)

HSP 1 Score: 144 bits (364), Expect = 9.580e-40
Identity = 74/124 (59.68%), Postives = 90/124 (72.58%), Query Frame = 1 
Query:    7 EQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNSLGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVFTQKQALLYIGTKMRVPPKAGARAMRQQ 378
            EQLSKNR+IIE DGK N+ A+ITSSTHERKSR NI +  G+VY+K NS G D+PIV++ R MG  SDQEIV LVGSE DI +   AS E++  + VFTQ+QAL YIG+KM    K GA   R +
Sbjct:  186 EQLSKNRIIIEEDGKHNVCASITSSTHERKSRTNIFLNKGRVYLKSNSFGSDIPIVIVFRGMGVESDQEIVSLVGSESDICDVMSASFEEASDLKVFTQQQALEYIGSKMNALTKIGATGGRHR 309
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BLAST of Ec-00_002530.1 vs. uniprot
Match: K3X1L2_GLOUD (DNA-directed RNA polymerase subunit beta n=32 Tax=Oomycota TaxID=4762 RepID=K3X1L2_GLOUD)

HSP 1 Score: 144 bits (362), Expect = 2.630e-37
Identity = 73/124 (58.87%), Postives = 90/124 (72.58%), Query Frame = 1 
Query:    7 EQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNSLGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVFTQKQALLYIGTKMRVPPKAGARAMRQQ 378
            EQLSKNRVIIE D K+N+ A+ITSSTHERKSR NI +   +VY+K NS G D+PIV++ R MG  SDQEIV L+GSEPD+ +A  AS E++  + VFTQ QAL YIG+KM    K GA   R +
Sbjct:  196 EQLSKNRVIIEEDAKQNVCASITSSTHERKSRTNIFINKNRVYLKSNSFGSDIPIVIVFRGMGMESDQEIVSLIGSEPDVTDALTASFEEASDLKVFTQLQALEYIGSKMNAVTKVGATGGRHR 319
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BLAST of Ec-00_002530.1 vs. uniprot
Match: A0A7S2WH87_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WH87_9STRA)

HSP 1 Score: 143 bits (361), Expect = 3.580e-37
Identity = 72/119 (60.50%), Postives = 91/119 (76.47%), Query Frame = 1 
Query:    1 MQEQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNSLGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVFTQKQALLYIGTKMRVPPKAG 357
            MQEQLSKNRVIIE D K + +A ITSSTHERKSRC+I +K G+VY+KHN+LG+D+PI ++ +AMG  SDQEIVQ+VGSEP+    F  SLE+   + + TQKQAL YIG K+R   + G
Sbjct:  179 MQEQLSKNRVIIEVDSKGHTAATITSSTHERKSRCSIFVKAGRVYLKHNTLGEDMPIAIVFKAMGIESDQEIVQMVGSEPETPAQFALSLEEPVVLQILTQKQALTYIGNKIRANQRPG 297
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BLAST of Ec-00_002530.1 vs. uniprot
Match: A0A5A8CMB6_CAFRO (DNA-directed RNA polymerase subunit beta n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8CMB6_CAFRO)

HSP 1 Score: 143 bits (361), Expect = 3.620e-37
Identity = 69/112 (61.61%), Postives = 92/112 (82.14%), Query Frame = 1 
Query:    4 QEQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNSLGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVFTQKQALLYIGTKMR 339
            QEQLSKNR+I+E D K  +SA++TSSTHERKSR  I  K+G++++KHN++GDDVP+V +LRAMG TSDQEIVQLVGSEP++ +A   SLE++  +G+ TQ QAL YIG ++R
Sbjct:  468 QEQLSKNRIIVELDPKGAVSASVTSSTHERKSRTVITTKHGRIHLKHNTIGDDVPVVAVLRAMGVTSDQEIVQLVGSEPELQDALAPSLEETLELGILTQAQALEYIGARIR 579
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BLAST of Ec-00_002530.1 vs. uniprot
Match: I2CNY0_NANGC (DNA-directed RNA polymerase subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CNY0_NANGC)

HSP 1 Score: 143 bits (360), Expect = 4.890e-37
Identity = 75/114 (65.79%), Postives = 92/114 (80.70%), Query Frame = 1 
Query:    1 MQEQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNG-KVYMKHNSLGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVFTQKQALLYIGTKMR 339
            MQEQLSKNRVIIE D K N+SA+ITSSTH+RK R NI +KNG KVY+K+N LGDDVPIVV+L+AMG  SDQEIV +VG  P++++AF  SLE+   +G+ TQ QAL YIG K+R
Sbjct:  204 MQEQLSKNRVIIEEDNKGNVSASITSSTHDRKGRSNIFVKNGTKVYLKNNLLGDDVPIVVVLKAMGMQSDQEIVCMVGDSPEMLDAFAPSLEEPYHLGICTQAQALRYIGAKIR 317
The following BLAST results are available for this feature:
BLAST of Ec-00_002530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL54_ECTSI9.550e-83100.00DNA-directed RNA polymerase n=1 Tax=Ectocarpus sil... [more]
A0A6H5JAF8_9PHAE6.170e-7599.22DNA-directed RNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A835Z565_9STRA6.570e-4472.17DNA-directed RNA polymerase subunit beta n=1 Tax=T... [more]
A0A7S3H3I2_9STRA8.160e-4166.07DNA-directed RNA polymerase subunit beta n=1 Tax=S... [more]
A0A1V9Z156_9STRA7.090e-4064.41DNA-directed RNA polymerase subunit beta n=1 Tax=T... [more]
A0A2P4YK15_9STRA9.580e-4059.68DNA-directed RNA polymerase (Fragment) n=2 Tax=Phy... [more]
K3X1L2_GLOUD2.630e-3758.87DNA-directed RNA polymerase subunit beta n=32 Tax=... [more]
A0A7S2WH87_9STRA3.580e-3760.50DNA-directed RNA polymerase subunit beta n=1 Tax=R... [more]
A0A5A8CMB6_CAFRO3.620e-3761.61DNA-directed RNA polymerase subunit beta n=3 Tax=S... [more]
I2CNY0_NANGC4.890e-3765.79DNA-directed RNA polymerase subunit beta n=3 Tax=M... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2747539..2749425 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score250.0
Seed ortholog evalue6.1e-64
Seed eggNOG ortholog2880.D7FL54
Preferred namePOLR3B
Length387
KEGG rclassRC02795
KEGG koko:K03010,ko:K03021
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko04623,ko05016,ko05169,map00230,map00240,map01100,map03020,map04623,map05016,map05169
KEGG ModuleM00180,M00181
Hectar predicted targeting categoryother localisation
Gene idEc-00_002530.1
GOsGO:0000428,GO:0001817,GO:0001819,GO:0002682,GO:0002684,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005666,GO:0005730,GO:0005736,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006360,GO:0006383,GO:0006399,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009553,GO:0009561,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0031347,GO:0031349,GO:0031974,GO:0031981,GO:0032479,GO:0032481,GO:0032501,GO:0032502,GO:0032648,GO:0032728,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0045088,GO:0045089,GO:0046483,GO:0048229,GO:0048518,GO:0048583,GO:0048584,GO:0048856,GO:0050776,GO:0050778,GO:0050789,GO:0051239,GO:0051240,GO:0055029,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0080134,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.DNA-directed 5'-3' RNA polymerase activity
EggNOG OGsCOG0085@1,KOG0215@2759
EC2.7.7.6
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_002530Ec-00_002530Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 2747539..2749425 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002530.1.3Ec-00_002530.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2747539..2747700 -
Ec-00_002530.1.2Ec-00_002530.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2748564..2748693 -
Ec-00_002530.1.1Ec-00_002530.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2749331..2749425 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002530.1CDS:Ec-00_002530.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 2747539..2747700 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002530.1Ec-00_002530.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 2747539..2749425 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_002530.1 ID=Ec-00_002530.1|Name=Ec-00_002530.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=129bp
MQEQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNS
LGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVFT
QKQALLYIGTKMRVPPKAGARAMRQQSS*
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spliced messenger RNA

>Ec-00_002530.1 ID=Ec-00_002530.1|Name=Ec-00_002530.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=387bp|location=Sequence derived from alignment at chr_00:2747539..2749425- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGGAGCAGCTGTCGAAGAATCGAGTGATCATCGAGTACGACGGGAA
GAAGAACATCTCCGCCGCCATCACATCCTCCACGCACGAGAGAAAGTCCC
GATGCAACATCCACATGAAAAACGGGAAGGTGTACATGAAGCACAACAGC
CTGGGGGACGACGTGCCGATAGTGGTCATCCTCAGGGCGATGGGGGCCAC
AAGCGACCAGGAGATTGTCCAGCTTGTGGGGTCCGAGCCGGATATCATGA
ACGCCTTCATGGCCAGTCTTGAGGACTCGCAGTCCGTGGGCGTGTTCACG
CAGAAGCAGGCTTTGCTGTACATCGGGACGAAGATGAGGGTTCCCCCTAA
GGCCGGCGCAAGAGCGATGCGGCAACAATCCTCGTGA
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protein sequence of Ec-00_002530.1

>Ec-00_002530.1 ID=Ec-00_002530.1|Name=Ec-00_002530.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=129bp
MQEQLSKNRVIIEYDGKKNISAAITSSTHERKSRCNIHMKNGKVYMKHNS
LGDDVPIVVILRAMGATSDQEIVQLVGSEPDIMNAFMASLEDSQSVGVFT
QKQALLYIGTKMRVPPKAGARAMRQQSS*
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mRNA from alignment at chr_00:2747539..2749425-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_002530.1 ID=Ec-00_002530.1|Name=Ec-00_002530.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1887bp|location=Sequence derived from alignment at chr_00:2747539..2749425- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCAGGAGCAGCTGTCGAAGAATCGAGTGATCATCGAGTACGACGGGAA
GAAGAACATCTCCGCCGCCATCACATCCTCCACGCACGAGAGAAAGTAAG
TTGAAGGAGGTTACGGTAGATATGTAGATCGCGCATGATAAAAGGATGGA
CCCGAAAACCCCAGAGGGCAACGGACACTTGTTCAGAGCGGAGACCGCCG
GAAACTGCGGACACGGAGAGAGCCCCCCCCCTCTCCCCCTTCTCTCTGCC
TATCTCTCTATCTGTCTGTCTGTGCGTGTCTCTTTCCGTCTCTCTCTCTC
TCTCTCCGCGCGTACCATCATCCATGCACAGCACACACACCTCTATGGGA
GAGGAATGGCAAGTCCTCAGTTTTACTACAGCAGCAGTGTGTGGGGTATC
AAACGTGGCGGTCCTACGTTAGTCCGATCGGTGGAAAAGGGGGAGGCGTC
TGTCGTGCCTTGTACTTGTGTACCATGGACTTTCGAACCCCCGTGTGTCG
TGTCGAGTAGATGTGACGGAATAAAAGGGTGAAATGAAAAAGCCTGACCC
TGCGCCGCACCTTTGGTGTAGCGAGCAAGGTTCGATCCCACACCCAGACG
CACGCGCAAATCTTTTCTTTTTCGCACGGGTGGTAATTTGGCGTCCTTTT
TTTGGCCCCTGCCGCTGCTACTGCGTCCGTTGCTGCTGCCGCCGCCGGTG
TCGGCGTTGGTGGTGGTGCTCTCTGCCGCAAGGTCCCGATGCAACATCCA
CATGAAAAACGGGAAGGTGTACATGAAGCACAACAGCCTGGGGGACGACG
TGCCGATAGTGGTCATCCTCAGGGCGATGGGGGCCACAAGCGACCAGGAG
ATTGTCCAGCTTGTGAGTTGCCGTACCGTACCGCACCGTTACCGTTACCG
TTACCGTTACCGTTACCGTTGCCGCACCGCACCGCACTGTACCGTACCGT
ACCGTACCGTACGTACCGTAAGCAGTAGCAGGCGGTTACGTGCAGTTTAG
CGAGATGTTGCGGCTTATGTGCTTGCGAGATTTCGCCGCACGTACTGCGC
AGTACGCCGTTACATGTAGGTGGCTTGTCGTCAATTGGCGGTTACTTTGT
TTCGTGAGCCGGTGTGGCTGTGTCCCTCTCTGCCTCCACGCCCTTGCTCT
GGTAACAGCCTCCCCCTTTTTTTCCCTCGGAAACTTACTTAGTGTAAAGA
CACCAGCTCCAGACGCTTAGCAGCAGTAACGGCCCGATATCGCTGTCCCC
TAGGGAAGTTACGATTCCTGTGCATACCTCGGGGTGTATGTCCAATGCGC
CACGTGCCTGACACACGCGGCGGCGTGCTTGGGGACTGTTTTCCCGTGAA
CTTGAGAGCAGCTGCATTCAATCCTCGGCACAAGGGCACCAAAAGAGTAG
ACGTTTCGGGCTTGCTCTAATAACGAGGCTGGGGTGCACGCAGCTGATAA
CTCGGTCGACTGTTCTCCCCCGTCACTGGTTCTATTATAGAAGAACCAAA
TACTAAATACCTCCTTACGTGCGTACTTGCGCCCGTACGATAGGAACAAA
GTGATCCGACGTTGTTGCTAAACGAACCGGAAGAATCGAGAAATTAAAGA
TTGCATCCGCACAGAATGCGGCGGAATCATGTACTCGAAACGGGTGTAGC
AGCACCACTGGTCGTGCACATAACCCCCCGTGGACATGCATTGCATGCTG
CGTGCCGCCTTGTGTGTGTTTTCAGGTGGGGTCCGAGCCGGATATCATGA
ACGCCTTCATGGCCAGTCTTGAGGACTCGCAGTCCGTGGGCGTGTTCACG
CAGAAGCAGGCTTTGCTGTACATCGGGACGAAGATGAGGGTTCCCCCTAA
GGCCGGCGCAAGAGCGATGCGGCAACAATCCTCGTGA
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Coding sequence (CDS) from alignment at chr_00:2747539..2749425-

>Ec-00_002530.1 ID=Ec-00_002530.1|Name=Ec-00_002530.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=387bp|location=Sequence derived from alignment at chr_00:2747539..2749425- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCAGGAGCAGCTGTCGAAGAATCGAGTGATCATCGAGTACGACGGGAA
GAAGAACATCTCCGCCGCCATCACATCCTCCACGCACGAGAGAAAGTCCC
GATGCAACATCCACATGAAAAACGGGAAGGTGTACATGAAGCACAACAGC
CTGGGGGACGACGTGCCGATAGTGGTCATCCTCAGGGCGATGGGGGCCAC
AAGCGACCAGGAGATTGTCCAGCTTGTGGGGTCCGAGCCGGATATCATGA
ACGCCTTCATGGCCAGTCTTGAGGACTCGCAGTCCGTGGGCGTGTTCACG
CAGAAGCAGGCTTTGCTGTACATCGGGACGAAGATGAGGGTTCCCCCTAA
GGCCGGCGCAAGAGCGATGCGGCAACAATCCTCGTGA
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Synonyms
The feature 'Ec-00_002530.1' has the following synonyms
Synonym
Esi1535_0002
Esi_1535_0002