Ec-00_002090.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_002090.1
Unique NameEc-00_002090.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length537
Homology
[Close]
BLAST of Ec-00_002090.1 vs. uniprot
Match: D8LEF5_ECTSI (Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF5_ECTSI)

HSP 1 Score: 1052 bits (2720), Expect = 0.000e+0
Identity = 536/592 (90.54%), Postives = 536/592 (90.54%), Query Frame = 1 
Query:    1 MDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVQPPDGHTYDCGNMPADWGVSNAADIANLTKTQPSVALKAYGNFVDAVYNTTIGKTAAACDFDGLTVLTCGREEPW--------------------------------------------------------DAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPNDACVHPPATDWAEPLGTDGSGSGGDANLVAAQAPSGVTARVDGNAAAAVGVSHSPEEAQRGSQEGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQGXXXXXXXXXXXXXXXXXXGWMPAVFSSGYDTIGQQSLP 1608
            MDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVQPPDGHTYDCGNMPADWGVSNAADIANLTKTQPSVALKAYGNFVDAVYNTTIGKTAAACDFDGLTVLTCGREEPW                                                        DAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPNDACVHPPATDWAEPLGTDGSGSGGDANLVAAQAPSGVTARVDGNAAAAVGVSHSPEEAQRGSQEGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQGXXXXXXXXXXXXXXXXXXGWMPAVFSSGYDTIGQQSLP
Sbjct:    1 MDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVQPPDGHTYDCGNMPADWGVSNAADIANLTKTQPSVALKAYGNFVDAVYNTTIGKTAAACDFDGLTVLTCGREEPWRTAPWYDQLKAPIRAVNIGGLFVLERWIVPTFTSWGDDSGIRDQHSFSEKCGELGTDAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPNDACVHPPATDWAEPLGTDGSGSGGDANLVAAQAPSGVTARVDGNAAAAVGVSHSPEEAQRGSQEGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQGXXXXXXXXXXXXXXXXXXGWMPAVFSSGYDTIGQQSLP 592
[Close]
BLAST of Ec-00_002090.1 vs. uniprot
Match: A0A6H5JTP7_9PHAE (GH5 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTP7_9PHAE)

HSP 1 Score: 736 bits (1900), Expect = 6.230e-265
Identity = 363/404 (89.85%), Postives = 368/404 (91.09%), Query Frame = 1 
Query:  358 AGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPNDACVHPPATDWAEPLGTDGSGSGGDANLVAAQAPSGVTARVDGNAAAAVGVSHSPEEAQRGSQEGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQGXXXXXXXXXXXXXXXXXXGWMPAVF 1569
            AGLYVILDLHGAPGSQNGLDNSG TSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVM          ADLSSDTAVGDRQK+YVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHL EREG+SWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFID DFP DAC+HPPATDWAEPLGTDGSGSGGDANL AAQAPSGVTARVDGNAAAAV VS+SPEE  RGSQ+GASSPGAMLGLVLLGAMAGALATFLLVRRKAASQG                  GWMPAVF
Sbjct:    6 AGLYVILDLHGAPGSQNGLDNSGFTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVM----------ADLSSDTAVGDRQKIYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLTEREGNSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDTDFPEDACIHPPATDWAEPLGTDGSGSGGDANLAAAQAPSGVTARVDGNAAAAVEVSNSPEEPMRGSQKGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQGASASASGGAEKRGGNRGAGWMPAVF 399
[Close]
BLAST of Ec-00_002090.1 vs. uniprot
Match: A0A836CCQ8_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCQ8_9STRA)

HSP 1 Score: 545 bits (1405), Expect = 7.400e-185
Identity = 261/538 (48.51%), Postives = 323/538 (60.04%), Query Frame = 1 
Query:    7 PGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVQPPDGHTYDCGNMPADWG-VSNAADIANLTKTQPSVALKAYGNFVDAVYNTTIGKTAAACDFDGLTVLTCGREEPW------------------------------------------------------------------------------------------------------------------------------DAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPNDACVHPPATDWAEP 1239
            P +  C LDPKLT + LPFFIPDI+  WGS CGRNRGVFV  PPDGHTY C ++P  WG  +N  ++ N T    +VA++   N V +VY T   K AA+CDF+G++ L CGRE+PW                                                                                                                              DAGL VILDLHGAPG QNGLDNSGLTSPDPN +VWGE W+YSP + GNTV+ LAA+++YINHI+D+  LDNIMALELLNEPWA LD+ RVRDFYV++I AVRLVRP +P+ IHDSFRG  W TL+K+FPY D+ MD+H+YHGFNP+D +SDT   DRQKMY HERM+C Y SMLRYQTC+ +PV V EWSLA+DNCMP+LD K  D+GQC+H+AER   SWW+ H RSFA RQI  +E+EMGW+FW WKL++   K++P++ +WSF +AV  G+ID  +P+DAC+HPPA DWA P
Sbjct:   56 PKNQHCVLDPKLTPETLPFFIPDIRQAWGSLCGRNRGVFVTDPPDGHTYSCNDLPERWGPAANVNEVLNQTLVPANVAVETIENIVKSVYFTNPTKDAASCDFEGISTLLCGREDPWKRAPWYDTLKAPIRAVNIGGLFVLERWILPAFVDWGEPTGIIDQHSFSVKCGDLGICEDIKAHWKNFYTAQDFHDMKSMGLNSIRLPVGWWYFAKYANINSAPYIIPDEDLYSLDHPITRVLKWAHDAGLQVILDLHGAPGGQNGLDNSGLTSPDPNNLVWGEAWLYSPNHMGNTVKTLAAISQYINHIDDNHNLDNIMALELLNEPWAFLDIARVRDFYVSAIEAVRLVRPHLPVFIHDSFRGNAWPTLLKDFPYPDVFMDSHLYHGFNPSDAASDTPSMDRQKMYTHERMSCGYGSMLRYQTCSTVPVAVLEWSLAIDNCMPYLDPKKQDYGQCNHVAERLTDSWWTSHIRSFASRQIAVFEKEMGWSFWCWKLDEQAMKSDPSAAFWSFKLAVHKGYIDTRYPSDACMHPPAEDWAVP 593
[Close]
BLAST of Ec-00_002090.1 vs. uniprot
Match: A0A4D9D2R7_9STRA (Cellulase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2R7_9STRA)

HSP 1 Score: 462 bits (1190), Expect = 2.390e-153
Identity = 224/535 (41.87%), Postives = 295/535 (55.14%), Query Frame = 1 
Query:   22 CKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVQPPDGHTYDCGNMPADWGVSNAADIANLTKTQPSVALKAYGNFVDAVYNTTIGKTAAACDFDGLTVLTCGREEPW------------------------------------------------------------------------------------------------------------------------------DAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPNDACVHPPATDWAEPLGT 1248
            C+LDPK+T   +  F  +I   WG ACGRNRGVF+++P DG TYDCGN+P  WG+ N   + +L   QP+ A+ A  N++ AVYN+T+ K  +ACDF+ L  LTCGREEPW                                                                                                                              +AGL VILDLHGAP SQNGLDNSG  + DPN   WGETW+Y       TV+IL++MA YI  + +   LDN+M LEL+NEPW  LD+G VRDFY+ +I++VR V P MPI++HDSF G MWA ++K FP+ ++ MDTHIYHGFNP+D++SD+   D+QKMYVHERM+C+ TSMLRY+TC+  P + GE+SLA+DNCM  +D KF ++GQCD +A R    WW +H RSFA RQ+D YERE+GW+FWT+KL+ H E    ++  WSF +AV+ G+ID  +P  AC + P  DW +   T
Sbjct:    3 CRLDPKVTASTILDFQTEIGELWGGACGRNRGVFILEPADGKTYDCGNLPESWGIPN---VGSLLSAQPAKAVTALTNYISAVYNSTVVKGPSACDFNALAYLTCGREEPWRTVPWYNKIKNPIRAVNIGGLFVLEQWILPGFVTWGEETGIWDQYTFSSECKKMDICDQLKQHWETWYSADDFLQMKKFGLNTIRLPVGYWYFAERVGLNPAPYLVPDQDLFDAHHPITNVIRWADEAGLQVILDLHGAPYSQNGLDNSGRMTDDPNVHNWGETWLYDETAISETVQILSSMALYIKFLSEEQDLDNVMMLELVNEPWVFLDMGMVRDFYILAISSVRAVLPDMPILLHDSFHGDMWAMMLKYFPFDNVYMDTHIYHGFNPSDIASDSYQADKQKMYVHERMSCAMTSMLRYETCSAAPTITGEFSLAIDNCMDAIDRKFQNYGQCDRIARRSTDPWWKDHIRSFAHRQMDVYERELGWSFWTYKLDKHAETTAESAPLWSFRLAVKEGYIDTSYPPHACRYDPVADWQDKAST 534
[Close]
BLAST of Ec-00_002090.1 vs. uniprot
Match: A0A7S2XF99_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XF99_9EUKA)

HSP 1 Score: 274 bits (701), Expect = 2.160e-81
Identity = 134/297 (45.12%), Postives = 186/297 (62.63%), Query Frame = 1 
Query:  364 LYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKN--FPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLD------SKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPNDA-----CVHP 1215
            + +ILDLHGAPGSQNGLDNSG+ S DP+   WG+ W +S +    TV  L  M  YIN +  + GL N++ LEL+NEPW   D+  VRDFYV ++T +R +   +PI++ D+FR   W  L++   F +++I MDTH+YH FNP+D++SD    D  K      MAC Y S+LRY+TC+ LP M GEWSLA+D+CM +L       ++F DFGQC +L ER  +  W+   + FA RQ   +E+E+GW FWTWK++    K+  A   WS+SMAVE G+   +   +A     C HP
Sbjct:  279 IQIILDLHGAPGSQNGLDNSGIRSMDPDAERWGDNWFFSEDFREMTVMTLKTMTHYINMLNKN-GLSNVIMLELMNEPWVFGDMSVVRDFYVDAVTEIRKINNTLPILVCDAFRHDEWHWLLRRRGFSFENIYMDTHLYHAFNPSDVASDNPHDDMMKQITASDMACGYGSLLRYKTCSSLPTMTGEWSLAIDDCMKFLTGSTSSANQFTDFGQCKNLKERN-TPQWTALIKDFAARQRAVFEKELGWVFWTWKVDKEASKDISAP-LWSYSMAVEAGYFPDNLNTEADVTKGCDHP 572
[Close]
BLAST of Ec-00_002090.1 vs. uniprot
Match: A0A6T6YDK2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6YDK2_9EUKA)

HSP 1 Score: 276 bits (705), Expect = 8.040e-81
Identity = 131/298 (43.96%), Postives = 187/298 (62.75%), Query Frame = 1 
Query:  361 GLYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKN--FPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLD------SKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPND-----ACVHP 1215
            G+ VILDLHGAPGSQNGLDNSG+ S DP    WG+ W Y  +   +TV+IL  M  YIN +  +  +DN++ LEL+NEPW   D+  VR+FY+ +IT +R +   +P+++ D+FR   W  L+++  F + ++ MDTH+YH FNP+D++SD    D  K      MAC Y S+LRY+TC+ LP + GEWSLA+D+CM +L       ++F DFGQC  L  R  +  W+   + F+ RQ   +E+E+GW FW WK++D   K+  A KYWS++ AVEH +   D   +     AC HP
Sbjct:  350 GIQVILDLHGAPGSQNGLDNSGIRSMDPIAERWGDHWFYEQKYRDDTVKILGVMTHYINMLNKN-NIDNVIMLELMNEPWVFGDMSIVRNFYIEAITKIRKINSTLPMLVCDAFRHEEWHWLLRSRGFSFDNVYMDTHLYHAFNPSDVASDNPHDDMMKQITASNMACGYGSLLRYKTCSSLPTLTGEWSLAIDDCMKFLTGSTHSANQFKDFGQCKDLESRT-TDQWTTLVKDFSRRQRAVFEKELGWIFWAWKVDDVANKDISA-KYWSYTKAVEHEYFPKDLEKEPKVVLACDHP 644
[Close]
BLAST of Ec-00_002090.1 vs. uniprot
Match: A0A6H5JXP3_9PHAE (GH5 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP3_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 1.340e-79
Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 1 
Query:    1 MDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVQPPDGHTYDCGNMPADWGVSNAADIANLTKTQPSVALKAYGNFVDAVYNTTIGKTAAACDFDGLTVLTCGREEPW 354
            MDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVV+PPDGHTYDCGNMPADWGVSNAADIANLTKT+P+VALKAYGNFVDAVYNTTIGKTA ACDFDGLTVLTCGREEPW
Sbjct:    1 MDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVEPPDGHTYDCGNMPADWGVSNAADIANLTKTKPAVALKAYGNFVDAVYNTTIGKTAEACDFDGLTVLTCGREEPW 118
[Close]
BLAST of Ec-00_002090.1 vs. uniprot
Match: A0A448Z5T8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z5T8_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.300e-30
Identity = 121/466 (25.97%), Postives = 208/466 (44.64%), Query Frame = 1 
Query:   22 CKLDPKLTEKDLPFFIPDIQ-GTWGSACGRNRGVFVVQPPDGHTYDCGNMPADW----GVS-------NAADIANLTKTQPSV----ALKAYGNFVDAVYNTTIGKTAA--ACDFDGLTVLTCGREE---------PWDAGLYVILDLHGAPGSQNGLDNSGLTSPDPNEI---------VWGETWMYSPENN-GNTVRILAAMA----------EYINHIEDSFGLDNIM-ALELLNEPWAHLDLGRVRDFYV---TSITAVRL-VRPLMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAV--LPVMVGE-WSLAVDNCMPWL--DSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPNDACVHPPATDWAEPLGT 1248
            CK+D  +  +     + DI    + S CG+NRG FV+ PPDG+TY C  +P D     G+        + A+  NL   + ++    A+      V+ VY++T  K +   ACD +GL  L+C  E+         P  +   V L +  AP   N  +    TS D  ++         +   T  +  EN+ G   +++ A A            ++ +     +D+++ A E  +   A L +   ++  +   T I AVR  + P +P+ +     G +   +  N P     ++    H    AD++S ++  DR K++ HE +AC+  S + +  C    LPV     + L++D+C  W   ++ F D+GQC+   E  GS WW  H  SFA RQ+   ER +GW++  WK+ ++   +EP +      +    G + L   N+A + P     ++P  T
Sbjct:    6 CKIDRDILNEQSIESMDDIALSFFASTCGKNRGAFVLDPPDGNTYGCLGLPEDVAELAGIDPNKNITLSDANAINLNFAEGNITGAEAVSLLDFLVERVYDSTPSKESNLYACDVNGLARLSCEXEKSASPRSDGGPIRSVNLVDLLVPDAPWMTNATNAVSYTSKDFRDMKAMGLNTVQIAVPTSAFXTENDTGAVAKVILAKALDTLKGQGLQAILSLVATGDEIDSVVSASEYASSHGAVLGIVLPKEMKINVETMIDAVRAKIGPDLPLFVPLVGLGDLVKPMGLNDPKVYAALEWS--HTSTIADIASSSSQEDRSKLFYHETVACTMRSPIEHSACFGNRLPVFWSSGFDLSIDDCA-WRHKNNNFMDYGQCNRFEETIGSEWWESHRASFAARQLFAAERGLGWSYSAWKIPENEMNSEPNA------LDDPVGLLSLKAVNNAGLFPDLNGSSDPAKT 462
[Close]
BLAST of Ec-00_002090.1 vs. uniprot
Match: A0A0D2X4F6_CAPO3 (Glucan 1,3-beta-glucosidase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X4F6_CAPO3)

HSP 1 Score: 129 bits (323), Expect = 1.030e-28
Identity = 88/292 (30.14%), Postives = 130/292 (44.52%), Query Frame = 1 
Query:  364 LYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPWAHLDLGRVRDFYVTSITAVRLVRP----LMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFAD-------------FGQCDHLAEREGSSWWSEHT---RSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFI 1179
            + V+LDLHGAPGSQNG D+SG   P    + W            +T   +  +  +I +I D    D I A+EL+NEPW  +D   V+DFYV + +A+R   P     + I+ HD+F    W  +M+   Y ++  D+H YH F+ + L+ D A         H    C+ T           P  +GEWSLA  +C  W +                  FG+C      + + +  ++    R F   Q+D YE   GW FWT K E        ++  W F M +  G+I
Sbjct:  178 IRVLLDLHGAPGSQNGQDHSGHRGP----LDW------------DTDLTVQTLKMFILYIRDHGFTDVIHAIELVNEPWWSVDPKIVQDFYVNAYSAIRQSSPSFTNTLNIVFHDNFNMNAWGGIMEPPAYTNLFQDSHQYHCFDNSLLAMDYAG--------HLNYTCNNTRPAIVTANKYHPTFMGEWSLATTDCPQWANGFLNGNRWEGTLSPGDPVFGKCTGNFGTDVTQFTPDYRAFLRQFTEMQMDAYEAASGWYFWTLKTE--------SAPQWDFLMGLREGWI 437
[Close]
BLAST of Ec-00_002090.1 vs. uniprot
Match: A0A4P9ZTV6_9FUNG (Exo-beta-1,3-glucanase n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZTV6_9FUNG)

HSP 1 Score: 126 bits (317), Expect = 4.580e-28
Identity = 91/294 (30.95%), Postives = 143/294 (48.64%), Query Frame = 1 
Query:  364 LYVILDLHGAPGSQNGLDNSGLTSPDPNEIVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMAL-ELLNEP--WAHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKDIVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDS--KFADFG-----------QCDHLAEREGSSW---WSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLD 1188
            L VI+D+HG PGSQNG DNSG+   D N       W    EN   ++ ++  +A + +H +      N++ + + +NEP  WA LD  ++R FY  + TA+        + IHD+F      T ++N  +    +DTHIYH F   D++  T   ++     H  +AC++   +     A LP MVGEWSLA ++C  WL+   + A F             C  + + + +++   + +  R FA  Q+D YE   GW FW +K E         S  W + + VE G+I +D
Sbjct:  151 LKVIIDVHGQPGSQNGFDNSGIRG-DVN-------WQKKEENLRRSLSVVKRLAAFFSHPQ----FHNVVTMIQPVNEPANWA-LDKTKIRQFYDQAQTAITSTNADFKMDIHDAFLPLAEWTSLRNPNWNRTFLDTHIYHVF---DVALQTKSEEQ-----HIDLACTHKREVATSQ-ANLPTMVGEWSLATNDCTKWLNGYGRGARFNGTYITTAPVCPSCSCIGDADYANFSTHYKQWLRRFAETQMDAYEAGSGWIFWNFKAEQ--------SPQWDYMLGVEQGWIPID 414
The following BLAST results are available for this feature:
BLAST of Ec-00_002090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEF5_ECTSI0.000e+090.54Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Ectocar... [more]
A0A6H5JTP7_9PHAE6.230e-26589.85GH5 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836CCQ8_9STRA7.400e-18548.51Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A4D9D2R7_9STRA2.390e-15341.87Cellulase domain-containing protein n=2 Tax=Monodo... [more]
A0A7S2XF99_9EUKA2.160e-8145.12Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A6T6YDK2_9EUKA8.040e-8143.96Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A6H5JXP3_9PHAE1.340e-7996.61GH5 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP... [more]
A0A448Z5T8_9STRA2.300e-3025.97Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A0D2X4F6_CAPO31.030e-2830.14Glucan 1,3-beta-glucosidase n=1 Tax=Capsaspora owc... [more]
A0A4P9ZTV6_9FUNG4.580e-2830.95Exo-beta-1,3-glucanase n=1 Tax=Dimargaris cristall... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2385949..2397324 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1051.6
Seed ortholog evalue1.3e-304
Seed eggNOG ortholog2880.D8LEF5
Length1611
Hectar predicted targeting categoryother localisation
Gene idEc-00_002090.1
EggNOG OGs2CIRD@1,2S847@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_002090Ec-00_002090Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 2385949..2397324 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002090.1.1Ec-00_002090.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2385949..2386102 +
Ec-00_002090.1.2Ec-00_002090.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2386666..2386798 +
Ec-00_002090.1.3Ec-00_002090.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2388003..2388068 +
Ec-00_002090.1.4Ec-00_002090.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2390669..2390768 +
Ec-00_002090.1.5Ec-00_002090.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2391209..2391364 +
Ec-00_002090.1.6Ec-00_002090.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2391719..2391868 +
Ec-00_002090.1.7Ec-00_002090.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2392482..2392511 +
Ec-00_002090.1.8Ec-00_002090.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2392990..2393024 +
Ec-00_002090.1.9Ec-00_002090.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2393671..2393808 +
Ec-00_002090.1.10Ec-00_002090.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2394412..2394566 +
Ec-00_002090.1.11Ec-00_002090.1.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2395058..2395293 +
Ec-00_002090.1.12Ec-00_002090.1.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2396529..2396746 +
Ec-00_002090.1.13Ec-00_002090.1.13Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 2397285..2397324 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002090.1CDS:Ec-00_002090.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 2385949..2386102 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_002090.1Ec-00_002090.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 2385949..2397324 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_002090.1 ID=Ec-00_002090.1|Name=Ec-00_002090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=537bp
MDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVQPPDGHT
YDCGNMPADWGVSNAADIANLTKTQPSVALKAYGNFVDAVYNTTIGKTAA
ACDFDGLTVLTCGREEPWDAGLYVILDLHGAPGSQNGLDNSGLTSPDPNE
IVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPW
AHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKD
IVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVL
PVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMR
QIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPND
ACVHPPATDWAEPLGTDGSGSGGDANLVAAQAPSGVTARVDGNAAAAVGV
SHSPEEAQRGSQEGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQGAS
SSASGGAEKGGGHRGGGWMPAVFSSGYDTIGQQSLP*
back to top

spliced messenger RNA

>Ec-00_002090.1 ID=Ec-00_002090.1|Name=Ec-00_002090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1611bp|location=Sequence derived from alignment at chr_00:2385949..2397324+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGGACCCGGGGAGCTTCCGTTGCAAGCTCGACCCTAAGCTCACGGAGAA
GGACCTTCCCTTCTTCATCCCGGACATCCAGGGCACCTGGGGTTCGGCCT
GCGGACGGAACCGCGGCGTTTTCGTCGTCCAGCCTCCCGATGGCCACACC
TACGATTGCGGCAACATGCCTGCCGATTGGGGGGTGTCTAACGCCGCCGA
CATCGCCAACCTGACCAAGACCCAGCCGTCCGTCGCGCTGAAGGCCTACG
GTAACTTCGTCGATGCTGTCTACAACACCACCATCGGGAAAACCGCGGCG
GCCTGCGACTTCGACGGGCTGACGGTCCTCACGTGCGGAAGGGAAGAGCC
CTGGGATGCCGGCCTGTACGTCATTCTCGACCTCCATGGAGCCCCCGGCT
CTCAAAACGGACTGGACAACAGCGGCCTTACCAGCCCCGATCCAAACGAG
ATAGTATGGGGGGAGACGTGGATGTATTCTCCCGAGAACAACGGCAACAC
CGTCCGCATCCTCGCGGCGATGGCGGAGTACATCAACCACATCGAAGACT
CCTTCGGCCTCGACAACATCATGGCGCTCGAGCTCCTGAACGAGCCTTGG
GCACATCTGGACCTCGGCCGCGTGCGTGACTTCTACGTGACGAGCATCAC
GGCGGTGCGGCTGGTGCGGCCCCTGATGCCGATCATCATCCACGACTCCT
TCAGGGGACCCATGTGGGCCACCCTCATGAAGAACTTCCCGTACAAAGAC
ATCGTCATGGACACTCACATCTACCACGGGTTCAACCCGGCCGATCTCTC
TTCGGACACGGCGGTAGGAGACAGGCAGAAGATGTATGTGCATGAGCGTA
TGGCGTGCTCGTACACGTCCATGCTCCGGTACCAGACCTGCGCCGTGCTT
CCGGTTATGGTCGGGGAGTGGTCGCTCGCCGTGGACAACTGTATGCCCTG
GCTAGACTCAAAGTTCGCCGACTTCGGTCAGTGCGATCACCTCGCGGAGA
GGGAAGGGAGCAGCTGGTGGTCCGAACACACGCGGTCCTTCGCCATGAGG
CAGATCGACCGGTACGAGAGGGAGATGGGCTGGGCCTTCTGGACGTGGAA
GCTGGAGGACCACCTCGAGAAAAACGAACCGGCATCCAAGTACTGGTCCT
TCAGCATGGCGGTGGAGCACGGTTTCATCGACTTGGATTTCCCGAACGAC
GCCTGCGTACACCCCCCGGCGACCGATTGGGCGGAGCCCCTCGGCACCGA
CGGCAGCGGCAGTGGAGGGGATGCCAACCTTGTGGCAGCGCAGGCACCGT
CGGGGGTAACGGCCCGTGTGGACGGGAACGCGGCGGCGGCGGTCGGGGTG
TCGCACTCGCCCGAGGAGGCCCAGCGCGGGTCTCAGGAGGGGGCATCCTC
TCCCGGCGCCATGCTGGGCCTGGTGCTGCTCGGAGCCATGGCGGGAGCGT
TGGCCACCTTTCTTCTCGTCCGCCGTAAGGCTGCCTCCCAGGGGGCGTCG
TCGTCGGCAAGCGGTGGCGCAGAGAAGGGCGGCGGCCACAGGGGCGGCGG
CTGGATGCCGGCCGTATTCAGCTCGGGCTACGATACCATCGGCCAGCAAT
CGTTACCCTGA
back to top

protein sequence of Ec-00_002090.1

>Ec-00_002090.1 ID=Ec-00_002090.1|Name=Ec-00_002090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=537bp
MDPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVQPPDGHT
YDCGNMPADWGVSNAADIANLTKTQPSVALKAYGNFVDAVYNTTIGKTAA
ACDFDGLTVLTCGREEPWDAGLYVILDLHGAPGSQNGLDNSGLTSPDPNE
IVWGETWMYSPENNGNTVRILAAMAEYINHIEDSFGLDNIMALELLNEPW
AHLDLGRVRDFYVTSITAVRLVRPLMPIIIHDSFRGPMWATLMKNFPYKD
IVMDTHIYHGFNPADLSSDTAVGDRQKMYVHERMACSYTSMLRYQTCAVL
PVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMR
QIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPND
ACVHPPATDWAEPLGTDGSGSGGDANLVAAQAPSGVTARVDGNAAAAVGV
SHSPEEAQRGSQEGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQGAS
SSASGGAEKGGGHRGGGWMPAVFSSGYDTIGQQSLP*
back to top

mRNA from alignment at chr_00:2385949..2397324+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_002090.1 ID=Ec-00_002090.1|Name=Ec-00_002090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=11376bp|location=Sequence derived from alignment at chr_00:2385949..2397324+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGACCCGGGGAGCTTCCGTTGCAAGCTCGACCCTAAGCTCACGGAGAA
GGACCTTCCCTTCTTCATCCCGGACATCCAGGGCACCTGGGGTTCGGCCT
GCGGACGGAACCGCGGCGTTTTCGTCGTCCAGCCTCCCGATGGCCACACC
TACGGTGAGACAACGGGAGACTAAATAGCTTGCGGCCGGAGTAAAGTTGT
GGGAGTTTCGACTGGCCCTCGCTCGGCAGCTGTCCGTGTGTGTACTTTTT
TATTCGCATCGATATCGCTAACCGGCTGAAGAATGAAAGATTGTCAGTCT
CATTGCGGTTGAGGTCGTGTGTGTGCGATGGGTCAAGTTTCGCGGTGTCT
GTTGTATGGCGGGACCAATAAGAAAAATGTGTTCGAATTTCTCGGTCTAC
AGTGGTAGGATTCACCCGAGGCCACACCTATGATCGAGAGACGGTTCTCC
TGCGGGAAGCCGTCCGTGGGTCGTCGCACACCCGCATGAGGTTCATGCCC
CAGACAACACCCCCCCCGCCCCCGCCCCGGGGGGGCTACGTATTCATGAG
TTCAGCCGGTGTGTTGTCGACGAGTAACTGCGCAAGCATAGCTACCCGCG
CGTGCGCCAGCTGTGGGACCCCCGTGCGATACCCCCGACGACTGGCGCCA
CAAGAGCAGCAAAGCTACGCAAAGTACCGATGGTCCGTTTTTGATACGCG
TGGAATCATTTGCGCAGATTGCGGCAACATGCCTGCCGATTGGGGGGTGT
CTAACGCCGCCGACATCGCCAACCTGACCAAGACCCAGCCGTCCGTCGCG
CTGAAGGCCTACGGTAACTTCGTCGATGCTGTCTACAACACCACCATCGG
GTACGTATTAGGAAGTACGCAAACACCCTGGATAAAGTATGGAGTAGGCT
AAGTTGGAGGTACGGTTAGGGTCTGCGTGCCCCCTGCCTTGTCTTTTTTA
GTAGTAGCCTTGCTTTCTTTGCGGCAGTCTGACGTTTTATCTGGTAAGCG
GTAGGAGGCCGCTGTTGGGGGGATGGTCTATTGAACAACCGAGGCACAAT
GGTCACGCGTCCTTCTTGCGCATGTGCCTCGGCTTTTGGTCAGCAGCATC
GTAAAATGTTGGCGGTAACTATTACTGGAGAGGTTCGCCGTGGAAAAAGT
AATCGTTTGGCTTGAGATTTCCTGTCGTAGGACAAGAGTATGTATGCCAC
GGTGGCCGAGGCATTCATCTGCGAATAACCCCCCCCCTTGAACCTGGTCC
CTTCCTCGGTGTTTGCCATCGGGGTTGGGTTTTCGTCGCTTGGCAGCGAT
GTTGTAAAACAAGCCGATTCACTTCGTGAGCTCGGCGACCAGGTTACCGC
TTTTTTTTTTTTTTGCCTTTGATTTTTTTTGCGGTAACCATAAATGGTGG
TCGAGTAGATTATGCTATAATCGCACGTTGTGTTAAATTGGTCAAACACC
CTCGAGGCAGTTACACAGAGCTTACAATTGTCTCTGGAAGTCAACGCACC
AGAAAATAAATTAAGTCATACGCAGCTGTCATTCGTACGCAAGGAAGTAA
GCACAAGATGCCGAACACCCTTAGCAGGATGCAGCGCACCCTTCATGCGA
CTCGCCGAATACCTCACGGCGCTTCGCGCTTGGTGATGTGAGAGCCTGGT
CCGGTGAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTC
AATGGTCAAACGACTACGGCATGCACGACTATGAGTACACCCCCCCCCCC
CCCCCCCTTGAACCTGGAAGTAGCGATGGAGAGGGTGTACCACCTACTAC
ACACGTTTCCACACGTGTCAGCCCTTTTCTTGCGGCGATGGTCCCGCCGC
GCACCCTCATGCAGGATAGAGAACCAAAACGATTTCTGCTGTGAAGCACA
GCCTCCCCCACCTTTACAGCCTCCCCTACCTTCTTCTCTTGTGCCCTCTA
GAACCGAACCGATGTTGCCATGACTTACAGCCTCCCCCACCCTCTTGTCC
TCTTGTGCCCTCTCCTTCTCTTCGGGGGGTGACGTGTTATGGTTATCGCC
ACAGGAAAACCGCGGCGGCCTGCGACTTCGACGGGCTGACGGTCCTCACG
TGCGGAAGGGAAGAGCCCTGGTGAGTTACTCCGTTTATTGGTTGGCTTGA
AGTGCCTTAGTCCGTTTATAGGTCATAAGTGAGTCCCTGTTTTTGTTATC
TTAAATGCCGTGATCGGAATACTAAGAAATGAAGGCCGAAGAGCAGAACA
CCATAAAGCGAAATCTTTGCCCGGACTGCTTTTCTCGGTTTGGCTAAAAT
TCGGTACCATACTCGCCGCTTGAATGTAGCACCGGCTCGTTGGACGATAA
ACTTGTGACGTAGCGGTGACCACCGATTTTTCTGGGCCCTTTGAGTTCTC
CATGGTTTTTCGTGCTACATATACACACCCTTTCGGGGGGTTGTGAACCC
GTGACCACGAAAGGCGTCCACGTTAGTTGGACCAATCTGCTATCCGATGA
TTGTTTGAAGGTTTTGAGCAGAGATCGGGCCGTTTTTGTGTGTGAATACC
ACAACAACAACAACAATCAAAAGTGGCGGCCTACGTCTCCCTGGTTCCAT
GGCCGGCCAGTCAATGACTTACAACTAAGACATGCAAAATATGAGTACAC
TCCCCCCCCCCCCGGAAAAAACACGACGCCCCCAACCGTCCCAGGAGAAC
TGCCCCATGGTACGACCAGCTCAAAGCGCCCATCCGGGCTGTTAACATCG
GCGGTCTGTTCGTGCTGGAGCGTTGGATTGTGCCCACCTTTACCTCTTGG
GGGGATGACAGCGGCATCCGCGACCAGCACTCTTTCAGCGAGAAGTGTGG
AGAGCTCGGAACGTGTGAACAGCTAAAGGAATTGGAGGGGGCGGGGGGGG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GGTCCCCCTTTAGTGGGCCCATTTTGTTTCCCAAAATTTTTTAAAAGTTT
TGGAGCAGAATTGGGCCCTTTTTGGGGGGGAATTCCCCCACCACCACCAC
CATCAAAAGGGGGGGCCTTCCTTCCCCCGGTTCCCTGGGCGGCCCATCAA
AGGCTTTCCATTTAAACCACCAAAAATAGGGGCCCCCCCCCCCCCCCCCC
GAAAAAAACACGACGCCCCCACCCTTCCCAGGAGAACTCCCCCATGGTAC
GCCCAGCTCAAAGCGCCCTTCCGGGCTGTTAACTTCGGCGGTCTTTTCGT
GCGGGAGCGTTGGATTGTCCCCCCCTTTCCCTCTGGGGGGGATAAAAGCG
GCATCCGCGCCCACCATTCTTTCAGCGAAAAGTGTGGAGAGCTGGAAAGG
TGTAACCAGTTAAAGTTTTTTGGAGGGGGGGGGGGGGGGGGGGGGACACA
ACAGAGCCGACCCGGCGTTTACCGCGGGTGTTCGCTATTGCGGTAGCCCA
TCCATAACCTCCTTTTGCAGTGCGTACCTCCATCGTCACCTGGATGGTTC
GTCGATGTGGAGGATAGACAAGCCTCGTAGGAGTTATGTAGGGGCCAAAG
GCGTTTCGATGGAGAGAAAAAAGCACACCCTGCCGCCGCAATCAAACGCA
AAAGACACAAGACGTGGAGAAAGAAAGCTCTCGGGAAGAGAAGAACCATT
CAAAGAGGTGCTGAGTAAAAGCCTCCTTTCGTCTTTAGCACGCTTGTTTT
TGGGGCCAAAAAATCAAGGTGCAATACAACATAAGTAGACACGTCTACGC
TTGTGGTGTAGTTGTCCTTGCTCTCTATCTTTCGCCAAGAGGACTTGACA
CTTTTTTATGAATGAGAGCACGCGTTACGCAAGGAAATATCGCTTTTGAA
CAAGCCCCCATCGTGCAGGGGGAGACGAGAAACGAAGTGTCGCGCCCCCC
CCCCCCCCCCCCCCCCACCCCCCCCGCTCCCCCCCCCCCCCCCCCCCCCC
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTTC
TCGAGATCGCGGTCGTCGTACGTCTCCTGCGTGGGCGTACAAACCAAGGG
GGGGGGGGGGGGGGGGGGCATCCGCAGTTGGTTAAGCTTTTGCGATGTGC
CTCAGTGGACAACCGGGCACTGCTGTTTTCTCCCGGCGACAAGCGCGCAT
GCTTGTATGTGCATTGTTGTGAACCAATTTTATTTTTTTGTGGGGCGGCC
GGTGCGGGAAGGGGGGGGGTCGTGACCGGTTTGTGCTCGGCGGTGTCGCG
CGAGTGGCGTCACGCCTTCCGTCGAGCCACCTGGGGAAAACACGAGATGG
AGAGACACGCGCGTCAGACTTGTGTCGCAGCCAGGACAGCCGATGTCCTG
ATGAGCCCAAGACCAACACTCGATAAGTAACCACCCAACAACAAAGACGT
CGGTGTGTGTGCTAAATGCGCGACGTTATCGCTCACCCCGTGCCGCCCTT
TTCCTGTCATGTTTTTCCAGGGATGCCGGCCTGTACGTCATTCTCGACCT
CCATGGAGCCCCCGGCTCTCAAAACGGACTGGACAACAGCGGCCTTACCA
GCCCCGATCCAAACGAGATAGTGAGGCCGCGTTTGTTGTTGCTCTTGTGT
GAGCGCGCGTGTGTTTATTTTCGGAATTGGACGAGATGAATCACCCCACA
AGCTTTTTCGGTGGTCGCCATGGGTAGCTCTTGCAGCTTGCCTGTTGTCC
TTGTATTCGTATATCTCGCAGTGGGTGTGTTTGATGCCAAAGCAGGTTGT
TTTATCGTGATTCACTGCCCACACGCAGCAACAGCAGCAGCAGCAGCTGC
ATGATTTATTGCGTTGGCTGTTGTATCCTAGGCCTGGCATCACGATCAAC
TCCTTCACTTCACAAGATACGCACATGTACCACTTTTTCGAGGTGGTGCA
TATAGTACAACGCAAAGCTTCAATCAACGCACCACATTTACCGAGGTAGC
TCAACCGCCCTGCAATGATGTCAAGCTTCGTGGAAAAAACATCCGCCCGC
ACGCCCGCAGGTATGGGGGGAGACGTGGATGTATTCTCCCGAGAACAACG
GCAACACCGTCCGCATCCTCGCGGCGATGGCGGAGTACATCAACCACATC
GAAGACTCCTTCGGCCTCGACAACATCATGGCGCTCGAGCTCCTGAACGA
GCCTTGGGCACATCTGGTGAGATGGATGGCGGCTGATGGGGCTTTCCCTG
CTGTCGTAACGCGCTGTTTGGGTAAATGGTATAGTTGCCGGATGGGGCTT
AAGCTTCTTGCCTGCTGTCGGCAGGGAAAATGAGGGAGGTTTGGTACGGT
TGTAAATGTACCGTTGGGGGGGGGGGGTGGGGGGGCGAAGGATTGGCCTG
GTAGGTCGAAACAAGGGATGGATGGATGGATGGATGTTTTTCTCCCTCCG
TTCAGAGCTTCAAAGATGAAAATTCGGCGATGAACACGACAAGGACTTAA
CAACAACAACAACAACAACAACAACAGCAACAGTAACAGAACAATACCGA
CGACGGCGATAACAACGCAGGACCTCGGCCGCGTGCGTGACTTCTACGTG
ACGAGCATCACGGCGGTGCGGCTGGTGCGGCCCCTGATGCCGATCATCAT
CCACGACTCCTTCAGGGGACCCATGTGGGCCACCCTCATGAAGAACTTCC
CGTACAAAGACATCGTCATGGTGAGGAGATGGTTTGATACGCCGTAGGCA
ATCACGCACCCCTTTTCTTTTTATTGAGAGCTTTCCTGGAAGAGAGTGCA
GCAGAGAAACAAGGCGGTGAAAAGGAGTGCATGTAACCTGGAGTAAACCA
ATGTTTTTTTTTTATCAGGACGAAAGAGAGATGAGGACGGCGTTCCATAA
GGCACAGTCGGGATTATGGTCTGCAGGAATTCGGGATGATGGTCTGCAGA
ACTTCGTCGTAGAAATGGGGAGGTCCGCGCAATCCACGACGTTGCCTCAC
GGTTGTAACAGGAGGCACGCGATTGTTCTGTTGTGTGTGATGATGAATGG
TGAACGCGTGCGTGCGGTGTTTCGCTCACTGTCCTGTTCGTCGTGTTTTG
CGCCGACCCCCGACCCACCCGTCCCCTTTTCCCCCCGAATTCTTCTCCCG
ACCTCATCGGCTTTTCTCCCGCGAACCGTTTTCTTCGTCCGTGCCGGATT
TTTGTTGCTGTTCTGATGTTCGTGATCGGTGTCATCGTAACGACGACCCC
AACGCGGTTATGCCGATGATGATGATGATGACGATGACGATGATCGGGGT
GGTGATGGTGATGGATGATTTTCCGCGGCACAGGACACTCACATCTACCA
CGGGTTCAACCCGGTGAGGCAGCGCTTGATCTTGTTGCTGCTGTTGTTGT
TGGGTTGCTGTCGTTGTCGTTGCTGTCGTTGTCGTCATGGTTTCTTTGTT
GTGATTGTTGTTTTGCGTTGGTGGTGGTTGTCGACAGTTGGCCGCACCAC
GCGCCTGCGTGATTGATCACGCGCGCAGCGTGTGCCTCGCAGTAAGTTTT
GGAAACGTGCATGCTTTGCGAGGCAAACATTCCACCCTCTCCTTTTAATC
CCCTTGAACTTGTGCTTTTTATGTCCCCCTGACTGTGTCCTCGTTCTCGC
CGTGACTACTGCTGTCACGTTCTTCCGTACCTTCCTGACCTCTCCGTGTT
GCGCCTCCTCTGTCCCCGTTCAACTCGACCTTCCTTCGCACACGCCTCGT
TCTGTTCCGCTTTATCTCACCTATTGATTACCGTTGTTGTTGTTGTCGTC
GTCGTCGTGTGGTTTTGTTCATGTTCGTATTTCGGTCTCAGGCCGATCTC
TCTTCGGACACGGCGGTAGGAGACAGGTACGGCGAGACCTTGATTTGGGA
CGGAACGGAATGAGACGGAAAACATGGTACCATGGTATATGGTATTGTCA
TTCAAGTGAAAATGCATTTCCTCACCCTCATGTACGGAAGTATACAAACA
AAGAGCGATGGAAAATCGTCAAGAGTTAGGGATCGTGCCAGTTGTTGTAA
GCATTTCGGGCCATATTTGTAGCACAGCGACTGGTTGTGCCCAAATGCGC
GTATGGATTCCTCTCGTCTCTATCTAGAAGATCGCGCGCGTGGTTGTGGG
TAGCAGATCATTTTTCTCGCCGAACAACGAAAACAACTATAGCTGGTGCA
TCATGAACCCCTTGCCCTCACCCTCACCCACCACTTCAAGGCTGGTATTG
TGTTCACGGACTATTTTTTGTTTTTTTTGCGATAAAAATGGCATGCATGA
CCGGTCATTGTGCAACCGAATTTGTGGTTGGAATCGCCGCATCCAGTCTT
CTCTCGGGCCTAACTATAATAGCGAGGATAAGTCTGGTGACAACACAGCC
CCCCCACCCATGGCCTCCCGGCAACATGCATGCCGGCGGCAGACCAATTT
CGCCCTAACCCCTGGCGCGCGCCCCCTCTCCCTTGCCGGTCATGTCGCTT
TCTCCGGCGTGTGCCGCTGCAGGCAGAAGATGTATGTGCATGAGCGTATG
GCGTGCTCGTACACGTCCATGCTCCGGTACCAGACCTGCGCCGTGCTTCC
GGTTATGGTCGGGGAGTGGTCGCTCGCCGTGGACAACTGTATGCCCTGGC
TAGACTCAAAGTGAGCATGCTCGCTCGTGGTTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGTTGGCGTTGTTGTTCTCTTTGACGCTGTCGTTTTTCGGTT
TTGATTTCACCCAACAAGAGTTCAAAGGGGTTGGTTATTCTGTGTGGGAG
ACCGGTTTACGGATGGGCAGCGATGCTTCGCGCCTTGTGCATGGCGTCCA
TGCGACGACGAGCAACAACAACAAGAGCCGATGCTTCAGTGTATACGTAT
GTGTAGACGGCCTCAAGATAACCCCAGGTCCCGCAGGTTCCTTTCACCAC
TCGCTGCTGTGAAGGTTTTCAACACATCCCCTTGGGCTATATCGAACGGG
TTGCAGTCTTTCAGTGATTGTATATACGGTGGGGGTGGTGAGCCCCTGCC
CGGTATGGTGTCGGTGAAATCGTGTGACAAGGATGGAACATTCAAGTTGT
GTCGTTCTCTGAATGGTGCCGGGTGCCCAGTATAGTTCCTATTAATCTGG
CGGGCACATACCGGCGCTAATGAGGGCCCCCCGCCGTATCGGATATCGTA
CTTTTGTAATTTTGGTAACAAGGAACACCGTTTTGTCCTCTGTCCCTTCC
CCGGTGCCTACAGGTTCGCCGACTTCGGTCAGTGCGATCACCTCGCGGAG
AGGGAAGGGAGCAGCTGGTGGTCCGAACACACGCGGTCCTTCGCCATGAG
GCAGATCGACCGGTACGAGAGGGAGATGGGCTGGGCCTTCTGGACGTGGA
AGCTGGAGGACCACCTCGGTGAGTCGCTCCCCCCCCCCCCCATACATTCC
ACGGGGCCCCTATCTGACTTGCTCGGCTCGCGGTAGCGGGTTCGTTGTTG
CGGATAACCCATTGGTAGTGGACCGGGAAAGGGAGGAGCTGGAGCAGAAG
CCGTGGCATTTGCATACGAGTCGGACATTGCAGGCGCTGATCGAATCAAT
TGCGTGTGTAGACGTCAACCGCTGCGAGGCACACGTTGAGAAAGATTTGA
ACCACACCAACCACGCCCAGCGATGCCTTCATTCCCCTATTGTGTACGTG
ATTCGATGCTGTCTGAGTGCGTCCCCATGTATGGTGGGTCTTTCCTCCTC
CACCGCTCCGTCGCCGCCAGATTCTCGTCGCCTTTTTAAGCAACGCCGAC
ATTTTCCACGTACCCTTCCCCCCCCCCCGGTCAAACCACTAAGGGATGTA
AGACATGAGTACCCCTACCCCTACCCCGACACGACACGACACAACACGAC
ACGACACAGAGAAAAACGAACCGGCATCCAAGTACTGGTCCTTCAGCATG
GCGGTGGAGCACGGTTTCATCGACTTGGATTTCCCGAACGACGCCTGCGT
ACACCCCCCGGCGACCGATTGGGCGGAGCCCCTCGGCACCGACGGCAGCG
GCAGTGGAGGGGATGCCAACCTTGTGGCAGCGCAGGCACCGTCGGGGGTA
ACGGCCCGTGTGGACGGGAACGCGGCGGCGGCGGTCGGGGTGTCGGTGAG
TCTCCTGGGTGGTTGATTTGATTGCGTTTTCGACGCACGGTAGTGTAGTG
AATCCACGCACGCCATTGGTTAATGTTTACAGCAGTGGTGAAGTGGCGGT
ATGGTAATGCGTAATGTTTTTAGTTTGGACACTGCGAGTGACGGGTAGAA
CCGTGTATGACACAAAATAACACACCCACTGAACACATCACCTACCCGCC
CACTCACAAAAACACTACTGTAGCGACAAAAAAAGTTCTTGAGGATCGAC
ATGAGCCCAGAAGCTAAACATACTCTCAGATGACGGTAGTACACTGTAGG
GCGACATGAGATACCACACGCATAAGACCGCACCCGGTCGTAATTTTTAG
TAGCCAAAGTGCTAGATACCACCAAGGGGGGGGGGGGGGGGGGGGGGGGG
GGTCCAAAAAGGGGGCGGGGGAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCCCGACCTCGATACATTTCTTGAC
CCCGGCGTCCCATTTACCGGCGCCCCGTACCCCCTCGGGCCAAATCTTCC
TGTTCCCCTCACTCATTGCCGATCACATTGTGGCTCTTTTTCCAACCGAA
CCATCCCTCCCCTCCGTCATATTTCGACAGCACTCGCCCGAGGAGGCCCA
GCGCGGGTCTCAGGAGGGGGCATCCTCTCCCGGCGCCATGCTGGGCCTGG
TGCTGCTCGGAGCCATGGCGGGAGCGTTGGCCACCTTTCTTCTCGTCCGC
CGTAAGGCTGCCTCCCAGGGGGCGTCGTCGTCGGCAAGCGGTGGCGCAGA
GAAGGGCGGCGGCCACAGGGGCGGCGGCTGGATGCCGGCCGTATTCAGGT
ATGCCTAACTCACCCCTTTTGCTTGTGTTTTGTCGGCGTTTGATGGTGGA
CAGCAGCAGCCGGCCCCCGCAAAAACGGATAACTGATTGGGGGAAGAGAC
GGAGACACGGTAACCTAGCCGGGTTCCTCGCTCATGGAGGGGGGGGGGGG
AGCGAGCGACGGCGAGAGATACATAGGGTACGAGATGTTGATGTCCACGC
CTTGCGGCAAAAGCAAAGGGCAGTCCTGAACATGTTAGGCAGAAGCAACG
TACACGAAGCCTATCACACATGAACTTCAACAGGATCCAGTAGACTAAGT
TTAACTGGCTGGATTCCGTCGCAGAATAAGATATTGACCCTCAACCCGAT
GTTTACGTTTTGAAAATTGCGGGAGCCAACTGCTGTACCCGGTCCCTTGT
AAACCTGGTCCCAAAGTATTGAGGTCGCTGGCGAAACCAAGAGCTCAGTT
GTGTTCGTTCCTTACGAAACGCACCAAACCTCAACACCCTTTCCTGTTTC
GCCCGGATGTCGGTTTTTTTTTGCGTCTCGGCGCAGCTCGGGCTACGATA
CCATCGGCCAGCAATCGTTACCCTGA
back to top

Coding sequence (CDS) from alignment at chr_00:2385949..2397324+

>Ec-00_002090.1 ID=Ec-00_002090.1|Name=Ec-00_002090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1611bp|location=Sequence derived from alignment at chr_00:2385949..2397324+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGACCCGGGGAGCTTCCGTTGCAAGCTCGACCCTAAGCTCACGGAGAA
GGACCTTCCCTTCTTCATCCCGGACATCCAGGGCACCTGGGGTTCGGCCT
GCGGACGGAACCGCGGCGTTTTCGTCGTCCAGCCTCCCGATGGCCACACC
TACGATTGCGGCAACATGCCTGCCGATTGGGGGGTGTCTAACGCCGCCGA
CATCGCCAACCTGACCAAGACCCAGCCGTCCGTCGCGCTGAAGGCCTACG
GTAACTTCGTCGATGCTGTCTACAACACCACCATCGGGAAAACCGCGGCG
GCCTGCGACTTCGACGGGCTGACGGTCCTCACGTGCGGAAGGGAAGAGCC
CTGGGATGCCGGCCTGTACGTCATTCTCGACCTCCATGGAGCCCCCGGCT
CTCAAAACGGACTGGACAACAGCGGCCTTACCAGCCCCGATCCAAACGAG
ATAGTATGGGGGGAGACGTGGATGTATTCTCCCGAGAACAACGGCAACAC
CGTCCGCATCCTCGCGGCGATGGCGGAGTACATCAACCACATCGAAGACT
CCTTCGGCCTCGACAACATCATGGCGCTCGAGCTCCTGAACGAGCCTTGG
GCACATCTGGACCTCGGCCGCGTGCGTGACTTCTACGTGACGAGCATCAC
GGCGGTGCGGCTGGTGCGGCCCCTGATGCCGATCATCATCCACGACTCCT
TCAGGGGACCCATGTGGGCCACCCTCATGAAGAACTTCCCGTACAAAGAC
ATCGTCATGGACACTCACATCTACCACGGGTTCAACCCGGCCGATCTCTC
TTCGGACACGGCGGTAGGAGACAGGCAGAAGATGTATGTGCATGAGCGTA
TGGCGTGCTCGTACACGTCCATGCTCCGGTACCAGACCTGCGCCGTGCTT
CCGGTTATGGTCGGGGAGTGGTCGCTCGCCGTGGACAACTGTATGCCCTG
GCTAGACTCAAAGTTCGCCGACTTCGGTCAGTGCGATCACCTCGCGGAGA
GGGAAGGGAGCAGCTGGTGGTCCGAACACACGCGGTCCTTCGCCATGAGG
CAGATCGACCGGTACGAGAGGGAGATGGGCTGGGCCTTCTGGACGTGGAA
GCTGGAGGACCACCTCGAGAAAAACGAACCGGCATCCAAGTACTGGTCCT
TCAGCATGGCGGTGGAGCACGGTTTCATCGACTTGGATTTCCCGAACGAC
GCCTGCGTACACCCCCCGGCGACCGATTGGGCGGAGCCCCTCGGCACCGA
CGGCAGCGGCAGTGGAGGGGATGCCAACCTTGTGGCAGCGCAGGCACCGT
CGGGGGTAACGGCCCGTGTGGACGGGAACGCGGCGGCGGCGGTCGGGGTG
TCGCACTCGCCCGAGGAGGCCCAGCGCGGGTCTCAGGAGGGGGCATCCTC
TCCCGGCGCCATGCTGGGCCTGGTGCTGCTCGGAGCCATGGCGGGAGCGT
TGGCCACCTTTCTTCTCGTCCGCCGTAAGGCTGCCTCCCAGGGGGCGTCG
TCGTCGGCAAGCGGTGGCGCAGAGAAGGGCGGCGGCCACAGGGGCGGCGG
CTGGATGCCGGCCGTATTCAGCTCGGGCTACGATACCATCGGCCAGCAAT
CGTTACCCTGA
back to top
Synonyms
The feature 'Ec-00_002090.1' has the following synonyms
Synonym
Esi0013_0217
Esi_0013_0217