Ec-00_002580.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_002580.1
Unique NameEc-00_002580.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length58
Homology
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BLAST of Ec-00_002580.1 vs. uniprot
Match: D7G4V1_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V1_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 2.900e-26
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 
Query:    1 MVFNEQAKVLLMVANLLLPWSTRAFVLHCNANQRSVLGRHEGVVMMETLHGN 52
            MVFNEQAKVLLMVANLLLPWSTRAFVLHCNANQRSVLGRHEGVVMMETLHGN
Sbjct:    1 MVFNEQAKVLLMVANLLLPWSTRAFVLHCNANQRSVLGRHEGVVMMETLHGN 52
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BLAST of Ec-00_002580.1 vs. uniprot
Match: A0A6H5JW52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW52_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 8.020e-24
Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0 
Query:    1 MVFNEQAKVLLMVANLLLPWSTRAFVLHCNANQRSVLGRHEGVVMMETLHGN 52
            MV NEQAKVLLMV NLLLPWSTRAFVLHC+ANQRSVLGRHEGVVMME LHGN
Sbjct:    1 MVLNEQAKVLLMVVNLLLPWSTRAFVLHCSANQRSVLGRHEGVVMMEMLHGN 52
The following BLAST results are available for this feature:
BLAST of Ec-00_002580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4V1_ECTSI2.900e-26100.00Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JW52_9PHAE8.020e-2492.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..57
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.643

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:2778458..2778822 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_002580.1Ec-00_002580.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 2778458..2778822 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_002580.1 ID=Ec-00_002580.1|Name=Ec-00_002580.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=58bp
MVFNEQAKVLLMVANLLLPWSTRAFVLHCNANQRSVLGRHEGVVMMETLH
GNVTWLF*
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