Ec-00_001710.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_001710.1
Unique NameEc-00_001710.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length268
Homology
[Close]
BLAST of Ec-00_001710.1 vs. uniprot
Match: D8LEC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC3_ECTSI)

HSP 1 Score: 528 bits (1359), Expect = 2.640e-189
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0 
Query:    1 MVLWRWGVAVLLALLSCSTTNAGRSTGGSGDPMDLLSSVSGTYTHFVDDDLSVTVSYDLQDDSSIPFSYLTGVSVTKAQDLYRKTAPTEPLARLTLTGSALIKQRLPSGGAMIDTGNKTVGININHAARRAQFRFTRAFMDGRFKVGLNPVVTYGALRRRRVNFSTLVPPYRPFLSESGLPSMSLQQRSVVWDWAQGMPSISPLHGLGVALRLHTGRRALLSATLFDGTDRSRLWSVRADVPLAKPSNTCFTAERAWQVPTTNTGAR 267
            MVLWRWGVAVLLALLSCSTTNAGRSTGGSGDPMDLLSSVSGTYTHFVDDDLSVTVSYDLQDDSSIPFSYLTGVSVTKAQDLYRKTAPTEPLARLTLTGSALIKQRLPSGGAMIDTGNKTVGININHAARRAQFRFTRAFMDGRFKVGLNPVVTYGALRRRRVNFSTLVPPYRPFLSESGLPSMSLQQRSVVWDWAQGMPSISPLHGLGVALRLHTGRRALLSATLFDGTDRSRLWSVRADVPLAKPSNTCFTAERAWQVPTTNTGAR
Sbjct:    1 MVLWRWGVAVLLALLSCSTTNAGRSTGGSGDPMDLLSSVSGTYTHFVDDDLSVTVSYDLQDDSSIPFSYLTGVSVTKAQDLYRKTAPTEPLARLTLTGSALIKQRLPSGGAMIDTGNKTVGININHAARRAQFRFTRAFMDGRFKVGLNPVVTYGALRRRRVNFSTLVPPYRPFLSESGLPSMSLQQRSVVWDWAQGMPSISPLHGLGVALRLHTGRRALLSATLFDGTDRSRLWSVRADVPLAKPSNTCFTAERAWQVPTTNTGAR 267
[Close]
BLAST of Ec-00_001710.1 vs. uniprot
Match: A0A6H5J9R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9R3_9PHAE)

HSP 1 Score: 386 bits (992), Expect = 6.670e-134
Identity = 193/195 (98.97%), Postives = 195/195 (100.00%), Query Frame = 0 
Query:   73 VSVTKAQDLYRKTAPTEPLARLTLTGSALIKQRLPSGGAMIDTGNKTVGININHAARRAQFRFTRAFMDGRFKVGLNPVVTYGALRRRRVNFSTLVPPYRPFLSESGLPSMSLQQRSVVWDWAQGMPSISPLHGLGVALRLHTGRRALLSATLFDGTDRSRLWSVRADVPLAKPSNTCFTAERAWQVPTTNTGAR 267
            VSVTKAQDLYRKTAPTEPLARLTLTGSALIKQRLPSGGAMIDTGNKTVGININHA+RRAQFRFTRAFMDGRFKVGLNPVVTYGALRRRRVNFSTLVPPYRPFLSESGLPSMSLQQRSVVWDWAQGMPSISPL+GLGVALRLHTGRRALLSATLFDGTDRSRLWSVRADVPLAKPSNTCFTAERAWQVPTTNTGAR
Sbjct:   40 VSVTKAQDLYRKTAPTEPLARLTLTGSALIKQRLPSGGAMIDTGNKTVGININHASRRAQFRFTRAFMDGRFKVGLNPVVTYGALRRRRVNFSTLVPPYRPFLSESGLPSMSLQQRSVVWDWAQGMPSISPLNGLGVALRLHTGRRALLSATLFDGTDRSRLWSVRADVPLAKPSNTCFTAERAWQVPTTNTGAR 234
[Close]
BLAST of Ec-00_001710.1 vs. uniprot
Match: A0A6H5JDN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN2_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 5.450e-37
Identity = 69/72 (95.83%), Postives = 69/72 (95.83%), Query Frame = 0 
Query:    1 MVLWRWGVAVLLALLSCSTTNAGRSTGGSGDPMDLLSSVSGTYTHFVDDDLSVTVSYDLQDDSSIPFSYLTG 72
            MVLWRWGVA LLALLSCSTTNAGRST GS DPMDLLSSVSGTYTHFVDDDLSVTVSYDLQDDSSIPFSYLTG
Sbjct:    1 MVLWRWGVAGLLALLSCSTTNAGRSTAGSNDPMDLLSSVSGTYTHFVDDDLSVTVSYDLQDDSSIPFSYLTG 72
The following BLAST results are available for this feature:
BLAST of Ec-00_001710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LEC3_ECTSI2.640e-189100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9R3_9PHAE6.670e-13498.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDN2_9PHAE5.450e-3795.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..267
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.895

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1932985..1936552 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001710.1Ec-00_001710.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 1931571..1936651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_001710.1 ID=Ec-00_001710.1|Name=Ec-00_001710.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=268bp
MVLWRWGVAVLLALLSCSTTNAGRSTGGSGDPMDLLSSVSGTYTHFVDDD
LSVTVSYDLQDDSSIPFSYLTGVSVTKAQDLYRKTAPTEPLARLTLTGSA
LIKQRLPSGGAMIDTGNKTVGININHAARRAQFRFTRAFMDGRFKVGLNP
VVTYGALRRRRVNFSTLVPPYRPFLSESGLPSMSLQQRSVVWDWAQGMPS
ISPLHGLGVALRLHTGRRALLSATLFDGTDRSRLWSVRADVPLAKPSNTC
FTAERAWQVPTTNTGAR*
back to top