Ec-00_001610.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-00_001610.1
Unique Name	Ec-00_001610.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	613

Homology

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BLAST of Ec-00_001610.1 vs. uniprot
Match: D8LEB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB4_ECTSI)

HSP 1 Score: 1190 bits (3079), Expect = 0.000e+0
Identity = 612/612 (100.00%), Postives = 612/612 (100.00%), Query Frame = 0

Query:    1 MAIEMPDDDDRGAALLISSAAHWLEFLPAEGVAMCCGVCAGLKQAAEEDRLWKDLCHRRWRRVNVDVARPNNRKCDGGGSVIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAVTGRRFTRGAQGVAPGGGPATNISGMDVGPCRVVVCSADFAWYYNVRQGSNTSRQRRQQPRDATSDSASIDSXXXXXXXXXXXXXXXXXXXXXXXXXSSRTLRGFQLPSSGVTEARYSGDGERCFFGTVSGHIFVHKCGGDDDDKDGERHRSSEAVEPWTPTLALSSPTGSPVAVRQVVARFEGGCPGGSRLGVLCRPTLVWQPNLEGSGEGGYLFLVDTQAQAVTRQMNLGGGSLGGLTFPTMERGGAAVSMAPLSSEGMPFGSSGSGELFAVGFAGGTVAVFDARCHEGGGMVGGFTTRHRWLKRLRSAGPLLMNSYGRTKNIETWDMRRLPSRATHEPPPGLPSPRLRAPPCLADLACPANSPDFWVEPHGLCVAVHGAPRHSQRFGAKHAFWPWPRQTGGVATVSTDPNAPACSARGDGGGVEIPGRCVVVPGVVNDSGYRMCLSTGVKFTDTHMATVLDSSRVLVDEMAVMPRVSRGSGDREGAGVTSLFLAA 612
            MAIEMPDDDDRGAALLISSAAHWLEFLPAEGVAMCCGVCAGLKQAAEEDRLWKDLCHRRWRRVNVDVARPNNRKCDGGGSVIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAVTGRRFTRGAQGVAPGGGPATNISGMDVGPCRVVVCSADFAWYYNVRQGSNTSRQRRQQPRDATSDSASIDSXXXXXXXXXXXXXXXXXXXXXXXXXSSRTLRGFQLPSSGVTEARYSGDGERCFFGTVSGHIFVHKCGGDDDDKDGERHRSSEAVEPWTPTLALSSPTGSPVAVRQVVARFEGGCPGGSRLGVLCRPTLVWQPNLEGSGEGGYLFLVDTQAQAVTRQMNLGGGSLGGLTFPTMERGGAAVSMAPLSSEGMPFGSSGSGELFAVGFAGGTVAVFDARCHEGGGMVGGFTTRHRWLKRLRSAGPLLMNSYGRTKNIETWDMRRLPSRATHEPPPGLPSPRLRAPPCLADLACPANSPDFWVEPHGLCVAVHGAPRHSQRFGAKHAFWPWPRQTGGVATVSTDPNAPACSARGDGGGVEIPGRCVVVPGVVNDSGYRMCLSTGVKFTDTHMATVLDSSRVLVDEMAVMPRVSRGSGDREGAGVTSLFLAA
Sbjct:    1 MAIEMPDDDDRGAALLISSAAHWLEFLPAEGVAMCCGVCAGLKQAAEEDRLWKDLCHRRWRRVNVDVARPNNRKCDGGGSVIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAVTGRRFTRGAQGVAPGGGPATNISGMDVGPCRVVVCSADFAWYYNVRQGSNTSRQRRQQPRDATSDSASIDSXXXXXXXXXXXXXXXXXXXXXXXXXSSRTLRGFQLPSSGVTEARYSGDGERCFFGTVSGHIFVHKCGGDDDDKDGERHRSSEAVEPWTPTLALSSPTGSPVAVRQVVARFEGGCPGGSRLGVLCRPTLVWQPNLEGSGEGGYLFLVDTQAQAVTRQMNLGGGSLGGLTFPTMERGGAAVSMAPLSSEGMPFGSSGSGELFAVGFAGGTVAVFDARCHEGGGMVGGFTTRHRWLKRLRSAGPLLMNSYGRTKNIETWDMRRLPSRATHEPPPGLPSPRLRAPPCLADLACPANSPDFWVEPHGLCVAVHGAPRHSQRFGAKHAFWPWPRQTGGVATVSTDPNAPACSARGDGGGVEIPGRCVVVPGVVNDSGYRMCLSTGVKFTDTHMATVLDSSRVLVDEMAVMPRVSRGSGDREGAGVTSLFLAA 612

[Close]

BLAST of Ec-00_001610.1 vs. uniprot
Match: A0A6H5KAW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW4_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 2.460e-40
Identity = 69/72 (95.83%), Postives = 70/72 (97.22%), Query Frame = 0

Query:   44 QAAEEDRLWKDLCHRRWRRVNVDVARPNNRKCDGGGSVIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAV 115
            QAA+EDRLWKDLCHRRWRRVNVDVARPNNR CDGGG VIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAV
Sbjct:    4 QAAQEDRLWKDLCHRRWRRVNVDVARPNNRTCDGGGGVIGGHQAAYASLNGWRDPTNRLRRTILSTAPNDAV 75

The following BLAST results are available for this feature:

BLAST of Ec-00_001610.1 vs. uniprot

BLAST of Ec-00_001610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LEB4_ECTSI	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KAW4_9PHAE	2.460e-40	95.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 12..90 e-value: 3.7E-5 score: 25.6
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 24..68

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:1842526..1847927 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_001610.1	Ec-00_001610.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_00 1842526..1847927 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-00_001610.1 ID=Ec-00_001610.1|Name=Ec-00_001610.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=613bp
MAIEMPDDDDRGAALLISSAAHWLEFLPAEGVAMCCGVCAGLKQAAEEDR
LWKDLCHRRWRRVNVDVARPNNRKCDGGGSVIGGHQAAYASLNGWRDPTN
RLRRTILSTAPNDAVTGRRFTRGAQGVAPGGGPATNISGMDVGPCRVVVC
SADFAWYYNVRQGSNTSRQRRQQPRDATSDSASIDSGGGGGQNGGGGAAE
SIVESSSGAGGSSRTLRGFQLPSSGVTEARYSGDGERCFFGTVSGHIFVH
KCGGDDDDKDGERHRSSEAVEPWTPTLALSSPTGSPVAVRQVVARFEGGC
PGGSRLGVLCRPTLVWQPNLEGSGEGGYLFLVDTQAQAVTRQMNLGGGSL
GGLTFPTMERGGAAVSMAPLSSEGMPFGSSGSGELFAVGFAGGTVAVFDA
RCHEGGGMVGGFTTRHRWLKRLRSAGPLLMNSYGRTKNIETWDMRRLPSR
ATHEPPPGLPSPRLRAPPCLADLACPANSPDFWVEPHGLCVAVHGAPRHS
QRFGAKHAFWPWPRQTGGVATVSTDPNAPACSARGDGGGVEIPGRCVVVP
GVVNDSGYRMCLSTGVKFTDTHMATVLDSSRVLVDEMAVMPRVSRGSGDR
EGAGVTSLFLAA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf