Ec-00_001090.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_001090.1
Unique NameEc-00_001090.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length214
Homology
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BLAST of Ec-00_001090.1 vs. uniprot
Match: A0A6H5K800_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K800_9PHAE)

HSP 1 Score: 394 bits (1011), Expect = 3.650e-138
Identity = 197/208 (94.71%), Postives = 201/208 (96.63%), Query Frame = 0 
Query:    1 MATRGLLRYCGLRSATRRLSYYHKGGTSCEPDEELHPNWSGLERRLQSRVPREKGHGVPEGRTNLKPSEEDFWHKAGVYDYSEASSARPSPEVATRGPACARLSTVKVSAENVPRVVALYKTSVAPVLQVKGFCGAQVFSDRATGTVQSLTLWQSWGDLETAVGDSRYAKAMRSLEGLIEAPPDVVDTEVACSILPTTGGGDVSSGDS 208
            MATRGLLRYCG RSATRRLSY+HKGGTSCEPDEELHPNWSGLERRLQSRVPREKGHGVPEGRTNLKPSEEDFWHKAGVYDYSEASS+  SPE+ATR PACARLSTVKVSAENVPRVVALYKTSVAPVLQVKGFCGAQVFSDRA GTVQSLTLWQSWGDLE  VG+SRYAKAMRSLEGLIEAPPDVVDTEVACSILPTTGGGDVSSGDS
Sbjct:    1 MATRGLLRYCGRRSATRRLSYHHKGGTSCEPDEELHPNWSGLERRLQSRVPREKGHGVPEGRTNLKPSEEDFWHKAGVYDYSEASSS--SPEIATREPACARLSTVKVSAENVPRVVALYKTSVAPVLQVKGFCGAQVFSDRAAGTVQSLTLWQSWGDLEEVVGNSRYAKAMRSLEGLIEAPPDVVDTEVACSILPTTGGGDVSSGDS 206
The following BLAST results are available for this feature:
BLAST of Ec-00_001090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K800_9PHAE3.650e-13894.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.100coord: 100..193
e-value: 4.2E-5
score: 25.6
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 101..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1374443..1377088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001090.1Ec-00_001090.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 1373905..1377161 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_001090.1 ID=Ec-00_001090.1|Name=Ec-00_001090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=214bp
MATRGLLRYCGLRSATRRLSYYHKGGTSCEPDEELHPNWSGLERRLQSRV
PREKGHGVPEGRTNLKPSEEDFWHKAGVYDYSEASSARPSPEVATRGPAC
ARLSTVKVSAENVPRVVALYKTSVAPVLQVKGFCGAQVFSDRATGTVQSL
TLWQSWGDLETAVGDSRYAKAMRSLEGLIEAPPDVVDTEVACSILPTTGG
GDVSSGDSEEDAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011008Dimeric_a/b-barrel