Ec-00_000650.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_000650.1
Unique NameEc-00_000650.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length49
Homology
BLAST of Ec-00_000650.1 vs. uniprot
Match: D7FI15_ECTSI (zf-rbx1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI15_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 6.010e-30
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0
Query:    1 MEDMKPREKITRLPACLHTFHSKCISKWLKEKPCCPIDKVAVSVNDSG 48
            MEDMKPREKITRLPACLHTFHSKCISKWLKEKPCCPIDKVAVSVNDSG
Sbjct:    1 MEDMKPREKITRLPACLHTFHSKCISKWLKEKPCCPIDKVAVSVNDSG 48          
BLAST of Ec-00_000650.1 vs. uniprot
Match: A0A6H5JDI2_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDI2_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 4.610e-26
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0
Query:    1 MEDMKPREKITRLPACLHTFHSKCISKWLKEKPCCPIDKVAVSVNDSG 48
            MEDMKPREKITRLPACLHTFHSKCISKWLKEKPCCPIDKVAVSVNDSG
Sbjct:  821 MEDMKPREKITRLPACLHTFHSKCISKWLKEKPCCPIDKVAVSVNDSG 868          
BLAST of Ec-00_000650.1 vs. uniprot
Match: A0A022R3W6_ERYGU (RING-type domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022R3W6_ERYGU)

HSP 1 Score: 49.7 bits (117), Expect = 7.230e-6
Identity = 15/48 (31.25%), Postives = 29/48 (60.42%), Query Frame = 0
Query:    1 MEDMKPREKITRLPACLHTFHSKCISKWLKEKPCCPIDKVAVSVNDSG 48
            ++  +  E    +P C H FH+KC+ +W+++KP CP+ +  V  + +G
Sbjct:  108 LDSFREGEACRNIPVCKHVFHAKCVDRWIRKKPTCPVCRTRVDPDPAG 155          
BLAST of Ec-00_000650.1 vs. uniprot
Match: A0A0A9JHP3_ARUDO (RING-type domain-containing protein n=2 Tax=Arundo donax TaxID=35708 RepID=A0A0A9JHP3_ARUDO)

HSP 1 Score: 48.1 bits (113), Expect = 8.980e-6
Identity = 18/38 (47.37%), Postives = 23/38 (60.53%), Query Frame = 0
Query:    4 MKPREKITRLPACLHTFHSKCISKWLKEKPCCPIDKVA 41
            M+  + +  LP C H FH KCI KWLK  P CP+ + A
Sbjct:   49 MREEQALRELPRCGHRFHDKCIGKWLKAHPTCPVCRAA 86          
BLAST of Ec-00_000650.1 vs. uniprot
Match: A0A814Q070_ADIRI (Hypothetical protein n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A814Q070_ADIRI)

HSP 1 Score: 49.7 bits (117), Expect = 9.890e-6
Identity = 20/34 (58.82%), Postives = 22/34 (64.71%), Query Frame = 0
Query:    3 DMKPREKITRLPACLHTFHSKCISKWLKEKPCCP 36
            D+ P   +  L  C H FHSKCI KW KEKPCCP
Sbjct:  146 DLNP---VKTLDQCQHRFHSKCIEKWFKEKPCCP 176          
BLAST of Ec-00_000650.1 vs. uniprot
Match: A0A251VKC9_HELAN (Putative zinc finger, RING/FYVE/PHD-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VKC9_HELAN)

HSP 1 Score: 48.9 bits (115), Expect = 1.120e-5
Identity = 19/37 (51.35%), Postives = 23/37 (62.16%), Query Frame = 0
Query:    1 MEDMKPREKITRLPACLHTFHSKCISKWLKEKPCCPI 37
            + D KP + I  LP C H FH KCI KWL+  P CP+
Sbjct:  110 LADYKPADVIRLLPECGHLFHRKCIDKWLRVHPTCPV 146          
BLAST of Ec-00_000650.1 vs. uniprot
Match: A0A814RVU2_ADIRI (E3 ubiquitin-protein ligase n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814RVU2_ADIRI)

HSP 1 Score: 49.7 bits (117), Expect = 1.330e-5
Identity = 20/34 (58.82%), Postives = 22/34 (64.71%), Query Frame = 0
Query:    3 DMKPREKITRLPACLHTFHSKCISKWLKEKPCCP 36
            D+ P   +  L  C H FHSKCI KW KEKPCCP
Sbjct:  146 DLNP---VKTLDQCQHRFHSKCIEKWFKEKPCCP 176          
BLAST of Ec-00_000650.1 vs. uniprot
Match: A0A819V0Y1_9BILA (Hypothetical protein n=2 Tax=Rotaria TaxID=231623 RepID=A0A819V0Y1_9BILA)

HSP 1 Score: 49.3 bits (116), Expect = 1.380e-5
Identity = 19/34 (55.88%), Postives = 21/34 (61.76%), Query Frame = 0
Query:   13 LPACLHTFHSKCISKWLKEKPCCPIDKVAVSVND 46
            L  C H FHSKCI KW KEKPCCP  +     +D
Sbjct:  154 LDICQHRFHSKCIEKWFKEKPCCPCCRHVYQTHD 187          
BLAST of Ec-00_000650.1 vs. uniprot
Match: A0A821SMJ0_9BILA (Hypothetical protein n=7 Tax=Rotaria TaxID=231623 RepID=A0A821SMJ0_9BILA)

HSP 1 Score: 48.9 bits (115), Expect = 1.920e-5
Identity = 18/24 (75.00%), Postives = 18/24 (75.00%), Query Frame = 0
Query:   13 LPACLHTFHSKCISKWLKEKPCCP 36
            L  C H FHSKCI KW KEKPCCP
Sbjct:  154 LDICQHRFHSKCIEKWFKEKPCCP 177          
BLAST of Ec-00_000650.1 vs. uniprot
Match: A0A814JFW3_9BILA (Hypothetical protein n=2 Tax=Adineta steineri TaxID=433720 RepID=A0A814JFW3_9BILA)

HSP 1 Score: 48.1 bits (113), Expect = 3.670e-5
Identity = 17/27 (62.96%), Postives = 19/27 (70.37%), Query Frame = 0
Query:   10 ITRLPACLHTFHSKCISKWLKEKPCCP 36
            +  L  C H FH+KCI KW KEKPCCP
Sbjct:  150 VKTLDKCQHRFHTKCIEKWFKEKPCCP 176          
The following BLAST results are available for this feature:
BLAST of Ec-00_000650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7FI15_ECTSI6.010e-30100.00zf-rbx1 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JDI2_9PHAE4.610e-26100.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A022R3W6_ERYGU7.230e-631.25RING-type domain-containing protein n=1 Tax=Erythr... [more]
A0A0A9JHP3_ARUDO8.980e-647.37RING-type domain-containing protein n=2 Tax=Arundo... [more]
A0A814Q070_ADIRI9.890e-658.82Hypothetical protein n=1 Tax=Adineta ricciae TaxID... [more]
A0A251VKC9_HELAN1.120e-551.35Putative zinc finger, RING/FYVE/PHD-type n=1 Tax=H... [more]
A0A814RVU2_ADIRI1.330e-558.82E3 ubiquitin-protein ligase n=2 Tax=Adineta riccia... [more]
A0A819V0Y1_9BILA1.380e-555.88Hypothetical protein n=2 Tax=Rotaria TaxID=231623 ... [more]
A0A821SMJ0_9BILA1.920e-575.00Hypothetical protein n=7 Tax=Rotaria TaxID=231623 ... [more]
A0A814JFW3_9BILA3.670e-562.96Hypothetical protein n=2 Tax=Adineta steineri TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..43
e-value: 1.2E-12
score: 49.2
IPR024766Zinc finger, RING-H2-typePFAMPF12678zf-rbx1coord: 13..39
e-value: 9.9E-10
score: 38.6
NoneNo IPR availablePANTHERPTHR45931FAMILY NOT NAMEDcoord: 2..45
NoneNo IPR availablePANTHERPTHR45931:SF8coord: 2..45
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:888741..889354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_000650.1Ec-00_000650.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 887583..889939 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_000650.1 ID=Ec-00_000650.1|Name=Ec-00_000650.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=49bp
MEDMKPREKITRLPACLHTFHSKCISKWLKEKPCCPIDKVAVSVNDSG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR024766Znf_RING_H2