Ec-28_003660.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_003660.1
Unique NameEc-28_003660.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length354
Homology
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BLAST of Ec-28_003660.1 vs. uniprot
Match: A0A6H5JX54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX54_9PHAE)

HSP 1 Score: 554 bits (1428), Expect = 4.100e-197
Identity = 288/314 (91.72%), Postives = 298/314 (94.90%), Query Frame = 1 
Query:  118 DREESLLTSWPLMGDGRVEMSSARSASAAETAAVVHGVMNEGLEGEDLWPTVPAEAGGRRGQEDEEKTADVVVQEQGVVSRDEDGLASIRRLAINFTDLYPNCTSLAYYDDSVPGDNYCNSYYNNAECGYDGGDCCDCDCGTFGTSLDSSSSTTFSSSNFTCGANGYVCVDPASECFEDLYPDCVSRGGTLEWIGNGACYWGNNFEECGYDGGDCCECDCESTLESHCGVNGYDCADPSSPSECIEDVPTPSPQEQXXXXXXXXXXXAVSSEDGDSDDTFVRDIIIGVISTVVGGVALALVTKYCLGERASSAG 1059
            D EE LLTSW L+ DGR +MSSARS SAAE AAVVH  MN+GLEGE++WPTVPAEAG R+G+ DEEKTADVVV EQGVVSRDEDGLASIRRLAINFTDLYPNCTSLAYYDDSVPGDNYCNSYYNNAECGYDGGDCC+CDCGTFGTSLDSSSST+ SS+NFTCGANGYVCVDPASECFEDLYPDCVSRGGTLEWIGNGACYWGNNFEECGYDGGDCCECDCESTLESHCGVNGYDCADPSSPSEC EDVPTPSPQE XXXXXXXXXXXAVSSEDGDSDDTFVRDI IGVISTVVGGVALALVTKYCLGERASSAG
Sbjct:   32 DPEEPLLTSWSLIDDGRGDMSSARSGSAAEAAAVVHDAMNDGLEGEEMWPTVPAEAGRRQGEADEEKTADVVV-EQGVVSRDEDGLASIRRLAINFTDLYPNCTSLAYYDDSVPGDNYCNSYYNNAECGYDGGDCCECDCGTFGTSLDSSSSTS-SSANFTCGANGYVCVDPASECFEDLYPDCVSRGGTLEWIGNGACYWGNNFEECGYDGGDCCECDCESTLESHCGVNGYDCADPSSPSECTEDVPTPSPQEXXXXXXXXXXXXAVSSEDGDSDDTFVRDISIGVISTVVGGVALALVTKYCLGERASSAG 343
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BLAST of Ec-28_003660.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 5.190e-21
Identity = 66/153 (43.14%), Postives = 76/153 (49.67%), Query Frame = 1 
Query:  463 DNYCNSYYNNAECGYDGGDCCDCDCGTFGTSLDSSSSTTFSSSNFTCG--ANGYVCVDP---------ASECFEDLYPDCVSRGGTLEWIGNGACYWGNNFEECGYDGGDCCECDCESTLE----SHCGVNGYDCADPSSPSECIEDVPTPSP 876
            D YC++  NNAECG+DGGDCC C CG+     DS            CG   +GY C+DP          S      YPDC       EW  +G C    N  ECGYDGGDCC C C         ++CG  GYDC DP +PS C  D PTPSP
Sbjct:   76 DGYCDTDLNNAECGWDGGDCCACTCGS-----DSDEELAHP-----CGQLGDGYDCLDPDVPDDCGVTPSPAAAIGYPDCEEY--LYEWQ-DGVCDDNLNTAECGYDGGDCCRCTCRDYNSWGYYTNCGYYGYDCMDPDAPSSCSTDSPTPSP 215
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BLAST of Ec-28_003660.1 vs. uniprot
Match: A0A6H5J6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K0_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 3.080e-20
Identity = 66/152 (43.42%), Postives = 73/152 (48.03%), Query Frame = 1 
Query:  463 DNYCNSYYNNAECGYDGGDCCDCDCGTFGTSLDSSSSTTFSSSNFTCG--ANGYVCVDP---------ASECFEDLYPDCVSRGGTLEWIGNGACYWGNNFEECGYDGGDCCECDCESTLE---SHCGVNGYDCADPSSPSECIEDVPTPSP 876
            D YC++  NNAECG+DGGDCC C CG      DS            CG   +GY C+DP          S      YPDC       EW  +G C    N   CGYDGGDCC C C        S CG  GYDC DP +PS C  D PTPSP
Sbjct:   76 DGYCDTDLNNAECGWDGGDCCACTCGA-----DSDEELAHP-----CGQLGDGYNCLDPDVPDDCGVTPSPAAAIGYPDCEEY--LYEWQ-DGVCDDNLNTAACGYDGGDCCRCTCRDYSSWGYSTCGYYGYDCMDPDAPSACSTDSPTPSP 214
[Close]
BLAST of Ec-28_003660.1 vs. uniprot
Match: D7FX76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX76_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 2.520e-19
Identity = 64/187 (34.22%), Postives = 85/187 (45.45%), Query Frame = 1 
Query:  406 TDLYPNCTSLAYYDDSVPGDNYCNSYYNNAECGYDGGDCCDCDCGTFGTSLDSSSSTTFSSSNFTCG--ANGYVCVDPAS---------------------------------ECFEDLYPDCVSRGGTLEWIGNGACYWGNNFEECGYDGGDCCECDC--ESTLESHCGV--NGYDCADPSSPSEC 849
            T LYP+C +    D ++ GD+ C+   N AECG+DGGDCC+C C   G  +              CG    GY CVDP +                                 +  +D YP C   GG +  IG+G C   NN   CG+DGGDCC C C  ++ +E  CG+  +GYDC DP  P +C
Sbjct:   56 TALYPDCEA----DMALVGDSLCDFDVNVAECGFDGGDCCECTCVDTGDQV--------------CGEGGTGYFCVDPDAPQDCASSPSPTPNTPSSPTSSDAIDVTAGPTSLDASDDPYPGC---GGYIPHIGDGYCDEDNNTAACGFDGGDCCACTCGVDADVEHECGLLGDGYDCRDPDVPDDC 221
[Close]
BLAST of Ec-28_003660.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 7.810e-19
Identity = 62/185 (33.51%), Postives = 85/185 (45.95%), Query Frame = 1 
Query:  412 LYPNCTSLAYYDDSVPGDNYCNSYYNNAECGYDGGDCCDCDCGTFGTSLDSSSSTTFSSSNFTCG--ANGYVCVDPAS---------------------------------ECFEDLYPDCVSRGGTLEWIGNGACYWGNNFEECGYDGGDCCECDC--ESTLESHCGV--NGYDCADPSSPSEC 849
            LYP+C +    D ++ GD+ C+  +N AECG+DGGDCC+C C   G  +              CG    GY CVDP +                                 +  +D YP C   GG +  IG+G C   NN   CG+DGGDCC C C  ++ ++  CG+  +GYDC DP  P +C
Sbjct:   60 LYPDCEA----DTALVGDSICDLDFNVAECGFDGGDCCECTCVDTGDQV--------------CGEGGGGYFCVDPDAPQDCASAPSPTPNTPSAPTSSDAIDVTAGPTSLDASDDPYPGC---GGYIPHIGDGYCDEDNNTAACGFDGGDCCACTCGMDAEVDHECGLLNDGYDCRDPDVPEDC 223
[Close]
BLAST of Ec-28_003660.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 2.080e-18
Identity = 66/176 (37.50%), Postives = 89/176 (50.57%), Query Frame = 1 
Query:  373 LASIRRLAINFTDLYPNCTSLAYYDDSVPGDNYCNSYYNNAECGYDGGDCCDCDCGTFGTSLDSSSSTTFSSSNFTCGANG--YVCVDPASECFEDLYPDCVSRGGTLE---W-IGNGACYWGNNFEECGYDGGDCCECDCE--------STLESHCGVNGYDCADPSSPSECIED 858
            L  +   A+  + +  N  S +   D++ GD YC    NNAECGYDGGDCC+C C           +      ++ C  NG  + CVDP + C+ +   D V+   + E   W +G+G C   NN E CGYDGGDCCEC CE        + L   CG  G+ C DPS+P  C+ D
Sbjct:    8 LLGVLGAAVVLSSVAANSLSSSGCWDALYGDGYCTPPNNNAECGYDGGDCCECTC----------QNPQGGDHHWICSKNGSGFACVDPDAPCYAE---DGVTVEASQECDFWDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACG-EGFACIDPSAP--CVND 167
[Close]
BLAST of Ec-28_003660.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 2.430e-18
Identity = 57/141 (40.43%), Postives = 72/141 (51.06%), Query Frame = 1 
Query:  460 GDNYCNSYYNNAECGYDGGDCCDCDCGTFGTSLDSSSSTTFSSSNFTCGA-NGYVCVDPASECFED------LYPDCVSRGGTLEWIGNGACYWGNNFEECGYDGGDCCECDCESTLESHCGV-NGYDCADPSSPSECIED 858
            GD YCN   NN  C YDGGDCC+C C                + N  CG  + + C+DPA+ C +D      +  +C   GG    IGNG C   NN E C YDGGDCCEC CES  +      N + C DP++P  C++D
Sbjct:  220 GDGYCNMDNNNEACAYDGGDCCECTCED--------------TPNNRCGRWSSFACIDPAAPCVDDDSFTVDMIDNCEYPGG----IGNGWCDVDNNNELCAYDGGDCCECTCESLEDDDWACRNNFACVDPNAP--CVDD 340
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BLAST of Ec-28_003660.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 3.560e-18
Identity = 62/161 (38.51%), Postives = 77/161 (47.83%), Query Frame = 1 
Query:  409 DLYPNCTSLAYYDDSVPGDNYCNSYYNNAECGYDGGDCCDCDCGTFGTSLDSSSSTTFSSSNFTCGAN---GYVCVDPASECFED-----LYPDCVSRGGTLEWIGNGACYWGNNFEECGYDGGDCCECDCEST---LESHCGVNGYDCADPSSPSECIED 858
            D+  NC     YD S  G+  C+S  NN +C YDGGDCC+C C          S   +  S   C      G+ C+DP + C +D        D  S G     IGNG C   NN  EC YDGGDCCEC CES     E +C    + C DP +  EC++D
Sbjct:  155 DMMENC-----YDPSRIGNGACDSLLNNEDCAYDGGDCCECTCDP--------SRYPWYDSGVGCQTGMYGGFACIDPDAPCVDDDIVTAEMMDLCSTG----QIGNGYCDDSNNSPECAYDGGDCCECTCESHDDGYEYYCEPGSFACIDPEA--ECVDD 296
[Close]
BLAST of Ec-28_003660.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 3.970e-18
Identity = 55/141 (39.01%), Postives = 74/141 (52.48%), Query Frame = 1 
Query:  463 DNYCNSYYNNAECGYDGGDCCDCDCGTFGTSLDSSSSTTFSSSNFTCGANGYVCVDPASECFED--LYPDCVSRGGTLEWIGNGACYWGNNFEECGYDGGDCCECDCESTLE------SHCGVNG-YDCADPSSPSECIED 858
            D  C+++ NNAEC YDGGDCC C C                +  + CG +G+ CVDP++EC +D  +  + V   G    IG+G C   NN EEC YDGGDCC C C+   +      S CG +  + C DP +P  C+ D
Sbjct:   39 DGECDTHNNNAECEYDGGDCCSCTC---------------QNDTYDCGVSGFDCVDPSAECVDDDDIGTETVQNCGDPWAIGDGNCDKDNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAP--CVND 162
[Close]
BLAST of Ec-28_003660.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 4.640e-17
Identity = 58/161 (36.02%), Postives = 80/161 (49.69%), Query Frame = 1 
Query:  409 DLYPNCTSLAYYDDSVPGDNYCNSYYNNAECGYDGGDCCDCDCGTFGTSLDSSSSTTFSSSNFTCGANGYVCVDPASECFED--LYPDCVSRGGTLEWIGNGACYWGNNFEECGYDGGDCCECDCESTLESHCGVNG----YDCADPSSPSECIEDVPTPS 873
            D++ NC     Y   + G+ +C+   N   CGYDGGDCC+C C  + +  D      +    F        C+DP++ C +D  +  D V   G +  IGNG C   NN EECGYDGGDCC C CES  +     +     +DC DP++   C  + PT S
Sbjct:  188 DMFENCE----YPVDI-GNGWCDEANNIEACGYDGGDCCECTC-EYESPYDWDDDWDYHCMEF-------ACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESPYDDDYSCSSEYGSFDCKDPNA--SCFGEEPTGS 333
The following BLAST results are available for this feature:
BLAST of Ec-28_003660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JX54_9PHAE4.100e-19791.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX77_ECTSI5.190e-2143.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J6K0_9PHAE3.080e-2043.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX76_ECTSI2.520e-1934.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVP4_9PHAE7.810e-1933.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4F9_ECTSI2.080e-1837.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM92_9PHAE2.430e-1840.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEP6_ECTSI3.560e-1838.51Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5JTT4_9PHAE3.970e-1839.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3F4_ECTSI4.640e-1736.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:3482280..3488182 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score107.1
Seed ortholog evalue1.7e-20
Seed eggNOG ortholog2880.D7FX77
Length1062
Hectar predicted targeting categorysignal peptide
Gene idEc-28_003660.1
EggNOG OGs2E9KF@1,2SFXU@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003660Ec-28_003660Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 3482280..3488182 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_003660.1Ec-28_003660.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 3482280..3488182 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_003660.1.10Ec-28_003660.1.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3482280..3482407 -
Ec-28_003660.1.9Ec-28_003660.1.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3482628..3482705 -
Ec-28_003660.1.8Ec-28_003660.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3483045..3483142 -
Ec-28_003660.1.7Ec-28_003660.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3483410..3483446 -
Ec-28_003660.1.6Ec-28_003660.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3484085..3484153 -
Ec-28_003660.1.5Ec-28_003660.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3484764..3484934 -
Ec-28_003660.1.4Ec-28_003660.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3485142..3485213 -
Ec-28_003660.1.3Ec-28_003660.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3485726..3485798 -
Ec-28_003660.1.2Ec-28_003660.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3486136..3486353 -
Ec-28_003660.1.1Ec-28_003660.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3488065..3488182 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_003660.1CDS:Ec-28_003660.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 3482280..3482407 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_003660.1 ID=Ec-28_003660.1|Name=Ec-28_003660.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=354bp
MKPQLMAVLAVLLSVVSATGHEDSRSFQPRDDGLAGAVPDREESLLTSWP
LMGDGRVEMSSARSASAAETAAVVHGVMNEGLEGEDLWPTVPAEAGGRRG
QEDEEKTADVVVQEQGVVSRDEDGLASIRRLAINFTDLYPNCTSLAYYDD
SVPGDNYCNSYYNNAECGYDGGDCCDCDCGTFGTSLDSSSSTTFSSSNFT
CGANGYVCVDPASECFEDLYPDCVSRGGTLEWIGNGACYWGNNFEECGYD
GGDCCECDCESTLESHCGVNGYDCADPSSPSECIEDVPTPSPQEQAPTPS
PLEVTPAVSSEDGDSDDTFVRDIIIGVISTVVGGVALALVTKYCLGERAS
SAG*
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spliced messenger RNA

>Ec-28_003660.1 ID=Ec-28_003660.1|Name=Ec-28_003660.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1062bp|location=Sequence derived from alignment at chr_28:3482280..3488182- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGCCCCAGCTTATGGCGGTCCTAGCGGTGCTTCTCAGCGTCGTTTC
TGCCACAGGACATGAAGATAGCCGCAGCTTTCAACCACGGGATGATGGAT
TGGCCGGCGCCGTCCCAGACCGTGAGGAATCACTGCTGACGTCGTGGCCG
TTGATGGGCGATGGTCGGGTGGAGATGTCTTCAGCGAGAAGCGCCTCGGC
GGCGGAGACCGCAGCGGTGGTGCATGGTGTCATGAACGAGGGCTTGGAGG
GGGAGGATCTGTGGCCAACAGTACCAGCGGAGGCAGGCGGGCGGCGGGGG
CAAGAGGACGAAGAGAAAACAGCAGACGTTGTTGTGCAGGAACAAGGAGT
GGTATCGCGAGATGAGGATGGGCTTGCCAGTATCAGACGACTGGCCATTA
ATTTTACTGATCTCTACCCAAACTGCACTTCACTAGCGTACTACGATGAC
AGTGTGCCTGGGGACAACTACTGCAATTCATATTACAACAACGCCGAGTG
TGGGTACGATGGCGGGGATTGCTGCGACTGCGACTGCGGCACGTTTGGTA
CGTCCTTGGATTCGTCGTCTTCGACGACTTTTTCTTCGTCGAATTTCACG
TGCGGGGCCAACGGATACGTCTGCGTGGATCCCGCATCGGAGTGCTTCGA
AGACCTGTATCCTGATTGCGTCTCAAGAGGCGGAACCCTGGAATGGATCG
GAAACGGGGCCTGCTACTGGGGGAACAACTTCGAAGAATGCGGCTACGAT
GGAGGAGATTGTTGCGAATGCGACTGCGAGTCAACCCTGGAGAGTCACTG
TGGCGTGAATGGCTACGACTGCGCCGATCCTAGTTCGCCTTCGGAGTGCA
TAGAAGATGTGCCGACACCGTCACCGCAAGAGCAAGCACCCACGCCATCT
CCACTAGAAGTCACGCCGGCAGTATCGTCCGAAGATGGTGATTCGGATGA
CACCTTCGTGAGGGACATCATCATCGGAGTGATTTCAACCGTGGTCGGTG
GGGTAGCATTAGCATTAGTCACCAAATATTGTCTAGGAGAACGAGCGTCT
TCGGCAGGATGA
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protein sequence of Ec-28_003660.1

>Ec-28_003660.1 ID=Ec-28_003660.1|Name=Ec-28_003660.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=354bp
MKPQLMAVLAVLLSVVSATGHEDSRSFQPRDDGLAGAVPDREESLLTSWP
LMGDGRVEMSSARSASAAETAAVVHGVMNEGLEGEDLWPTVPAEAGGRRG
QEDEEKTADVVVQEQGVVSRDEDGLASIRRLAINFTDLYPNCTSLAYYDD
SVPGDNYCNSYYNNAECGYDGGDCCDCDCGTFGTSLDSSSSTTFSSSNFT
CGANGYVCVDPASECFEDLYPDCVSRGGTLEWIGNGACYWGNNFEECGYD
GGDCCECDCESTLESHCGVNGYDCADPSSPSECIEDVPTPSPQEQAPTPS
PLEVTPAVSSEDGDSDDTFVRDIIIGVISTVVGGVALALVTKYCLGERAS
SAG*
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mRNA from alignment at chr_28:3482280..3488182-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_003660.1 ID=Ec-28_003660.1|Name=Ec-28_003660.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=5903bp|location=Sequence derived from alignment at chr_28:3482280..3488182- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAAGCCCCAGCTTATGGCGGTCCTAGCGGTGCTTCTCAGCGTCGTTTC
TGCCACAGGACATGAAGATAGCCGCAGCTTTCAACCACGGGATGATGGAT
TGGCCGGCGCCGTCCCAGGTATTGTCTTCCCATTTTGCCGTGGGCCATAC
GGGTACGAAGGACGTGGCTCGGTGGATTTCTTTTGGTTCGCTTGTGCGTG
CTTTCGTGTCCATGTCCTCGCCTGCCCTGCCAGCAGCGGACCATCGTAAC
TGTACCAGACCGGCAGTCAGCGGCTAAATAGCATTCGCGGCAAAATAGTA
CTGGAACACCGCTTCTCGCACCACCAACAGACAACAGGACAAAGAAGGAG
TGGAAGCATGGAACCAGCTGTTGCGTGGCAGGGGTGGCCAAAATTTTGTT
CGCAGCTGGTTGCAGACGAACAACATACTCTGTTCCGCTGATCTGCCGCT
GTAGAGGCGGAGACATGTAAATGGCAAAACCTTCCTCGCTACATCGGCCT
TCAGTAATCTCCGTGTATACGTTTACGTACGTATGAAGCGCGAGAGGAAG
GAGCTTGACCGGTTGTATAGCGGTGCCCGTGTGGTGAAAAGAAGTATACG
AGGGGCATCGGCGGCTCATGGTTCTTGTCGCCTTGTGGTGGATGTTTGTT
ATCTTTGGCTCCGGACGGATGTATGCGTCTGTCATCCGACAGCAGGAGGA
GTGTTGTGCAGACAAAAGAAATTGCGGACAACAATATCTGGACAGGTTCT
CGGTTCTCATCACACGCCACCTGCAGTATATATAGTCCGTCGGTTCGATT
TGGATACAGTACAGTACATTAGGGGGGGGGCATATCTGGCAGTGTGAATA
GTATACTGTAGTAGGGCGGAAATCTCGATATAAGGCGGCCGAATTTTGCG
CCCACAACTCAGACCCGCCTTATCCCGGGTCGGACCCTTTGTAAGGCGTT
AGCTATCGATCTGAAACCCATGTGGGGCGGTGTTCATCTTCGCCTCAGTA
CGCCGTCTTTGAAACAAACCTCTCTGACACAAGGCACCTGAGCGAGAGAA
CAATACAACGCCAAGCTTGAGCTGTACACAACAAATATCACTTGCCGCAT
CTAAACCTGAGCGGCAGTCGAACATGAGAGAATTATTGTATGCATAGGCG
GCACGTAGGCGGATCAAAGGTGCCCGGAAGAAGCTACTCCGCACGCCTAC
GTACCCCCGCTCTGGGAGGGCCGAACTTTGGAAAATGACAAACATGGTAC
GTACATCGTCCACGCCATTTTTTTTCTCTTGATTCATTGACTTGCAATAT
GCATCGTGTAGTGCACGTCGCACCTGTTTGATCTGTAGACTCGTCTAGTA
CATACGAAATACTGGCACTACATGAAACTGTCACTGCGCCCAGAACTGGT
AGGTGGTGGAGAAACCACACCACGTCCTCGTATCAGTTCTCCGTACATCT
GAGGAGCCCAGGCAAGTAGCAGCACACACCTCTGCGCGCGTGGCCTGAGA
ACCCCAATGCTATGTAGACAGAACCTCAGAACGTCATTATGCTCAGTGTT
CTGACAATACGGCATATAAAGTATTTAAACTACACAGCAACTCCGAAGGC
GCCTTTTCGGGGTGCGTTTACGCCCCCTCGAGCTCATGTCTCTCAGTCTC
GAACAGGTAGTTTTTCTAGGCTATTACTGTACACATGCAGGCGATTCTAT
ATTGGCTCCCTCCTACATCGTGGATGTGCAGAACGACGGTCTGATCGGAA
AAAATGGTGACTGATCGGAAATGAAACTTGGCTGATCCGCAACAAGAAGA
GATGCACCCATGTTCGTTGTACACCTCAGACCGTGAGGAATCACTGCTGA
CGTCGTGGCCGTTGATGGGCGATGGTCGGGTGGAGATGTCTTCAGCGAGA
AGCGCCTCGGCGGCGGAGACCGCAGCGGTGGTGCATGGTGTCATGAACGA
GGGCTTGGAGGGGGAGGATCTGTGGCCAACAGTACCAGCGGAGGCAGGCG
GGCGGCGGGGGCAAGAGGACGAAGAGAAAACAGCAGACGTTGTTGTGGTA
GGTCGAGTACGCGGGCGCGCCGGAGGTGTGTCGACAAATAAGTCTTCTAA
TCCGCAGTGTAAGATTTGAAAGGTGCATTTACAGGGGCTTAGAAAAAACA
ATACCATCGTCCGAGAAAGGGTTTTCAGGTCCATCACAGACGGTGGTTGT
TCCAGAAGGTTTCATCGGCCGTAGAAGTTTCACTCCAATCCCATTTCCGT
GCGCTCGACGATCAACACAACAAGCACCACCCCTAACTCCCCTCTTGTTT
CCCTCCAAAACATATCTCCCGTTCGAATTCGTGGATTGATGGTGTCCTAT
GCGACGGCCGCGGCCAATGTTCTTTATGGACCAGCAGGAACAAGGAGTGG
TATCGCGAGATGAGGATGGGCTTGCCAGTATCAGACGACTGGCCATTAAT
TTTACTGGTGAGAGGGGCGGTGTCTATCTCGTTTGCTTGGGCAGCATGCC
TCCGTTGCAAGCCCTAACAGCCCTACGGTATGCGGTGTCCTTTGCTCTGG
ATAAACCATTCATGTGGGTGGCTCTGGGTTTTCATTCCTGCCACAGTTCT
ACCCCCATGTTTTCGGCACTTGGACCGTAAATGTTGATTGATTTCACGTC
TACCTCCCCGTTGGCGAAGTCGTTGGCGACGTCGAAACCCTGCTGTGTAC
ATTATTGCAAGTGGCTGCTACAGCCAGAGCCATTGGTGTGGTTTCAGAAC
ACTTGTCATTCTGAAGCATGTTCGTGCTCGACGAACTCTGTCTACCCGTG
GAGGTGTTGAATGCCCGTGTTGAAAGAATGAAAGCGTGCACGTCTTCAAC
AGCTGCCACTACGGTGCAGGCACCGCCTGTGAACGTCAGGACCGCGTGAA
CATGGCTTCCTCACTTTTCAAGGGTCATTCTGGGACCCCCACCCACGCAT
ATGTGCTTCGATGGCGCAGATCTCTACCCAAACTGCACTTCACTAGCGTA
CTACGATGACAGTGTGCCTGGGGACAACTACTGCAATTCATGTAAGGATC
TGGGCGTATTTTCTTGCCTGACGAGGTACAAAGCCACGGCCTCATGCTTG
CGGAGGGCCAAGGTTGGTTGTTGCGCGATGCTTTTGCCCAAGAAGAGCGT
CATGCAAGCGTTAAGATATGAGTTTTGCCACATGTAGAAACATACCAAAA
GGGACGCCAAGCAGAGGCGCTAGCCATGCCACACGGTCCTCTCCGCAGAT
TACAACAACGCCGAGTGTGGGTACGATGGCGGGGATTGCTGCGACTGCGA
CTGCGGCACGTTTGGTACGTCCTTGGATTCGTCGTCTTCGACGACTTTTT
CTTCGTCGAATTTCACGTGCGGGGCCAACGGATACGTCTGCGTGGATCCC
GCATCGGAGTGCTTCGAAGGTGGGCACAAGAGTGAATCGTTTTGTATTCA
CCCGTGACGTTCGACCTACTTCCTCTATGTAGTGTCGTGACATGGCCATT
TTTGTTGCCCCCCCCCCATCGTCACTACTCACAGGTATTTAGGAAGCACA
GGTTGGTGGTGTAGACAAGCATGTATCGGAATCCTACTTCCAACGCCTAT
TCCTCTGTTTTTCCTGACAGCACAATACATGTTTCACTTCATAATTACAG
TCATTTCGGGTTATGTCGTCACTGCAGTATGTAGATTTAGCTCAATTTCT
CTTGGGTTTTCTGTCATCTCCTCGATTGTCATTGTGTGAATTTCTTCCAG
GGGTGCTTGAGCGGGCCAGCGCTGACTCGACCTGCATCACTAGGCGCGCA
TGATATATCTTGCGTCTGTCAGTGCTTGAGGCATGCTGCGAAGGGCTGCT
ACACGATAGATTGTGCAAAACCACCGTGATGTTCATCATCTTTCGGTTTC
AGCAGCTAGGGTTAAGGGTTAGGCCGTCGTGCCCTCGCACGTCTACGCAT
TGTTCCACGTGATGCCGCATGGTAGGTCTTCGTCTCCCGCTTATGTGCTC
GCCCATGCTTTATCGTTCGTGTTGTGCAGACCTGTATCCTGATTGCGTCT
CAAGAGGCGGAACCCTGGAATGGATCGGAAACGGGGCCTGCTACTGGGGT
GAGCGTTGACGTATGATATCTTCAGTTGTTCGGTCCGCTGTGCCTCTCAG
CTTGCAAGAGACAAAGTCTAGTCGATGTGACGCGTGCGTCTCAAGGCCGT
GCACGCAGGTGGTGGAACGTTGTACGACTCGGTCGGCTCGTGCTTCCCTT
TCATACATTCATACTCATATTTGGAGGATAGCAGAAAGATTCACAGGTTG
TAGTACCTTGTGAGAGCGATGCCGTTGGCCACCTCATGGGGGAGGGAGGG
CTGGTTCACCATGTTCCTGGTGTTGTGCTCAGTTGACGGGCGATTATGCA
CGTACACGGCTTTCACTCCTTGCTAGCCGAGCAACACCGCTATGCTGCAC
CTACCGGGGCCGAGCGAAGCACTTGTCCACTTTATTGTCTCACATTCCTC
GCAGAAATTTCAATCTATTGTAACTCCAAGATGTCGAAACCGTCACAACT
TTCCAGTGGTTCTTGACATGCAGAGGTCTCATCGAGCACCAACCTTAGAC
TACGTATTTAATGTTACTTCCTGAACATGCCCGTAATGGCTGTGGTTTGT
ATGTGTTGCCGATGGCGAATTCAAGAGCGACCGCTCCACCCATGTTGGCA
ACCGGTGTCCCCCTTCCTATTCACGCGCGCACGCAGGGAACAACTTCGAA
GAATGCGGCTACGATGGAGGAGAGTAAGTTGCTGTCCCCCGGGAGTGGAT
TTCAAGTGTTGCCGTACGCACACAAGCGGCGAACCAAGCGAATCAGTTAC
GCGATTCGTGCATTGATGAGTGAAATATTTCGTGGGTTGGTCGGAACGCT
TTATTTTCGTTGCGCGATGAAGCTGAGGCATGCGCTAGGTGTCGATCTTT
GAGCTGTCCGGCAACTCCCTCGTCCTCACCCCCCCCCACCCGCACTATTG
TCCCACTCCGTCGTCCCCCTGTCCTGGCGGTTTGCGTCAGTTGTTGCGAA
TGCGACTGCGAGTCAACCCTGGAGAGTCACTGTGGCGTGAATGGCTACGA
CTGCGCCGATCCTAGTTCGCCTTCGGAGTGCATAGAAGGTGGGCTGAAGC
GTAATGACCTCCGTTGGTGAACGTGTCGATATCGCTGAGCTCTCACCTGA
TTCACCTGTGTGCTTCATACCCCCTGAGCGTCATCCGGGTAGTCTTGCAA
TCGGTAACGGCAGACTTTTGTTTCCTCATATGCGGCCTTGATTCCATACT
CGCTGGTCAACTGCTGAGTGTCGATCCGCGAAACAGATATCACCACCGGG
GTCATGAGGCACTCTATCGACGTAATTTTTGAGAAGTAGTCGCATAGATA
ACTCGATGTCGCCTCCTTGTCAATCTCAGCCGCCGATCCCCTCGCGTGGT
CAATCTACCTCTGATCATCACCATTAGATGTGCCGACACCGTCACCGCAA
GAGCAAGCACCCACGCCATCTCCACTAGAAGTCACGCCGGCAGTATCGTC
CGAAGGTATGCTTGATTTGGCGCATGTGACGCAACGACCTGTTGTATTTA
GATTCTGATTGGCGTCTCACAGGAACTAGTCACCGTTCTTTGTGAAGTGC
TTGGTAGAGTGAACTTTTCAGCTACGTCGTTGTGAAGGGTGTTGTGAGAG
GGATTTGAAGTCATCTGCGTCCGATCATTGTGCCCACTCTTTGCCCATGT
ATATTTTCCCGGCTGCCTTGTACAGATGGTGATTCGGATGACACCTTCGT
GAGGGACATCATCATCGGAGTGATTTCAACCGTGGTCGGTGGGGTAGCAT
TAGCATTAGTCACCAAATATTGTCTAGGAGAACGAGCGTCTTCGGCAGGA
TGA
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Coding sequence (CDS) from alignment at chr_28:3482280..3488182-

>Ec-28_003660.1 ID=Ec-28_003660.1|Name=Ec-28_003660.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1062bp|location=Sequence derived from alignment at chr_28:3482280..3488182- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAAGCCCCAGCTTATGGCGGTCCTAGCGGTGCTTCTCAGCGTCGTTTC
TGCCACAGGACATGAAGATAGCCGCAGCTTTCAACCACGGGATGATGGAT
TGGCCGGCGCCGTCCCAGACCGTGAGGAATCACTGCTGACGTCGTGGCCG
TTGATGGGCGATGGTCGGGTGGAGATGTCTTCAGCGAGAAGCGCCTCGGC
GGCGGAGACCGCAGCGGTGGTGCATGGTGTCATGAACGAGGGCTTGGAGG
GGGAGGATCTGTGGCCAACAGTACCAGCGGAGGCAGGCGGGCGGCGGGGG
CAAGAGGACGAAGAGAAAACAGCAGACGTTGTTGTGCAGGAACAAGGAGT
GGTATCGCGAGATGAGGATGGGCTTGCCAGTATCAGACGACTGGCCATTA
ATTTTACTGATCTCTACCCAAACTGCACTTCACTAGCGTACTACGATGAC
AGTGTGCCTGGGGACAACTACTGCAATTCATATTACAACAACGCCGAGTG
TGGGTACGATGGCGGGGATTGCTGCGACTGCGACTGCGGCACGTTTGGTA
CGTCCTTGGATTCGTCGTCTTCGACGACTTTTTCTTCGTCGAATTTCACG
TGCGGGGCCAACGGATACGTCTGCGTGGATCCCGCATCGGAGTGCTTCGA
AGACCTGTATCCTGATTGCGTCTCAAGAGGCGGAACCCTGGAATGGATCG
GAAACGGGGCCTGCTACTGGGGGAACAACTTCGAAGAATGCGGCTACGAT
GGAGGAGATTGTTGCGAATGCGACTGCGAGTCAACCCTGGAGAGTCACTG
TGGCGTGAATGGCTACGACTGCGCCGATCCTAGTTCGCCTTCGGAGTGCA
TAGAAGATGTGCCGACACCGTCACCGCAAGAGCAAGCACCCACGCCATCT
CCACTAGAAGTCACGCCGGCAGTATCGTCCGAAGATGGTGATTCGGATGA
CACCTTCGTGAGGGACATCATCATCGGAGTGATTTCAACCGTGGTCGGTG
GGGTAGCATTAGCATTAGTCACCAAATATTGTCTAGGAGAACGAGCGTCT
TCGGCAGGATGA
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Synonyms
The feature 'Ec-28_003660.1' has the following synonyms
Synonym
Esi009_0251
Esi_009_0251