Ec-28_003560.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_003560.2
Unique NameEc-28_003560.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length150
Homology
[Close]
BLAST of Ec-28_003560.2 vs. uniprot
Match: A0A6H5KW40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW40_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 5.950e-87
Identity = 131/149 (87.92%), Postives = 136/149 (91.28%), Query Frame = 2 
Query:  206 KKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVSSRCRNGAPSRKG 652
            K YLDGPMDYAKKLKLQFRVGDLDLPERRKRY+S       DR TCPCGKSEESRPHIVGECELYRKEREDLEE+MRQRGCDMDKFGKLDNSEKTIA IGDRWWAQEA+EDGD MCK+FL SLWQKR+ELPNVGGVSSR RNGAPSRKG
Sbjct:   34 KSYLDGPMDYAKKLKLQFRVGDLDLPERRKRYSSXXXXXXXDRQTCPCGKSEESRPHIVGECELYRKEREDLEEDMRQRGCDMDKFGKLDNSEKTIAGIGDRWWAQEAVEDGDNMCKEFLCSLWQKREELPNVGGVSSRGRNGAPSRKG 182
[Close]
BLAST of Ec-28_003560.2 vs. uniprot
Match: A0A6H5K1U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1U0_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 2.150e-84
Identity = 132/150 (88.00%), Postives = 136/150 (90.67%), Query Frame = 2 
Query:  203 MKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVSSRCRNGAPSRKG 652
            MK YLDGPMDYAKKLKLQFRVGDLDLPERRKRY+S       DR TCPCGKSEESRPHIVGECELYRKEREDLEE+MRQRGCDMDKFGKLDNSEKTIA+ GDRWWAQEA+ED DKMCKKFL SLWQKR ELPNVGGVSSR RNGAPSRKG
Sbjct:  288 MKSYLDGPMDYAKKLKLQFRVGDLDLPERRKRYSSXXXXXXXDRQTCPCGKSEESRPHIVGECELYRKEREDLEEDMRQRGCDMDKFGKLDNSEKTIAVTGDRWWAQEAVEDRDKMCKKFLCSLWQKRTELPNVGGVSSRGRNGAPSRKG 437
[Close]
BLAST of Ec-28_003560.2 vs. uniprot
Match: D7G873_ECTSI (Chromodomain-helicase-DNA-binding protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G873_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 1.570e-81
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 2 
Query:  203 MKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNV 604
            MKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPN 
Sbjct: 1422 MKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNA 1555
[Close]
BLAST of Ec-28_003560.2 vs. uniprot
Match: A0A6H5KD64_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD64_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 1.610e-80
Identity = 129/150 (86.00%), Postives = 137/150 (91.33%), Query Frame = 2 
Query:  203 MKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVSSRCRNGAPSRKG 652
            MK YLDGPMDYAK+LKLQFRVGDLDLP+RRKRY+        DR TCPCGKSEESRPHIVGECELYRKEREDLEE+MRQRGCDMDKFGKLDNSEKTIA+IGDRWWAQEA+EDGD MCK+FL SLWQKRKELPNVGGVSSR RNG+PSRKG
Sbjct:  618 MKSYLDGPMDYAKRLKLQFRVGDLDLPQRRKRYSXXXXXXXXDRQTCPCGKSEESRPHIVGECELYRKEREDLEEDMRQRGCDMDKFGKLDNSEKTIAVIGDRWWAQEAVEDGDNMCKEFLCSLWQKRKELPNVGGVSSRGRNGSPSRKG 767
[Close]
BLAST of Ec-28_003560.2 vs. uniprot
Match: A0A6H5KW01_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW01_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 1.110e-79
Identity = 130/150 (86.67%), Postives = 136/150 (90.67%), Query Frame = 2 
Query:  203 MKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVSSRCRNGAPSRKG 652
            MK YLDGPMDYAKKLKLQFRVGDLDLPERRKRY+S       DR TCPCGKSEESRPHIVGECELYRKEREDLEE+MRQRG D+DKFGKLDNSE TIA+IG+RWWAQEA+EDGDKMCKK L SLWQKRKELPNVGGVSSR RNGAPSRKG
Sbjct:  373 MKSYLDGPMDYAKKLKLQFRVGDLDLPERRKRYSSXXXXXXXDRQTCPCGKSEESRPHIVGECELYRKEREDLEEDMRQRGFDLDKFGKLDNSE-TIAVIGNRWWAQEAVEDGDKMCKKCLCSLWQKRKELPNVGGVSSRGRNGAPSRKG 521
[Close]
BLAST of Ec-28_003560.2 vs. uniprot
Match: A0A6H5KVQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVQ8_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 5.000e-79
Identity = 129/150 (86.00%), Postives = 138/150 (92.00%), Query Frame = 2 
Query:  203 MKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVSSRCRNGAPSRKG 652
            MK YLDGPMDYAKKLKLQFRVGDLDLPERRKRY+S       DR +CPCGKSEESRPH VGECELYRKEREDLEE+MRQRGC+MDKFGK+D++EKTIA+IGDRWWAQEA+EDGDKMCKKFL SLWQKRKELPNVGGVSSR RNGAPSRKG
Sbjct:  866 MKSYLDGPMDYAKKLKLQFRVGDLDLPERRKRYSSXXXXXXXDRQSCPCGKSEESRPHTVGECELYRKEREDLEEDMRQRGCEMDKFGKIDHNEKTIAVIGDRWWAQEAVEDGDKMCKKFLCSLWQKRKELPNVGGVSSRGRNGAPSRKG 1015
[Close]
BLAST of Ec-28_003560.2 vs. uniprot
Match: A0A6H5JGS1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS1_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 6.440e-78
Identity = 131/149 (87.92%), Postives = 135/149 (90.60%), Query Frame = 2 
Query:  206 KKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVSSRCRNGAPSRKG 652
            K YLDGPMDYAKKLKLQFRVGDLDLPERRKRY+S       DR TCPCGKSEESRPHIVGECELYRKEREDLEE+MRQRGCDMDKFGKLDNSEKTIA+IGDRWWAQEA+EDGDK CKKFL SLWQKRKELPNVGGVS R  NGAPSRKG
Sbjct: 1766 KSYLDGPMDYAKKLKLQFRVGDLDLPERRKRYSSXXXXXXXDRQTCPCGKSEESRPHIVGECELYRKEREDLEEDMRQRGCDMDKFGKLDNSEKTIAVIGDRWWAQEAVEDGDKTCKKFLCSLWQKRKELPNVGGVSIRGGNGAPSRKG 1914
[Close]
BLAST of Ec-28_003560.2 vs. uniprot
Match: A0A6H5L2T7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T7_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 4.080e-76
Identity = 118/139 (84.89%), Postives = 125/139 (89.93%), Query Frame = 2 
Query:  200 RMKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVS 616
            RMK YLDGPMDYAKKLKLQFRVGDLDLPERRKRY+S       DR TCP GKSE+SRPHIVGE ELYRKEREDLEE+MRQ GCDMDKFGKLDNSEKTIA+IGDRWWAQ+A+ED DKMCKKFL SLWQ+RKELPNVGGVS
Sbjct:   38 RMKSYLDGPMDYAKKLKLQFRVGDLDLPERRKRYSSXXXXXXXDRQTCPFGKSEKSRPHIVGEGELYRKEREDLEEDMRQIGCDMDKFGKLDNSEKTIAVIGDRWWAQKAVEDWDKMCKKFLCSLWQERKELPNVGGVS 176
[Close]
BLAST of Ec-28_003560.2 vs. uniprot
Match: A0A6H5J715_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J715_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 3.470e-74
Identity = 115/133 (86.47%), Postives = 121/133 (90.98%), Query Frame = 2 
Query:  203 MKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPN 601
            MK YL+GPMDYAKKLKLQFRVGDLDLPERRKRY+S       DR TCPCGKSEESRPHIVGECELYRKEREDLEE+MRQRGCDMDKFGKLDNSE+TI +IGDRWWAQE +EDGDKMCKKFL SLWQKRKELPN
Sbjct:  237 MKSYLEGPMDYAKKLKLQFRVGDLDLPERRKRYSSXXXXXXXDRQTCPCGKSEESRPHIVGECELYRKEREDLEEDMRQRGCDMDKFGKLDNSEQTIVVIGDRWWAQETVEDGDKMCKKFLCSLWQKRKELPN 369
[Close]
BLAST of Ec-28_003560.2 vs. uniprot
Match: A0A6H5L585_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L585_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 5.330e-74
Identity = 120/150 (80.00%), Postives = 126/150 (84.00%), Query Frame = 2 
Query:  203 MKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCGKSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAIIGDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVSSRCRNGAPSRKG 652
            MK YLDGP DYAKK+KLQFRVGDLDLPE RKR+                 KSEESRPHIVGECELYRKEREDLEE+MRQRGCDMDKFGKLD+SEKTI +I DRWWAQEA+EDGDKMCKKFL SLWQKRKELPNVGGVSSR RNGAPSRKG
Sbjct:  175 MKSYLDGPTDYAKKMKLQFRVGDLDLPEPRKRHVH-------------VAKSEESRPHIVGECELYRKEREDLEEDMRQRGCDMDKFGKLDDSEKTITVIEDRWWAQEAVEDGDKMCKKFLCSLWQKRKELPNVGGVSSRGRNGAPSRKG 311
The following BLAST results are available for this feature:
BLAST of Ec-28_003560.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KW40_9PHAE5.950e-8787.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1U0_9PHAE2.150e-8488.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G873_ECTSI1.570e-8199.25Chromodomain-helicase-DNA-binding protein 8 n=2 Ta... [more]
A0A6H5KD64_9PHAE1.610e-8086.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KW01_9PHAE1.110e-7986.67Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KVQ8_9PHAE5.000e-7986.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGS1_9PHAE6.440e-7887.92Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L2T7_9PHAE4.080e-7684.89Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5J715_9PHAE3.470e-7486.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L585_9PHAE5.330e-7480.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:3365755..3369949 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score279.3
Seed ortholog evalue1.1e-72
Seed eggNOG ortholog2880.D7G873
Length655
KEGG rclassRC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496
KEGG koko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437
KEGG ReactionR00851,R03875,R03938,R04866,R04867,R09380
KEGG Pathwayko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202
KEGG ModuleM00089
Hectar predicted targeting categoryother localisation
Gene idEc-28_003560.2
EggNOG free text desc.SET domain
EggNOG OGsCOG0553@1,COG2940@1,COG5076@1,KOG0383@2759,KOG0384@2759,KOG1075@1,KOG1075@2759,KOG1081@2759,KOG1474@2759
EC2.1.1.43,2.3.1.15,3.6.4.12
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003560Ec-28_003560Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 3365755..3369949 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_003560.2.3Ec-28_003560.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3365755..3366212 -
Ec-28_003560.2.2Ec-28_003560.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3367871..3367984 -
Ec-28_003560.2.1Ec-28_003560.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3369867..3369949 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_003560.2CDS:Ec-28_003560.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 3365755..3366204 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0035605UTR:Ec-28_003560.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 3366205..3366212 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_003560.2Ec-28_003560.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 3365755..3366204 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_003560.2 ID=Ec-28_003560.2|Name=Ec-28_003560.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=150bp
MKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCG
KSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAII
GDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVSSRCRNGAPSRKG
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spliced messenger RNA

>Ec-28_003560.2 ID=Ec-28_003560.2|Name=Ec-28_003560.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=655bp|location=Sequence derived from alignment at chr_28:3365755..3369949- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CAAGAGAGCACCCGACTCAGCCATCCCGACTCCAGGGAGATTCCAACATG
TTCAACGCACGGGCGCTGATTAGGAGCGGGCCGGAGGCTGCCGCGGCACT
GACAACGAGGTACCAGGAGCAGACAAGCAGCAACAACAATGCGTCGGACG
CGGAGCAGCAACTCCGACAGCCCATCTCGGCCTCCGAAGTAGACGAGGGA
TAGGGATGAAGAAGTACTTGGACGGCCCCATGGACTATGCGAAAAAGCTG
AAATTGCAATTTCGAGTAGGCGATCTGGACTTGCCAGAACGGAGGAAGAG
GTATACCAGCCGTAGGAGAGAGGAAGAGGAGGATAGACACACATGTCCAT
GTGGCAAATCGGAGGAGAGTAGACCCCACATAGTTGGGGAGTGTGAGTTG
TACAGGAAGGAAAGAGAGGATCTCGAGGAGGAAATGAGACAGAGAGGGTG
TGACATGGACAAGTTTGGTAAATTAGACAACAGCGAAAAAACGATCGCGA
TAATTGGGGATAGATGGTGGGCACAAGAGGCCCTAGAGGACGGGGATAAG
ATGTGCAAGAAATTTTTATGGAGTTTGTGGCAGAAACGTAAAGAGCTCCC
AAATGTTGGTGGTGTCTCTAGTAGGTGTAGGAACGGTGCTCCGTCTCGAA
AGGGA
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protein sequence of Ec-28_003560.2

>Ec-28_003560.2 ID=Ec-28_003560.2|Name=Ec-28_003560.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=150bp
MKKYLDGPMDYAKKLKLQFRVGDLDLPERRKRYTSRRREEEEDRHTCPCG
KSEESRPHIVGECELYRKEREDLEEEMRQRGCDMDKFGKLDNSEKTIAII
GDRWWAQEALEDGDKMCKKFLWSLWQKRKELPNVGGVSSRCRNGAPSRKG
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mRNA from alignment at chr_28:3365755..3369949-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_003560.2 ID=Ec-28_003560.2|Name=Ec-28_003560.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4195bp|location=Sequence derived from alignment at chr_28:3365755..3369949- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CAAGAGAGCACCCGACTCAGCCATCCCGACTCCAGGGAGATTCCAACATG
TTCAACGCACGGGCGCTGATTAGGAGCGGGCCGGTGAGTAACCCTGCAGT
CGTGCACATCCCAAGGACAACAAGGATTTCTTAGCTTTTTTTTCTCGATC
CCTCCCCCCACTTTCCACAGCAGGCTGAGATTTGACTGAGCGGCAGTTGC
AGGGTGTGCCGCATGTACGACGTGCCATGGACGATCGGGGAATGTTTGGG
GCAATGTGCGTCAAGTTCTCTTGGAGGGGTGTCACCGAACGTCAAATCTG
TGTCTGTTGGATGGAGCTTTTGCGAAGTGATCAGCCTCTAAATTCGTACC
CGCACATACGCACCCCACCAAGCTGCAGTTTTCTCGTTCCAATCATCCTT
TTCAGTGATCCTTTTGCTTTGCTCATCCTGATGACTCGAGTCTCTCGTTG
AAGCCAAAGCACAAGCGTGTCGACGATCTCAACCTTCAGCAGATCAAACC
CTCTATCCACCCTCGACTTCCACGGAACGACAGATCTGTAGCAAGAGAGA
AGGGTGCGCTTGAAGACGATGACATCATGAAATTTCACTTCAACTTAGAC
AAGGCTTTTTTTAGACTGTGAACTGCTGTAGGCTGTGGCGCACAGAAATT
CATGTACACATCGAACAGCCGAGGGAAAGAGGAGGAGAACGCTGTGGATC
AAACATGCCAGTTGTGGTGTGTCGTGTGTGATGCCCCGCCAACTGCTGTG
GCTTGCGATCAACAACGGCGTTGCCCCAAGTTTTTTCTCTTCTTGTGATG
GGCTCGCGGTCATCCACATCCTCCGCAGCAATTCCACGGGAACCCGAACA
ACACGTTTTCTCCTCGCTCCTCACTGCTGTCTCTCGAAGTGCGTACCACC
AGTGTTGTCTGTCGTTGGAGCACGCTCTTTCGGCGCCCTCGTTGTACGTA
TGTTGCCCAGCTACGCACGTACTCCACCCACACTAAAGTACAAACACACC
CGTTTCGAGATTTGGAGGCATGAGGCGAATCTCAGGAGTGAACCGTTCGG
TGAACGTCCCGATGTATCATATTTTCAGCAGTTTTATGGGTACCACCCGG
CTCCCGAAACACCCACACACAGCAGCAAATAGTTGGGTGGAGCTGGCTTG
ATTGTTGAAACGGGGAACGCGAAGCTTAAGCTCGCCACCGTCGCCTCGCC
TGGGAATCCCAAGACCTCATCCGGCCGTTCGTCGATGTCAAACATGCAAT
ATATTGAATAAACACCAAACTTTCGTGAGTGGGTTCTCTCTCGACCCCAT
AAAAGAGAGGGCAGAGAGTCCCATCTTGTCGTCTCCCTGACACTGCAGGA
TACCGGTAGTCGTTGAACGAGGAAGAGCTAAATAGATACCGCCGTTGTCG
GGATTGTGCTCGATCTTCTATGTTCTCTGCAGCAGCGAAAGAGTCAACGT
GTGGCCAACAGCACGTGACGGCGCAACCGCGGTGGCCTACAGTAGGTACA
CGACGGACAGCAGGGTCTTTTGCGGCGCAACAAACACGTGTGCTGTGTCC
GGAATGTATCAGCAAGATTTTAAGCTGCAACATGGAAGGCGAAGCTGCTC
TCTCAGATACAGTGCGGACGCCTGATGTATTCATGGTACATAACACCGCG
TTTCGAAATATACTCTTAGTTCCAGAGACCCCCCCCCCCCCTACCCCGTG
CGACTCGCCGAATACCTCACGGTGCGCTTGGTGATGTGAGAGCCTGGTCC
GGTGAGAACCCGGAGTGCTCCGCCCCGGCTTTGTAGGAATGCGAGGTCAA
TGGTCTAACGTGTACGGCATTCACGACTATGAGAAATGAGTACACCCCCC
CCTAGCCCGTGGTCCACGCATCGAATCGAAGGCCAGCAAGCCTAGTATGC
ATGGTGATGCAATGTTTGGCGCTTGACTCGTCCATGCGATGCCGTCATGT
CTCTCATCGCAACAGGAGGCTGCCGCGGCACTGACAACGAGGTACCAGGA
GCAGACAAGCAGCAACAACAATGCGTCGGACGCGGAGCAGCAACTCCGAC
AGCCCATCTCGGCCTCCGAAGTAGACGAGGCTAGCCAGATGATCTTCCAG
AGGGCCCCCGCCACCCCTTCTGGTCAGTCTAGTGCTTGAGGCAGCTTAGT
TTTTCAAAAGTTGCATCACGTTGGAGTCGACGAATCCGGCATGTCCTTCG
CATGCCCACGTGTGTATGTCGTTTCGTCCGGTAGGGATGTAGGGATGCAA
GGCTTATTCGCTTGACAATCATTTGCATTGTGAGTTCATGAGCACCCCAC
ACACACTGCGCACCTCTGATCGAAAGCCACCCCTCAGCCTGCGGCGCCGC
CTACGCTTTTGTGAGGTTGAAGTGGTTTCCGTGCAGTCCACGCTGCCCCT
GAAGCTGACACAATCGGTTAAGGATGATTTCGCCGTTTGATTGGTAACTC
CGTGCTATCTTGCCCAGCACATGAAACCTGATTCCGTACTACTGTGGAAA
GTTTAGTGTGTGTGCTCGGTCCCATCCGTTCATCCCCTCTCTTGTCGGTG
TTTGTTGCTCGGGCTTTCGGGTGTTGGGTGAACGGCTCGTGTCGTGTCAT
AGGGGTCCCTTTCTTGTTGGTTCCCTTCTCTTCTCTCTTTCTTCTCCTCC
TCTGTGGGTGTCGTTCGTTTCAAAGCCTTGGATGGGAACGAAGGTAGCGT
TGGACTTGAAACACAACACGCAGTACATTGGGTTGCGAATTCGAAGATTT
TCTGTGAAAGATGGATGGAAGCCGCGATGCTTCGTACATCTTTCCTGTGT
TGGACTACCGTACACGACACAAGATAACACANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATTTTTTAACAGCAGA
AAGGGTTCAAGGCCCGAAAAAGGGGGGGTTGAAGGGGCTTTTTTGAAAGC
TTTTCGAAAAAGCATTGTTTTTTTTTTTGCCCCCTTTTTTTTGGGGGGTT
TTTGGGTTTTAAAAATTGGTCCCGGGGGTTTTTTTTTTTTTTTTTTTTTC
GGTCCCCGGGTTTTTTTCCCCTTTGCCCTTCCCAGGTTTTTTTTTTTTCC
AATTTTTCCCCCCGGTGCCAGATGTTGGGTTGTTTTTGGAAGGCAGTGTT
TTCCCCAGATTTTGGGGGTTGGGGGTTTGTTTTTTTTCCAATTTTTTTCT
TGCAACCCATACCTTTTTCCCTTTAACCTTTTTTGACGTTTTTTTTTGCC
CCCCCCCCCCCCCCGTCAAGCAGCTGGAAACGGTGCAGATGGCAGCGGCC
AAGAAAATACTAGGATGTTCAAGCACAACGAGCAACACTGTATTGAGAGC
AGAATTGGGAATGTACTCTCTTAAAACAAAGAGAGACATGCAGAAGTTGA
AGTGGCAGTACAAGGTAAGTAGAATGTCGGACGATAGACTACCAGCCATG
GTTGACGAGGCAGCTTGGGGAAAAGCGACTCCAGGGAAGAAGGGAATCAG
ATGGGACAAGGTGGTAGAGAAGGTTTGGAAGGAGATAGGAGACGAGGAGG
GAGACGTTGGACACGGAAGGGGTTCGGGGGGTTCAAGACGAAAGTCAAGG
AGATGCTAGAGAGTAGGGAGGAGACAACCCTTCGCAAGAAGGTACGAAGC
GAAGACCACTTGGAGATATACGGGAAGTTGAAAGAAGGGATAGGGATGAA
GAAGTACTTGGACGGCCCCATGGACTATGCGAAAAAGCTGAAATTGCAAT
TTCGAGTAGGCGATCTGGACTTGCCAGAACGGAGGAAGAGGTATACCAGC
CGTAGGAGAGAGGAAGAGGAGGATAGACACACATGTCCATGTGGCAAATC
GGAGGAGAGTAGACCCCACATAGTTGGGGAGTGTGAGTTGTACAGGAAGG
AAAGAGAGGATCTCGAGGAGGAAATGAGACAGAGAGGGTGTGACATGGAC
AAGTTTGGTAAATTAGACAACAGCGAAAAAACGATCGCGATAATTGGGGA
TAGATGGTGGGCACAAGAGGCCCTAGAGGACGGGGATAAGATGTGCAAGA
AATTTTTATGGAGTTTGTGGCAGAAACGTAAAGAGCTCCCAAATGTTGGT
GGTGTCTCTAGTAGGTGTAGGAACGGTGCTCCGTCTCGAAAGGGA
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Coding sequence (CDS) from alignment at chr_28:3365755..3369949-

>Ec-28_003560.2 ID=Ec-28_003560.2|Name=Ec-28_003560.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=450bp|location=Sequence derived from alignment at chr_28:3365755..3369949- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGAAGAAGTACTTGGACGGCCCCATGGACTATGCGAAAAAGCTGAAATT
GCAATTTCGAGTAGGCGATCTGGACTTGCCAGAACGGAGGAAGAGGTATA
CCAGCCGTAGGAGAGAGGAAGAGGAGGATAGACACACATGTCCATGTGGC
AAATCGGAGGAGAGTAGACCCCACATAGTTGGGGAGTGTGAGTTGTACAG
GAAGGAAAGAGAGGATCTCGAGGAGGAAATGAGACAGAGAGGGTGTGACA
TGGACAAGTTTGGTAAATTAGACAACAGCGAAAAAACGATCGCGATAATT
GGGGATAGATGGTGGGCACAAGAGGCCCTAGAGGACGGGGATAAGATGTG
CAAGAAATTTTTATGGAGTTTGTGGCAGAAACGTAAAGAGCTCCCAAATG
TTGGTGGTGTCTCTAGTAGGTGTAGGAACGGTGCTCCGTCTCGAAAGGGA
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Synonyms
The feature 'Ec-28_003560.2' has the following synonyms
Synonym
Esi009_0253
Esi_009_0253