Ec-28_003420.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_003420.1
Unique NameEc-28_003420.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length841
Homology
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BLAST of Ec-28_003420.1 vs. uniprot
Match: D8LTN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN5_ECTSI)

HSP 1 Score: 1564 bits (4050), Expect = 0.000e+0
Identity = 840/840 (100.00%), Postives = 840/840 (100.00%), Query Frame = 1 
Query:    1 MLRRPPKKMPPSSTAVKDKVVRMFGQRSMRTLLDALSHTPVGVVEHVGSVLALCACVVEAGLTASRALTFPSPTVGGVATANGSLAITDEGRKRAAAIVDHARQLRRLHLRANNTEKNIPRSRANKHQMLGPRRAGTIGVKGEEAMMALGDLGKWAIVHKRNLPCLMKILQAAEALLLSDALLVRHFARMIGAQEAREALVEAGIFLGHVTQTCDALVEEVRRRAIAAVSVQRFWRGARVQRHQQAADPGHLGDDSLEEAKVPTAGGTVAFLPASRTNRHVGSDDIHQLAAAEMVRAVDSALFLAGTRTKAAVVLQRWTRIRRSRQYREEARVRMRTERLVTAAVGVQALARGISARRHASRATRRAAXXVTVQAFWRGLLGWKRARSREFGVVFLQRWWRYTTALSHLSRISALAQTRNLESLADSASYVRRITLGIFSHDEPTLGLSASRYPRKVWIHKQWTRQMITPLSPSSVGRLGRSQRDSRLGIADCDHRDASLSLHLAKARFEMEQRSTPKAAGDILRALVTRHFSQPPALGKLTSALRRRKNRVGGDGSLSLTHRTGEMAAVRAGQGQHAPGLTPRFIEGKENHXXXXXXXXXXXXXXXXXXXXGPACAIDGSDGMPVSPGKGPEPRTAVSGAFRGEPLQDIDGAKFPSEIPSRTVQPTLGLASTDRCEVAAGPSAPDGGKSASPCLSIVDEVASQQADAHRKTSRGLGMEYDAPLARPSCQTGNGTDLAARATSTAPLQRAEKATNVPQTPSSPTDAPSAGMRLLHRHRQRHRGDSDEQTAATAAGAPLLPGGCRAAVPHGQCLPPETCRPPPARPSHQFWTAPSRTRPEG 2520
            MLRRPPKKMPPSSTAVKDKVVRMFGQRSMRTLLDALSHTPVGVVEHVGSVLALCACVVEAGLTASRALTFPSPTVGGVATANGSLAITDEGRKRAAAIVDHARQLRRLHLRANNTEKNIPRSRANKHQMLGPRRAGTIGVKGEEAMMALGDLGKWAIVHKRNLPCLMKILQAAEALLLSDALLVRHFARMIGAQEAREALVEAGIFLGHVTQTCDALVEEVRRRAIAAVSVQRFWRGARVQRHQQAADPGHLGDDSLEEAKVPTAGGTVAFLPASRTNRHVGSDDIHQLAAAEMVRAVDSALFLAGTRTKAAVVLQRWTRIRRSRQYREEARVRMRTERLVTAAVGVQALARGISARRHASRATRRAAXXVTVQAFWRGLLGWKRARSREFGVVFLQRWWRYTTALSHLSRISALAQTRNLESLADSASYVRRITLGIFSHDEPTLGLSASRYPRKVWIHKQWTRQMITPLSPSSVGRLGRSQRDSRLGIADCDHRDASLSLHLAKARFEMEQRSTPKAAGDILRALVTRHFSQPPALGKLTSALRRRKNRVGGDGSLSLTHRTGEMAAVRAGQGQHAPGLTPRFIEGKENHXXXXXXXXXXXXXXXXXXXXGPACAIDGSDGMPVSPGKGPEPRTAVSGAFRGEPLQDIDGAKFPSEIPSRTVQPTLGLASTDRCEVAAGPSAPDGGKSASPCLSIVDEVASQQADAHRKTSRGLGMEYDAPLARPSCQTGNGTDLAARATSTAPLQRAEKATNVPQTPSSPTDAPSAGMRLLHRHRQRHRGDSDEQTAATAAGAPLLPGGCRAAVPHGQCLPPETCRPPPARPSHQFWTAPSRTRPEG
Sbjct:    1 MLRRPPKKMPPSSTAVKDKVVRMFGQRSMRTLLDALSHTPVGVVEHVGSVLALCACVVEAGLTASRALTFPSPTVGGVATANGSLAITDEGRKRAAAIVDHARQLRRLHLRANNTEKNIPRSRANKHQMLGPRRAGTIGVKGEEAMMALGDLGKWAIVHKRNLPCLMKILQAAEALLLSDALLVRHFARMIGAQEAREALVEAGIFLGHVTQTCDALVEEVRRRAIAAVSVQRFWRGARVQRHQQAADPGHLGDDSLEEAKVPTAGGTVAFLPASRTNRHVGSDDIHQLAAAEMVRAVDSALFLAGTRTKAAVVLQRWTRIRRSRQYREEARVRMRTERLVTAAVGVQALARGISARRHASRATRRAAXXVTVQAFWRGLLGWKRARSREFGVVFLQRWWRYTTALSHLSRISALAQTRNLESLADSASYVRRITLGIFSHDEPTLGLSASRYPRKVWIHKQWTRQMITPLSPSSVGRLGRSQRDSRLGIADCDHRDASLSLHLAKARFEMEQRSTPKAAGDILRALVTRHFSQPPALGKLTSALRRRKNRVGGDGSLSLTHRTGEMAAVRAGQGQHAPGLTPRFIEGKENHXXXXXXXXXXXXXXXXXXXXGPACAIDGSDGMPVSPGKGPEPRTAVSGAFRGEPLQDIDGAKFPSEIPSRTVQPTLGLASTDRCEVAAGPSAPDGGKSASPCLSIVDEVASQQADAHRKTSRGLGMEYDAPLARPSCQTGNGTDLAARATSTAPLQRAEKATNVPQTPSSPTDAPSAGMRLLHRHRQRHRGDSDEQTAATAAGAPLLPGGCRAAVPHGQCLPPETCRPPPARPSHQFWTAPSRTRPEG 840
[Close]
BLAST of Ec-28_003420.1 vs. uniprot
Match: A0A6H5JN79_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN79_9PHAE)

HSP 1 Score: 427 bits (1098), Expect = 8.180e-131
Identity = 259/399 (64.91%), Postives = 280/399 (70.18%), Query Frame = 1 
Query:    1 MLRRPPKKMPPSSTAVKDKVVRMFGQRSMRTLLDALSHTPVGVVEHVGSVLALCACVVEAGLTASRALTFPSPTVGGVATANGSLAITDEGRKRAAAIVDHARQLRRLHLRANNTEKNIPRSRANKHQMLGPRRAGTIGVKGEEAMMALGDLGKWAIVHKRNLPCLMKILQAAEALLLSDALLVRHFARMIGAQEAREALVEAGIFLGHVTQTCDALVEEVRRRAIAAVSVQRFWRGARVQRH-QQAADPGHLGDDSLEEAKVPTAGGTVAFLPASRTNRHVGSDDIHQLAAAEMVRAVDSALFLAGTRTKAAVVLQRWTRIRRSRQYREEARVRMRTERLVTAAVGVQALARGISARRHASRATRRAAXXVTVQAFWRGLLGWKRARSREFGVVFLQR 1194
            MLRRPPK+M PSS A KD+ V MF +R MRTLLDALSHTPV VVEHVGSVLALCA VVEAGL AS A  FPS +VGGVATANGSLAITDEGRKRAAAIVDHA                                           MMALG L KWAIV +RNLPCLM+ILQAAEAL LSDALLVRHFARMIGAQEAREALVE G+FLGHVTQTCD +VEE +RRAIAAVSV+RFWR ARV+RH QQA DPGH+GD+SL+E K                                  R V+SALFLAGTRT AAVVLQRW RIR SRQ +EEARVRMR ERLVTAAV VQALAR +SARRH S+A RRAA  + +QAFWR LL W RARSREFGVV L+R
Sbjct:  767 MLRRPPKEMSPSSIAAKDEAVPMFDRRPMRTLLDALSHTPVRVVEHVGSVLALCASVVEAGLPASWASAFPSRSVGGVATANGSLAITDEGRKRAAAIVDHA-------------------------------------------MMALGHLWKWAIVRRRNLPCLMQILQAAEALRLSDALLVRHFARMIGAQEAREALVEVGVFLGHVTQTCDVVVEEGKRRAIAAVSVKRFWRRARVRRHHQQATDPGHVGDESLDEVK----------------------------------RVVNSALFLAGTRTTAAVVLQRWNRIRISRQRQEEARVRMRAERLVTAAVRVQALAREMSARRHVSQAARRAAAAMAIQAFWRDLLEWTRARSREFGVVILRR 1088
The following BLAST results are available for this feature:
BLAST of Ec-28_003420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTN5_ECTSI0.000e+0100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JN79_9PHAE8.180e-13164.91Reverse transcriptase domain-containing protein n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:3242457..3245963 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length2523
Hectar predicted targeting categoryother localisation
Gene idEc-28_003420.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003420Ec-28_003420Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 3242457..3245963 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_003420.1.4Ec-28_003420.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3242457..3242760 -
Ec-28_003420.1.3Ec-28_003420.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3243005..3244030 -
Ec-28_003420.1.2Ec-28_003420.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3244440..3245038 -
Ec-28_003420.1.1Ec-28_003420.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 3245370..3245963 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_003420.1CDS:Ec-28_003420.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 3242457..3242760 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_003420.1Ec-28_003420.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 3242457..3245963 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_003420.1 ID=Ec-28_003420.1|Name=Ec-28_003420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=841bp
MLRRPPKKMPPSSTAVKDKVVRMFGQRSMRTLLDALSHTPVGVVEHVGSV
LALCACVVEAGLTASRALTFPSPTVGGVATANGSLAITDEGRKRAAAIVD
HARQLRRLHLRANNTEKNIPRSRANKHQMLGPRRAGTIGVKGEEAMMALG
DLGKWAIVHKRNLPCLMKILQAAEALLLSDALLVRHFARMIGAQEAREAL
VEAGIFLGHVTQTCDALVEEVRRRAIAAVSVQRFWRGARVQRHQQAADPG
HLGDDSLEEAKVPTAGGTVAFLPASRTNRHVGSDDIHQLAAAEMVRAVDS
ALFLAGTRTKAAVVLQRWTRIRRSRQYREEARVRMRTERLVTAAVGVQAL
ARGISARRHASRATRRAAAAVTVQAFWRGLLGWKRARSREFGVVFLQRWW
RYTTALSHLSRISALAQTRNLESLADSASYVRRITLGIFSHDEPTLGLSA
SRYPRKVWIHKQWTRQMITPLSPSSVGRLGRSQRDSRLGIADCDHRDASL
SLHLAKARFEMEQRSTPKAAGDILRALVTRHFSQPPALGKLTSALRRRKN
RVGGDGSLSLTHRTGEMAAVRAGQGQHAPGLTPRFIEGKENHNNNTNTKS
SSNNNDSNSNNNGPACAIDGSDGMPVSPGKGPEPRTAVSGAFRGEPLQDI
DGAKFPSEIPSRTVQPTLGLASTDRCEVAAGPSAPDGGKSASPCLSIVDE
VASQQADAHRKTSRGLGMEYDAPLARPSCQTGNGTDLAARATSTAPLQRA
EKATNVPQTPSSPTDAPSAGMRLLHRHRQRHRGDSDEQTAATAAGAPLLP
GGCRAAVPHGQCLPPETCRPPPARPSHQFWTAPSRTRPEG*
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spliced messenger RNA

>Ec-28_003420.1 ID=Ec-28_003420.1|Name=Ec-28_003420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2523bp|location=Sequence derived from alignment at chr_28:3242457..3245963- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTGCGGAGACCTCCTAAGAAGATGCCGCCTTCTAGCACTGCAGTTAA
GGACAAGGTTGTACGCATGTTCGGCCAACGGTCGATGCGCACCCTTCTAG
ACGCGCTTTCCCACACACCGGTGGGGGTGGTGGAGCACGTGGGTTCGGTG
TTGGCACTGTGCGCGTGTGTGGTCGAGGCCGGTCTCACGGCTTCGCGGGC
CTTGACCTTTCCGAGCCCTACGGTTGGAGGTGTGGCGACCGCAAATGGTT
CCCTTGCTATTACGGATGAAGGGAGGAAGCGGGCGGCCGCGATCGTTGAC
CACGCCAGACAGCTGCGGCGGCTCCATTTAAGGGCGAATAATACCGAGAA
GAACATTCCCAGATCGAGGGCAAACAAGCATCAAATGCTTGGGCCGAGAC
GAGCCGGGACAATCGGTGTAAAGGGCGAAGAAGCGATGATGGCCTTGGGA
GACCTCGGGAAGTGGGCTATCGTTCACAAGCGGAACTTACCGTGTCTCAT
GAAAATTCTTCAAGCGGCCGAAGCTCTTCTGTTGTCAGACGCACTCCTTG
TTCGGCACTTCGCCAGGATGATAGGCGCGCAGGAGGCTCGAGAGGCTCTG
GTCGAGGCGGGGATTTTCCTGGGGCACGTCACGCAGACGTGTGACGCGCT
TGTGGAAGAAGTAAGGAGGAGGGCGATCGCTGCTGTTTCCGTCCAGCGGT
TTTGGAGGGGTGCACGCGTGCAAAGGCACCAGCAGGCCGCAGACCCCGGG
CACTTAGGCGACGACAGTCTCGAGGAGGCGAAGGTTCCAACCGCAGGCGG
GACGGTTGCCTTCCTCCCAGCGAGCAGAACCAATCGTCACGTCGGTTCTG
ACGACATTCATCAATTAGCCGCTGCAGAAATGGTGCGGGCAGTTGACTCC
GCTCTCTTCCTCGCGGGTACTCGAACCAAGGCAGCGGTGGTCCTACAGCG
ATGGACGAGGATTAGGAGAAGCCGACAGTACCGGGAGGAAGCTCGTGTGC
GGATGAGAACGGAGAGATTGGTCACGGCAGCGGTTGGTGTGCAGGCGCTA
GCTCGAGGGATCAGCGCTCGCCGCCATGCGTCTCGAGCGACCAGGCGAGC
GGCAGCGGCAGTGACCGTTCAAGCCTTTTGGCGCGGACTGCTAGGATGGA
AGCGGGCCCGAAGCCGAGAGTTTGGAGTGGTGTTTCTCCAAAGGTGGTGG
CGATACACCACAGCACTGTCTCACCTGTCTCGCATCAGCGCGCTGGCGCA
AACGCGAAATCTGGAATCCCTCGCGGACTCGGCATCTTACGTACGAAGAA
TCACGCTGGGTATCTTTTCGCACGACGAACCCACGCTTGGCTTGTCAGCA
TCTCGGTATCCGCGCAAGGTCTGGATCCACAAGCAGTGGACAAGACAGAT
GATCACACCTCTGTCACCCAGCTCAGTAGGTAGGTTAGGCAGATCCCAAA
GGGATAGCAGACTAGGGATAGCAGACTGTGACCATCGCGATGCATCCCTG
TCTTTGCACTTGGCCAAGGCACGCTTCGAGATGGAACAGCGATCCACGCC
GAAGGCGGCCGGAGACATCCTTCGGGCCTTGGTGACGCGTCATTTTTCCC
AGCCACCCGCCCTGGGTAAACTCACTTCGGCCCTGCGGCGGCGGAAGAAC
CGTGTGGGTGGAGACGGCAGTCTGTCACTCACCCACAGGACGGGGGAAAT
GGCAGCGGTTAGAGCTGGACAGGGCCAACACGCCCCGGGGCTCACACCAC
GATTTATAGAGGGGAAAGAGAACCATAACAACAACACCAACACCAAGAGC
AGCAGCAACAACAACGACAGCAACAGCAACAACAATGGCCCTGCCTGCGC
GATAGATGGAAGTGATGGTATGCCTGTCAGCCCTGGCAAAGGCCCAGAAC
CACGTACGGCAGTATCGGGAGCCTTCCGCGGGGAGCCACTCCAGGACATC
GACGGCGCAAAGTTCCCGTCGGAGATACCGTCAAGGACTGTCCAACCCAC
TTTGGGGCTTGCAAGCACGGACAGGTGCGAGGTAGCTGCGGGGCCTTCGG
CACCCGACGGCGGAAAGAGCGCCAGCCCTTGTTTGTCCATTGTCGACGAA
GTGGCATCCCAGCAGGCGGATGCCCACAGGAAGACATCAAGGGGCTTGGG
GATGGAGTACGACGCCCCTTTGGCAAGACCCTCCTGCCAAACCGGCAACG
GCACCGACCTCGCAGCGAGAGCTACATCGACGGCACCCCTCCAACGAGCC
GAGAAAGCCACCAACGTGCCCCAGACACCCTCGTCGCCAACCGACGCTCC
GTCGGCGGGGATGCGCCTGCTACATCGCCATCGCCAGCGACACCGCGGCG
ACAGCGACGAACAGACCGCGGCAACAGCAGCCGGAGCTCCTCTCCTGCCG
GGAGGATGCCGCGCAGCCGTGCCCCACGGTCAATGTCTCCCGCCCGAAAC
CTGCAGGCCACCGCCAGCGAGACCCAGCCACCAATTCTGGACCGCGCCAT
CACGGACACGTCCGGAGGGCTAG
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protein sequence of Ec-28_003420.1

>Ec-28_003420.1 ID=Ec-28_003420.1|Name=Ec-28_003420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=841bp
MLRRPPKKMPPSSTAVKDKVVRMFGQRSMRTLLDALSHTPVGVVEHVGSV
LALCACVVEAGLTASRALTFPSPTVGGVATANGSLAITDEGRKRAAAIVD
HARQLRRLHLRANNTEKNIPRSRANKHQMLGPRRAGTIGVKGEEAMMALG
DLGKWAIVHKRNLPCLMKILQAAEALLLSDALLVRHFARMIGAQEAREAL
VEAGIFLGHVTQTCDALVEEVRRRAIAAVSVQRFWRGARVQRHQQAADPG
HLGDDSLEEAKVPTAGGTVAFLPASRTNRHVGSDDIHQLAAAEMVRAVDS
ALFLAGTRTKAAVVLQRWTRIRRSRQYREEARVRMRTERLVTAAVGVQAL
ARGISARRHASRATRRAAAAVTVQAFWRGLLGWKRARSREFGVVFLQRWW
RYTTALSHLSRISALAQTRNLESLADSASYVRRITLGIFSHDEPTLGLSA
SRYPRKVWIHKQWTRQMITPLSPSSVGRLGRSQRDSRLGIADCDHRDASL
SLHLAKARFEMEQRSTPKAAGDILRALVTRHFSQPPALGKLTSALRRRKN
RVGGDGSLSLTHRTGEMAAVRAGQGQHAPGLTPRFIEGKENHNNNTNTKS
SSNNNDSNSNNNGPACAIDGSDGMPVSPGKGPEPRTAVSGAFRGEPLQDI
DGAKFPSEIPSRTVQPTLGLASTDRCEVAAGPSAPDGGKSASPCLSIVDE
VASQQADAHRKTSRGLGMEYDAPLARPSCQTGNGTDLAARATSTAPLQRA
EKATNVPQTPSSPTDAPSAGMRLLHRHRQRHRGDSDEQTAATAAGAPLLP
GGCRAAVPHGQCLPPETCRPPPARPSHQFWTAPSRTRPEG*
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mRNA from alignment at chr_28:3242457..3245963-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_003420.1 ID=Ec-28_003420.1|Name=Ec-28_003420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3507bp|location=Sequence derived from alignment at chr_28:3242457..3245963- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTGCGGAGACCTCCTAAGAAGATGCCGCCTTCTAGCACTGCAGTTAA
GGACAAGGTTGTACGCATGTTCGGCCAACGGTCGATGCGCACCCTTCTAG
ACGCGCTTTCCCACACACCGGTGGGGGTGGTGGAGCACGTGGGTTCGGTG
TTGGCACTGTGCGCGTGTGTGGTCGAGGCCGGTCTCACGGCTTCGCGGGC
CTTGACCTTTCCGAGCCCTACGGTTGGAGGTGTGGCGACCGCAAATGGTT
CCCTTGCTATTACGGATGAAGGGAGGAAGCGGGCGGCCGCGATCGTTGAC
CACGCCAGACAGCTGCGGCGGCTCCATTTAAGGGCGAATAATACCGAGAA
GAACATTCCCAGATCGAGGGCAAACAAGCATCAAATGCTTGGGCCGAGAC
GAGCCGGGACAATCGGTGTAAAGGGCGAAGAAGCGATGATGGCCTTGGGA
GACCTCGGGAAGTGGGCTATCGTTCACAAGCGGAACTTACCGTGTCTCAT
GAAAATTCTTCAAGCGGCCGAAGCTCTTCTGTTGTCAGACGCACTCCTTG
TTCGGCACTTCGCCAGGATGATAGGCGCGCAGGAGGCTCGAGAGGTGAAT
GGGTGTCTCAATTGGAGAGGGAGTCAAGAAGTGTGGTTTGTTGCGCCAGA
ATACATATGCATAGCTTCGTCAGCACCAGCAAGCACTCCGGGTAACGAAG
TGTTACAGTTCGTCAAACTGGTCGCCTCGGAACCAAACCTCTGACTCCAT
GCCCTACGGTAAGCCTTGGTTTGTCACCACGTTCCTTTTCCGGGGATGCC
CAAGCTTAGTAGCTATTGCTGGTGTGTCTTAACCTTGATTTAGAGTACAA
GGGTGTGAGTCAACCGCGTGCAACGCACTAACGACAACTCGGTGTCGTCA
CTTTGCTTGCTTCTCTATCCAATAGGCTCTGGTCGAGGCGGGGATTTTCC
TGGGGCACGTCACGCAGACGTGTGACGCGCTTGTGGAAGAAGTAAGGAGG
AGGGCGATCGCTGCTGTTTCCGTCCAGCGGTTTTGGAGGGGTGCACGCGT
GCAAAGGCACCAGCAGGCCGCAGACCCCGGGCACTTAGGCGACGACAGTC
TCGAGGAGGCGAAGGTTCCAACCGCAGGCGGGACGGTTGCCTTCCTCCCA
GCGAGCAGAACCAATCGTCACGTCGGTTCTGACGACATTCATCAATTAGC
CGCTGCAGAAATGGTGCGGGCAGTTGACTCCGCTCTCTTCCTCGCGGGTA
CTCGAACCAAGGCAGCGGTGGTCCTACAGCGATGGACGAGGATTAGGAGA
AGCCGACAGTACCGGGAGGAAGCTCGTGTGCGGATGAGAACGGAGAGATT
GGTCACGGCAGCGGTTGGTGTGCAGGCGCTAGCTCGAGGGATCAGCGCTC
GCCGCCATGCGTCTCGAGCGACCAGGCGAGCGGCAGCGGCAGTGACCGTT
CAAGCCTTTTGGCGCGGACTGCTAGGATGGAAGCGGGCCCGAAGCCGAGA
GTTTGGAGTGGTGTTTCTCCAAAGGTAACATGTATCCTTTCGCGAAATTG
ATACGACAACCTGTAACAACAGCTAGTTGGTTTTGTAGCGAAGACTGACT
CACAATTCAGTCTTTTGTCTTCTCCATGGTGAGCTCAGAGGCGTTGCTAC
TTATTCTTGGGACATCGATGATAGGGCAGCCCTAACGACCCGTTGCGAAA
GTTGGGTATGGCGGCAACGGATCATGGACTTCAAACGTCATTCCCTCAAC
CAACGTTTGGAATCTTCGCTCTATAATAGAGCATATAATGGACTTTTTTC
AATAGAGGTAGACAGCAAGCATCTCTCGAGCTAGTTCTCGCCGCGACCGG
GAACACCACACTGCTCCGTGCCAGTATCATTTCAACAGTCTCGATAATAC
ATGACCTTCTCTCTTTTCTTCATTTTTCTCAAGGTGGTGGCGATACACCA
CAGCACTGTCTCACCTGTCTCGCATCAGCGCGCTGGCGCAAACGCGAAAT
CTGGAATCCCTCGCGGACTCGGCATCTTACGTACGAAGAATCACGCTGGG
TATCTTTTCGCACGACGAACCCACGCTTGGCTTGTCAGCATCTCGGTATC
CGCGCAAGGTCTGGATCCACAAGCAGTGGACAAGACAGATGATCACACCT
CTGTCACCCAGCTCAGTAGGTAGGTTAGGCAGATCCCAAAGGGATAGCAG
ACTAGGGATAGCAGACTGTGACCATCGCGATGCATCCCTGTCTTTGCACT
TGGCCAAGGCACGCTTCGAGATGGAACAGCGATCCACGCCGAAGGCGGCC
GGAGACATCCTTCGGGCCTTGGTGACGCGTCATTTTTCCCAGCCACCCGC
CCTGGGTAAACTCACTTCGGCCCTGCGGCGGCGGAAGAACCGTGTGGGTG
GAGACGGCAGTCTGTCACTCACCCACAGGACGGGGGAAATGGCAGCGGTT
AGAGCTGGACAGGGCCAACACGCCCCGGGGCTCACACCACGATTTATAGA
GGGGAAAGAGAACCATAACAACAACACCAACACCAAGAGCAGCAGCAACA
ACAACGACAGCAACAGCAACAACAATGGCCCTGCCTGCGCGATAGATGGA
AGTGATGGTATGCCTGTCAGCCCTGGCAAAGGCCCAGAACCACGTACGGC
AGTATCGGGAGCCTTCCGCGGGGAGCCACTCCAGGACATCGACGGCGCAA
AGTTCCCGTCGGAGATACCGTCAAGGACTGTCCAACCCACTTTGGGGCTT
GCAAGCACGGACAGGTGCGAGGTAGCTGCGGGGCCTTCGGCACCCGACGG
CGGAAAGAGCGCCAGCCCTTGTTTGTCCATTGTCGACGAAGTGGCATCCC
AGCAGGCGGATGCCCACAGGAAGACATCAAGGGGCTTGGGGATGGAGTAC
GACGCCCCTTTGGCAAGACCCTCCTGCCAAACCGGCAACGGCACCGACCT
CGCAGCGAGGTAAGGGCACCGATGACAGTAGGTTTCGCACACTGTACCCC
AAACTTGGCCTGGACAGCCACGACGCTCCCCTCACCTCTCCCTCACATTT
GTAAGCTGTTTGTCACCCGCCGTTTGCAATCCAGTGCGAACCTTGTCTCG
AAACTGACCAGTTGCACAACGTCGAACGACCCTTCATACACGTTACTATT
CAAGAATCGTATTTCTGACACCACCCGCCACGAAACGTGCTTGATCAAAT
CAGAGCTACATCGACGGCACCCCTCCAACGAGCCGAGAAAGCCACCAACG
TGCCCCAGACACCCTCGTCGCCAACCGACGCTCCGTCGGCGGGGATGCGC
CTGCTACATCGCCATCGCCAGCGACACCGCGGCGACAGCGACGAACAGAC
CGCGGCAACAGCAGCCGGAGCTCCTCTCCTGCCGGGAGGATGCCGCGCAG
CCGTGCCCCACGGTCAATGTCTCCCGCCCGAAACCTGCAGGCCACCGCCA
GCGAGACCCAGCCACCAATTCTGGACCGCGCCATCACGGACACGTCCGGA
GGGCTAG
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Coding sequence (CDS) from alignment at chr_28:3242457..3245963-

>Ec-28_003420.1 ID=Ec-28_003420.1|Name=Ec-28_003420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=2523bp|location=Sequence derived from alignment at chr_28:3242457..3245963- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTTGCGGAGACCTCCTAAGAAGATGCCGCCTTCTAGCACTGCAGTTAA
GGACAAGGTTGTACGCATGTTCGGCCAACGGTCGATGCGCACCCTTCTAG
ACGCGCTTTCCCACACACCGGTGGGGGTGGTGGAGCACGTGGGTTCGGTG
TTGGCACTGTGCGCGTGTGTGGTCGAGGCCGGTCTCACGGCTTCGCGGGC
CTTGACCTTTCCGAGCCCTACGGTTGGAGGTGTGGCGACCGCAAATGGTT
CCCTTGCTATTACGGATGAAGGGAGGAAGCGGGCGGCCGCGATCGTTGAC
CACGCCAGACAGCTGCGGCGGCTCCATTTAAGGGCGAATAATACCGAGAA
GAACATTCCCAGATCGAGGGCAAACAAGCATCAAATGCTTGGGCCGAGAC
GAGCCGGGACAATCGGTGTAAAGGGCGAAGAAGCGATGATGGCCTTGGGA
GACCTCGGGAAGTGGGCTATCGTTCACAAGCGGAACTTACCGTGTCTCAT
GAAAATTCTTCAAGCGGCCGAAGCTCTTCTGTTGTCAGACGCACTCCTTG
TTCGGCACTTCGCCAGGATGATAGGCGCGCAGGAGGCTCGAGAGGCTCTG
GTCGAGGCGGGGATTTTCCTGGGGCACGTCACGCAGACGTGTGACGCGCT
TGTGGAAGAAGTAAGGAGGAGGGCGATCGCTGCTGTTTCCGTCCAGCGGT
TTTGGAGGGGTGCACGCGTGCAAAGGCACCAGCAGGCCGCAGACCCCGGG
CACTTAGGCGACGACAGTCTCGAGGAGGCGAAGGTTCCAACCGCAGGCGG
GACGGTTGCCTTCCTCCCAGCGAGCAGAACCAATCGTCACGTCGGTTCTG
ACGACATTCATCAATTAGCCGCTGCAGAAATGGTGCGGGCAGTTGACTCC
GCTCTCTTCCTCGCGGGTACTCGAACCAAGGCAGCGGTGGTCCTACAGCG
ATGGACGAGGATTAGGAGAAGCCGACAGTACCGGGAGGAAGCTCGTGTGC
GGATGAGAACGGAGAGATTGGTCACGGCAGCGGTTGGTGTGCAGGCGCTA
GCTCGAGGGATCAGCGCTCGCCGCCATGCGTCTCGAGCGACCAGGCGAGC
GGCAGCGGCAGTGACCGTTCAAGCCTTTTGGCGCGGACTGCTAGGATGGA
AGCGGGCCCGAAGCCGAGAGTTTGGAGTGGTGTTTCTCCAAAGGTGGTGG
CGATACACCACAGCACTGTCTCACCTGTCTCGCATCAGCGCGCTGGCGCA
AACGCGAAATCTGGAATCCCTCGCGGACTCGGCATCTTACGTACGAAGAA
TCACGCTGGGTATCTTTTCGCACGACGAACCCACGCTTGGCTTGTCAGCA
TCTCGGTATCCGCGCAAGGTCTGGATCCACAAGCAGTGGACAAGACAGAT
GATCACACCTCTGTCACCCAGCTCAGTAGGTAGGTTAGGCAGATCCCAAA
GGGATAGCAGACTAGGGATAGCAGACTGTGACCATCGCGATGCATCCCTG
TCTTTGCACTTGGCCAAGGCACGCTTCGAGATGGAACAGCGATCCACGCC
GAAGGCGGCCGGAGACATCCTTCGGGCCTTGGTGACGCGTCATTTTTCCC
AGCCACCCGCCCTGGGTAAACTCACTTCGGCCCTGCGGCGGCGGAAGAAC
CGTGTGGGTGGAGACGGCAGTCTGTCACTCACCCACAGGACGGGGGAAAT
GGCAGCGGTTAGAGCTGGACAGGGCCAACACGCCCCGGGGCTCACACCAC
GATTTATAGAGGGGAAAGAGAACCATAACAACAACACCAACACCAAGAGC
AGCAGCAACAACAACGACAGCAACAGCAACAACAATGGCCCTGCCTGCGC
GATAGATGGAAGTGATGGTATGCCTGTCAGCCCTGGCAAAGGCCCAGAAC
CACGTACGGCAGTATCGGGAGCCTTCCGCGGGGAGCCACTCCAGGACATC
GACGGCGCAAAGTTCCCGTCGGAGATACCGTCAAGGACTGTCCAACCCAC
TTTGGGGCTTGCAAGCACGGACAGGTGCGAGGTAGCTGCGGGGCCTTCGG
CACCCGACGGCGGAAAGAGCGCCAGCCCTTGTTTGTCCATTGTCGACGAA
GTGGCATCCCAGCAGGCGGATGCCCACAGGAAGACATCAAGGGGCTTGGG
GATGGAGTACGACGCCCCTTTGGCAAGACCCTCCTGCCAAACCGGCAACG
GCACCGACCTCGCAGCGAGAGCTACATCGACGGCACCCCTCCAACGAGCC
GAGAAAGCCACCAACGTGCCCCAGACACCCTCGTCGCCAACCGACGCTCC
GTCGGCGGGGATGCGCCTGCTACATCGCCATCGCCAGCGACACCGCGGCG
ACAGCGACGAACAGACCGCGGCAACAGCAGCCGGAGCTCCTCTCCTGCCG
GGAGGATGCCGCGCAGCCGTGCCCCACGGTCAATGTCTCCCGCCCGAAAC
CTGCAGGCCACCGCCAGCGAGACCCAGCCACCAATTCTGGACCGCGCCAT
CACGGACACGTCCGGAGGGCTAG
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Synonyms
The feature 'Ec-28_003420.1' has the following synonyms
Synonym
Esi0009_0067
Esi_0009_0067