Ec-00_001920.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_001920.1
Unique Name	Ec-00_001920.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	575

Homology

[Close]

BLAST of Ec-00_001920.1 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI)

HSP 1 Score: 1189 bits (3077), Expect = 0.000e+0
Identity = 574/574 (100.00%), Postives = 574/574 (100.00%), Query Frame = 1

Query:    1 MTPAPFASGMVGAVAVFGMLAPAAVDGHGFVIEPISRQYLRSQEFNDGYVHSVERWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEMPTVPEPTXXXXXXXXXXXXXXXXXXXXXEQTVAAPVYEMPVTLPVEASYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSDGVCDHACGGDEADYCGGFDAFDLYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFKFGGTR 1722
            MTPAPFASGMVGAVAVFGMLAPAAVDGHGFVIEPISRQYLRSQEFNDGYVHSVERWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEMPTVPEPTXXXXXXXXXXXXXXXXXXXXXEQTVAAPVYEMPVTLPVEASYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSDGVCDHACGGDEADYCGGFDAFDLYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFKFGGTR
Sbjct:   22 MTPAPFASGMVGAVAVFGMLAPAAVDGHGFVIEPISRQYLRSQEFNDGYVHSVERWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEMPTVPEPTXXXXXXXXXXXXXXXXXXXXXEQTVAAPVYEMPVTLPVEASYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSDGVCDHACGGDEADYCGGFDAFDLYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFKFGGTR 595

[Close]

BLAST of Ec-00_001920.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI)

HSP 1 Score: 1018 bits (2633), Expect = 0.000e+0
Identity = 501/626 (80.03%), Postives = 526/626 (84.03%), Query Frame = 1

Query:    1 MTPAPFASGMVGAVAVFGMLAPAAVDGHGFVIEPISRQYLRSQEFNDGYVHSVERWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEM----PTVPEPTXXXXXXXXXXXXXXXXXXXXXEQT--------------------------------------------------VAAPVYEMPVTLPVEASYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSDGVCDHACGGDEADYCGGFDAFDLYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFKFGG 1716
            MTPAPF SGM+G VAVFGMLAPAAV+GHGF IEPISRQYLRS+EFN+G  + VE+WAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYST NTLW PISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPD VVTQDCLNMYPLDRDETD WNSPIDPDYPGRFFVNPECRG+N ETDQ+GRP+L+ G+ GLDNGYINVGRYHLPNIQC+HCVLQMKYYAYVGCHHPGYHEFEPEWPG+CAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL+ADGE     P  P P     XXXXXXXXXXXXXXXXX                                                     VAAPVYEMPVT+PV+  YSYVGCFAD+K DRVFEYM+TS TMTTAVCLEYCL+RRATYMATQYG ECWCSVDAE EYDRHSDGVCDHACGGD AD CGGFDAFDLYKITEP EPTGDEYVGCFAD+ ED +LG EIK QPDMTQAVCRTYCE+ DA FYATQ G+ECWCGMS +EEDY R GRGSCLAGCSGDP VACGGF+AFNLFKF G
Sbjct:    1 MTPAPFTSGMMGVVAVFGMLAPAAVEGHGFCIEPISRQYLRSKEFNEGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAPAAPTPDPEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARXXXXSXXXXXXXXXXXXXXXXXXXXPVAAPVYEMPVTMPVDEGYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFDG 626

[Close]

BLAST of Ec-00_001920.1 vs. uniprot
Match: A0A6H5JN72_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN72_9PHAE)

HSP 1 Score: 845 bits (2183), Expect = 4.830e-303
Identity = 445/657 (67.73%), Postives = 487/657 (74.12%), Query Frame = 1

Query:   37 AVAVFGMLA-----PAAVDGHGFVIEPISRQYLRSQEFNDGYVHSVERWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDN-------------------GYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGE-MPTVPEPTXXXXXXXXXXXXXXXXXXXXX------------------------------------EQTVAAPVYEMP----------VTLPVEASYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSD----------GVCDHACGGDEADY----CGGFDAFD------------LYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFKFGG 1716
            AV V  M+      P AV+GHGF IEPISRQYLRS+EFNDG    VE+WAGSFNGGGADAVQARTIDNIDPDILADYG GDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYST NTLW PISTY SGSIIELKAVINNNHWGHIEYFLCDTADMDDPD VVTQDCLNMYPLDRDETD WNSPIDPDYPGRFFVNPECRG+  ETDQSGR +L+ G+ GLD+                   GYIN GRYHLPNIQC+HCVLQMKYYAYVGCHHPGYHEF+PEWPG+CAP+KE+WLPHKNPGCSDEGQKWGNVFFGCSDITLVADG+  PT PEPTXXXXXXXXXXXXXXXXXXXXX                                    EQ VAA VYEM             +PVEA Y++VGCF+DNK DRV E M TS  MT A+C E+C++RRATYMATQYG ECWCS D++ +Y RHSD          G+C   C GD+       C   +A +            LYKITEP EP G+EYVGCFAD+ +D +L  EIK QPDMTQAVCRTYCE   A+FYATQ G+ECWCG S+++EDY R G GSC+A CSGDP  ACGGF++FNLFK  G
Sbjct:   15 AVVVIAMIVAMPYVPTAVEGHGFCIEPISRQYLRSKEFNDGGEFYVEKWAGSFNGGGADAVQARTIDNIDPDILADYGDGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQSGRSMLNDGEVGLDHVSIMYAYQVYGTSSWRSAKGYINTGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFDPEWPGDCAPNKEEWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGKTFPTAPEPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQPVAASVYEMXXXXXXXXXXXADVPVEA-YTHVGCFSDNKEDRVLEAMITSSAMTGAMCYEHCVDRRATYMATQYGFECWCSHDSDLDYARHSDDLERVDGRDYGLCGTRCEGDKVRILHGSCRQREALENHAMGEIRNLHYLYKITEPTEPEGEEYVGCFADDGDDRLLKNEIKYQPDMTQAVCRTYCEGFGAHFYATQYGDECWCGTSDDKEDYKRHGHGSCVAQCSGDPTTACGGFDSFNLFKLKG 670

[Close]

BLAST of Ec-00_001920.1 vs. uniprot
Match: A0A6H5JMP7_9PHAE (Chitin-binding type-4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP7_9PHAE)

HSP 1 Score: 654 bits (1687), Expect = 1.270e-231
Identity = 297/324 (91.67%), Postives = 310/324 (95.68%), Query Frame = 1

Query:    1 MTPAPFASGMVGAVAVFGMLAPAAVDGHGFVIEPISRQYLRSQEFNDGYVHSVERWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL 972
            MTPAPFA GM+G VAVFGMLAPAAV+GHGFVIEPISRQYLRS+EFNDG  + VE+WAGSFNGGGADAVQARTIDNIDPD+LADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYST NTLW PISTY SGSIIELKAVINNNHWGHIEYFLCDTADMDDPD VVTQDCLNMYPLDRDETD WNSPIDPDYPGRFFVNPECRG+  ETDQ+GRP+L+ G+ GLDNGYINVGRYHLPNIQC+HCVLQMKYYAYVGCHHPGYHEFEPEWPG+CAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL
Sbjct:   43 MTPAPFAPGMMGVVAVFGMLAPAAVEGHGFVIEPISRQYLRSKEFNDGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL 366

[Close]

BLAST of Ec-00_001920.1 vs. uniprot
Match: D8LED5_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED5_ECTSI)

HSP 1 Score: 655 bits (1689), Expect = 2.120e-231
Identity = 316/484 (65.29%), Postives = 344/484 (71.07%), Query Frame = 1

Query:  295 GERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEMPTVPEPTXXXXXXXXXXXXXXXXXXXXXEQTVAAPVYEMPVTLPVEASYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSD------GVCDHACGGDEADYCGGFDAFDLYKITEPREPT-------GDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFK 1707
            GERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYST NTLW PISTY SGSIIE++AVINNNHWGHIEYFLCDTADMDD D VVTQDCLN YPLDRDETD WNSPIDP+YPGRFFVNPECRG+NEETDQSGRP L+GG  GLD GYIN GRYHLPNIQC+HCVLQMKYYAYVGCHHPGYHEFEPEWPG+CAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVA+GE+     P+                     +  V  P   +P  +P+                               +C E+C    A YMATQ+G ECWCS D + +Y RHSD      G+C  AC GD    C    A D   +   R           DEYVGCFAD+PED +LG EIK QPDMTQAVCRTYCE  DA+FYATQ G+ECWCGMS +EEDY R G GSCL  CSGDP   CGG +AFNL+K
Sbjct:    2 GERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYESGSIIEIRAVINNNHWGHIEYFLCDTADMDDADGVVTQDCLNKYPLDRDETDWWNSPIDPNYPGRFFVNPECRGENEETDQSGRPELTGGGLGLDKGYINNGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVANGEIDLQGNPSCTCRRTYHRDLRNNINT----QFLVQIPTPPIPEQVPL------------------------------CMCYEHCYSEGAAYMATQFGFECWCSDDTDLDYSRHSDNIDGGDGLCTTACQGDT---CWRERALDACAVLVDRRALLVEEGDEVDEYVGCFADDPEDRLLGNEIKYQPDMTQAVCRTYCEGYDAHFYATQYGDECWCGMSNDEEDYKRHGSGSCLMECSGDPGTVCGGNDAFNLYK 448

[Close]

BLAST of Ec-00_001920.1 vs. uniprot
Match: A0A6H5JNS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS7_9PHAE)

HSP 1 Score: 535 bits (1377), Expect = 2.500e-186
Identity = 237/270 (87.78%), Postives = 251/270 (92.96%), Query Frame = 1

Query:  181 NGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEM 990
            NG GAD VQARTI NIDPD+LADYG G+ WIVGAAWD GERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYST NTLW PISTY SGSIIE++ VINNNHWGHIEYFLCDTADMDDPD VVTQDCLNM+PLDRDETD WNSPID +YPGRFFVNP+CRG NEETDQSGRPVL+GG  GLD GYIN GRYHLPNIQC+HCVLQMKYYAYVGCHHPGYHEF+PEWPG+CAPDKEDWLPHKNPGC DEG+KWGNVFFGCSDITLVA+GE+
Sbjct:    5 NGTGADEVQARTITNIDPDVLADYGDGNYWIVGAAWDMGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYESGSIIEIRTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMHPLDRDETDWWNSPIDQEYPGRFFVNPDCRGGNEETDQSGRPVLTGGGLGLDKGYINNGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFDPEWPGDCAPDKEDWLPHKNPGCGDEGRKWGNVFFGCSDITLVANGEI 274

[Close]

BLAST of Ec-00_001920.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 3.310e-111
Identity = 165/229 (72.05%), Postives = 180/229 (78.60%), Query Frame = 1

Query: 1105 MPVTLPVEASYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSDGVCDHACGGDEADYCGGFDAFDLYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACG------------------------GFNAFNLFKFGGT 1719
            MPV++P E  YSYVGCFAD+K DRVFEYM+TS TMTTAVCLEYCL+RRAT+MATQ+GIECWCSVDAE EYDRHSDGVCD  CGG+  D CGGFDAFDLYKITEP EPTGDEYVGCFAD+ ED +LG EIK QPDMTQ VCRTYCE+ DA FYATQ G+ECWCGMSE+E+DY R GRGSCLAGCSGDP VACG                        GF+AFNLFKF G 
Sbjct:    1 MPVSMPAEEGYSYVGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFMATQFGIECWCSVDAEIEYDRHSDGVCDCECGGEATDICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQTVCRTYCEERDAYFYATQYGDECWCGMSEDEQDYKRHGRGSCLAGCSGDPTVACGRDFQVVIYKHESFQPFLAVTLVPGGFDAFNLFKFDGV 229

[Close]

BLAST of Ec-00_001920.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI)

HSP 1 Score: 343 bits (879), Expect = 1.780e-108
Identity = 192/468 (41.03%), Postives = 251/468 (53.63%), Query Frame = 1

Query:  100 PISRQYLRSQEFNDGYVHSVERWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEP-EWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEMPT---VPEPTXXXXXXXXXXXXXXXXXXXXXEQTVAAPVYEMPVTLPVEASYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSDGVCDHACGGDEADYCGGFDAFDLYKI-------------TEPR-EPTGDEYVGC 1449
            P+SRQ  R  +F       VE     +N  G   V+ R  DN+D   L  YGGG+ + +      GE   N NYLE+++IA  HGVCGDP Q   +  N YST+N  W P+ ++TSG ++E+  V+N  HWGH E+F+C+T DMDDPD V TQ+C NM+PL R + DG  SPIDP+YPGR++V+PECR   EET+QS   +          GY    RY LP+I+C+HC+LQM YY    C H GY EF P  WP  CAP+K DW+      C   GQ +   F+ CSD ++ +DG  P    +P+P                      ++       EM         Y YVGC+ D + DR+      S  MT   C EYC E  A YMATQY  EC+CS D + +Y+RH   +CD AC GDE + CGG +AFDLY+I             +EP  EPT     GC
Sbjct:   27 PMSRQLSRGIDFKAWDDPEVEFCPHCYNARGPKYVKQRAYDNVDSATLDAYGGGEEFPLYF----GEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECR--EEETEQSSNSI---------EGYNIKMRYVLPDIECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQ-YPEEFWACSDFSMTSDGSTPADAPMPDPVDEED-----------------DEDSTDGGMEM---------YEYVGCYTDRQDDRILGDKLDSDLMTADFCYEYCSEIGAAYMATQYAFECFCSADEDLDYERHGTAMCDKACRGDEGETCGGENAFDLYRIMPSMDLPTPATPFSEPEPEPTTPVSDGC 452

[Close]

BLAST of Ec-00_001920.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 2.430e-100
Identity = 191/490 (38.98%), Postives = 243/490 (49.59%), Query Frame = 1

Query:  157 VERWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWI-VGAAWDKGERCPNNNYLESDKIAVGHGVCGDPP---QGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLP-NIQCDHCVLQMKYYAYVGCHHPGYHEFEP-EWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGE--------------MPTVPEPTXXXXXXXXXXXXXXXXXXXXXEQTVAAPVYEMPVTL-----------------------------------PVEAS-------------YSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRH-----SDGVCDHACGGDEADYCGGFDAFDLYKI 1407
            +E+ AG++N GG   VQ R     DP ILA+YG G  W  +   +DKGE  PN NY+E   I+V HGVCGDP    QGG D  NTYST N  W  +  +  G  +E+KAV+   H+GH+E+F+CDT D+DDPDDV TQ+C N YPL R E DG NSPIDP+YPGR++ +P CR    E D   R   +GG      GY+    Y LP N+ C+HCVLQM YY    C+HPGY EF P  W  ECAP+K DW+      C D        F+ CSDI + A+                +    +P                          A P++  P                                      P+E +               YVGCF DNK DR+      S  MTT VCL +C E  A +MATQ+G ECWCS D   +Y+RH     +D VCD +C GD+   CGGF++FDLYK+
Sbjct:   13 LEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDG--WYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGQDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDDVATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWR---AGG------GYVMTMNYDLPENLVCEHCVLQMWYYTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITAETNWCLPCPFFHRICRWIVACRDPDAQPRSRPTATDAPVDATAEPTAAATAEPLHPTPXXXXXXXXXXXXXTPEPTXXXXXXXXXXXXXGTTMTPEPIETTPPPTDGDVGDGEEAEYVGCFHDNKEDRILGDKLDSVDMTTEVCLAHCTELGAAFMATQFGFECWCSADELLDYERHYQMNDADAVCDMSCRGDKTQPCGGFNSFDLYKL 491

[Close]

BLAST of Ec-00_001920.1 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 2.620e-75
Identity = 135/331 (40.79%), Postives = 192/331 (58.01%), Query Frame = 1

Query:   28 MVGAVAVFGMLAPAAVDGHGFVIEPISRQYLRSQEFNDGYVHSVERWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPV--LSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEP-EWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEMPTVPEPT 1011
            MV    V   LA     GH + + P+SR +  S+ F D    + +     +N  G+   +AR I+ +DPD+L  +GGG  + +          PN NYLE +++AV HGVCGDP Q      NTYST+++ W P++TY SG ++E   V+N +HWGH+E+F+C+  +  DPD + TQ+C N YPL R E D  NSPIDP++PGR++ +P CRGQ  E DQ+ +P+  +SG +  +        RY LP+I+C HC+LQM Y+    CHH GY EF P  WP  CAP+KEDW+      C  +G  +   F+ CSD ++  D    T P PT
Sbjct:    1 MVRVCTVVLALALRKAQGHIYELYPMSRSFANSESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDPDVLESHGGGSEFPLAFV----PLAPNGNYLEPNEVAVRHGVCGDPEQTKPAGSNTYSTASSNWEPLATYRSGQVLEFVIVMNAHHWGHLEFFICNADN--DPDGIPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQT-KPLHAISGENMKM--------RYVLPDIECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTREACG-QGGYYPEEFWACSDFSITRDA---TPPSPT 312

The following BLAST results are available for this feature:

BLAST of Ec-00_001920.1 vs. uniprot

BLAST of Ec-00_001920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LED9_ECTSI	0.000e+0	100.00	EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288...	[more]
D8LED7_ECTSI	0.000e+0	80.03	EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288...	[more]
A0A6H5JN72_9PHAE	4.830e-303	67.73	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5JMP7_9PHAE	1.270e-231	91.67	Chitin-binding type-4 domain-containing protein n=...	[more]
D8LED5_ECTSI	2.120e-231	65.29	EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288...	[more]
A0A6H5JNS7_9PHAE	2.500e-186	87.78	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JMV6_9PHAE	3.310e-111	72.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LMS9_ECTSI	1.780e-108	41.03	EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LM...	[more]
D7FU28_ECTSI	2.430e-100	38.98	EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288...	[more]
D7FZR0_ECTSI	2.620e-75	40.79	EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:2151906..2158011 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	1199.9
Seed ortholog evalue	0.0
Seed eggNOG ortholog	2880.D8LED9
Length	1725
KEGG ko	ko:K01315
KEGG Pathway	ko04080,ko04610,ko05150,ko05164,map04080,map04610,map05150,map05164
Hectar predicted targeting category	signal peptide
Gene id	Ec-00_001920.1
EggNOG free text desc.	protein xylosyltransferase activity
EggNOG OGs	KOG4157@1,KOG4157@2759
EC	3.4.21.7
COG Functional cat.	U
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko01002,ko04147,ko04516

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_001920	Ec-00_001920	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 2151906..2158011 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001920.1.1	Ec-00_001920.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 2151906..2152048 +
Ec-00_001920.1.2	Ec-00_001920.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 2152542..2152588 +
Ec-00_001920.1.3	Ec-00_001920.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 2153305..2153489 +
Ec-00_001920.1.4	Ec-00_001920.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 2153805..2153921 +
Ec-00_001920.1.5	Ec-00_001920.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 2154357..2154396 +
Ec-00_001920.1.6	Ec-00_001920.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 2154609..2154808 +
Ec-00_001920.1.7	Ec-00_001920.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 2155213..2155285 +
Ec-00_001920.1.8	Ec-00_001920.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 2155581..2155757 +
Ec-00_001920.1.9	Ec-00_001920.1.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 2156050..2156285 +
Ec-00_001920.1.10	Ec-00_001920.1.10	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 2156567..2156741 +
Ec-00_001920.1.11	Ec-00_001920.1.11	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 2157065..2157240 +
Ec-00_001920.1.12	Ec-00_001920.1.12	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 2157550..2157658 +
Ec-00_001920.1.13	Ec-00_001920.1.13	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 2157965..2158011 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001920.1	CDS:Ec-00_001920.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 2151906..2152048 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_001920.1	Ec-00_001920.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 2151906..2158011 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:2151906..2158011+
coding sequence from alignment at chr_00:2151906..2158011+

mRNA sequence

>Ec-00_001920.1 ID=Ec-00_001920.1|Name=Ec-00_001920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=575bp
MTPAPFASGMVGAVAVFGMLAPAAVDGHGFVIEPISRQYLRSQEFNDGYV
HSVERWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGE
RCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSG
SIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETD
GWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVG
RYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPH
KNPGCSDEGQKWGNVFFGCSDITLVADGEMPTVPEPTPEPTPEPTPEPTP
EPEPTAEPEQTVAAPVYEMPVTLPVEASYSYVGCFADNKHDRVFEYMRTS
FTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSDGVCDHAC
GGDEADYCGGFDAFDLYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQ
PDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAG
CSGDPAVACGGFNAFNLFKFGGTR*

spliced messenger RNA

>Ec-00_001920.1 ID=Ec-00_001920.1|Name=Ec-00_001920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1725bp|location=Sequence derived from alignment at chr_00:2151906..2158011+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGACTCCAGCTCCGTTTGCATCGGGGATGGTGGGGGCGGTGGCAGTGTT
TGGCATGCTGGCACCAGCTGCCGTGGACGGACATGGCTTCGTCATCGAGC
CAATCAGCCGGCAATACCTGCGATCACAAGAATTTAATGACGGCTACGTG
CACTCCGTAGAGAGGTGGGCGGGATCCTTCAACGGAGGAGGTGCTGACGC
GGTCCAGGCCCGAACAATCGACAACATCGATCCTGACATCCTTGCCGACT
ACGGTGGCGGCGACGTCTGGATCGTGGGGGCGGCTTGGGACAAGGGGGAG
AGGTGCCCGAACAACAACTACCTCGAGAGCGACAAGATTGCCGTCGGACA
CGGCGTGTGCGGGGACCCTCCCCAGGGCGGCTTGGACAACCCGAACACGT
ACAGCACTTCGAACACCCTCTGGCGTCCGATCTCGACGTACACGTCGGGA
TCTATCATCGAGCTCAAGGCCGTCATCAACAACAACCACTGGGGGCACAT
CGAGTACTTCCTCTGCGACACCGCTGACATGGACGACCCTGACGACGTGG
TTACCCAGGACTGCTTGAACATGTACCCGCTCGACCGTGACGAGACCGAT
GGGTGGAACAGCCCTATCGACCCGGACTACCCCGGGCGTTTCTTCGTGAA
CCCCGAGTGCCGCGGTCAAAATGAAGAGACCGACCAATCAGGCAGGCCCG
TGCTCAGCGGTGGCGATAGTGGCCTGGACAACGGCTACATCAACGTTGGA
CGTTACCATCTGCCGAACATCCAGTGCGACCACTGCGTCCTCCAGATGAA
ATACTACGCGTACGTCGGGTGCCACCACCCCGGCTACCACGAATTCGAGC
CCGAGTGGCCGGGAGAGTGCGCGCCGGACAAGGAGGATTGGCTGCCGCAC
AAGAACCCCGGTTGCAGCGACGAAGGCCAGAAGTGGGGCAACGTGTTCTT
CGGCTGCTCCGACATCACTCTGGTGGCCGACGGCGAAATGCCCACGGTTC
CCGAGCCAACGCCGGAGCCGACGCCCGAGCCAACTCCCGAACCGACGCCT
GAGCCTGAGCCCACTGCAGAGCCCGAGCAAACAGTTGCTGCTCCTGTGTA
CGAAATGCCCGTAACCTTGCCGGTCGAGGCAAGTTACTCGTACGTCGGCT
GCTTTGCGGACAACAAGCACGACCGAGTGTTCGAGTACATGAGGACTTCG
TTCACCATGACCACCGCGGTGTGCCTCGAGTACTGCTTGGAGAGGCGAGC
CACCTACATGGCTACCCAGTACGGAATCGAGTGCTGGTGCAGCGTCGACG
CAGAGACCGAGTACGACCGCCACTCCGATGGCGTGTGCGATCACGCGTGC
GGCGGGGATGAGGCGGACTATTGCGGTGGCTTCGACGCTTTCGACCTCTA
CAAGATCACGGAACCGAGGGAACCCACGGGCGACGAGTACGTGGGGTGCT
TCGCCGACAACCCGGAAGACTGGGTGTTGGGCGGCGAGATCAAGTCGCAG
CCCGACATGACCCAGGCCGTCTGCCGCACGTACTGTGAGGACCTCGACGC
CAACTTCTACGCGACACAGAACGGCGAAGAGTGCTGGTGCGGAATGTCCG
AGGAAGAGGAGGACTACACGAGGAGCGGGCGGGGATCATGTCTCGCGGGC
TGCTCCGGTGACCCTGCGGTCGCGTGCGGTGGGTTCAACGCGTTCAACTT
GTTCAAGTTCGGCGGAACCCGTTAG

protein sequence of Ec-00_001920.1

>Ec-00_001920.1 ID=Ec-00_001920.1|Name=Ec-00_001920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=575bp
MTPAPFASGMVGAVAVFGMLAPAAVDGHGFVIEPISRQYLRSQEFNDGYV
HSVERWAGSFNGGGADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGE
RCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSG
SIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETD
GWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVG
RYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPH
KNPGCSDEGQKWGNVFFGCSDITLVADGEMPTVPEPTPEPTPEPTPEPTP
EPEPTAEPEQTVAAPVYEMPVTLPVEASYSYVGCFADNKHDRVFEYMRTS
FTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSDGVCDHAC
GGDEADYCGGFDAFDLYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQ
PDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAG
CSGDPAVACGGFNAFNLFKFGGTR*

mRNA from alignment at chr_00:2151906..2158011+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_001920.1 ID=Ec-00_001920.1|Name=Ec-00_001920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=6106bp|location=Sequence derived from alignment at chr_00:2151906..2158011+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACTCCAGCTCCGTTTGCATCGGGGATGGTGGGGGCGGTGGCAGTGTT
TGGCATGCTGGCACCAGCTGCCGTGGACGGACATGGCTTCGTCATCGAGC
CAATCAGCCGGCAATACCTGCGATCACAAGAATTTAATGACGGGTGAGGG
GCACGCAACCATAATGACCCATGCATGCGCTGCAGTTGTTGATGTTGTTC
TAGTCGAGGAGCGACTGCAGGAGTTTCGTATACGCATCATGAGCCTAGTC
TAGCCTGTAGAGAGGCTTGCTTGCTTTTTGCCTGGACCAGGGTGTGTGCG
ATAGTTTTGGGGACGTTGTTTCACAGCTTCTTCGATATTGTCATGCGGGT
GGGTGTAGAAATTTCATCTACAGCAGTGCAATGACAGTCGTTGCAGCCGT
GCAGATCTCGGACGCTCGTCTCTGACTACGCGCTCGAAAACTGAGTTACT
GCTGTTGATTACATGTGGGGCAGCAGCAGCGGCAGTAACATTTTCGAGAG
GGAGTGTTTTTTTCGAAATCCCCTGCTGCTGTTGAACGGCGGTGTTGTTG
TCGGAGTCAGAACAAAGATGAAGTACTCACGATTCTCTCCTTCGTGTTTT
ACTCCTCCTCCCCCACCCCGCCCACGAAACGCGCAGCTACGTGCACTCCG
TAGAGAGGTGGGCGGGATCCTTCAACGGAGGAGGTATGTGGAGTATCCTT
TTATGCATACTTGGAATGATCGCGATAAGTTACCCACTGTTACATAATAT
ACGCTCTGCTTTCAGATCAAATTTTGGTGTTTTATTTCGACGGTCCGGCA
ACAAGCCGTCTCCAGCCTGGCACTTCTCGTTCTGTGATGGTCGGCGGTCG
GCGGACCTGTTCCGAATCGTTGTTTTTTTCTGGAGCGAATAAAGACTACG
CATGCATATGTTTCAATGCTACAGCGGTTTTCGAGTCGAAGGAAAGGACA
ACGATTATTGTGTAGGGGGCTGTATGTAGCGTTGTTTGTCTCTTTTTGAA
TGTTCGTGCCAAAAAAATGGTGTAAACTCCAGTGGGTACAGTAGTACAAA
CTGAAGACATTTGCAACGGTTGACTCTACTTGTACGTAGTTTGGGAAGAG
CTGATGCCGGCAAGATGGATATATTCTTCATTTACCTTGTGAGTATATTT
CCAATGACGCTACATACACCGGCTCTTGAAGCGGACGCCTGCTCGATAAA
CACGTTCGGTACAGAGAGATATCCGGTACACGACATGAACCAACGTTGCT
TATCGCCCACGTTGACGACTCTCGAAGCCCGTATCCATACATCGCCGACC
ATGGGTCGCCGCTTTAGCGTCCACTATCCCCCCCCGGCATGGAAGGTCCA
CACGTTCACACTCGCAGCGTCGTTGCCGCATCCTTGCGCTGAATCGTAGG
TGCTGACGCGGTCCAGGCCCGAACAATCGACAACATCGATCCTGACATCC
TTGCCGACTACGGTGGCGGCGACGTCTGGATCGTGGGGGCGGCTTGGGAC
AAGGGGGAGAGGTGCCCGAACAACAACTACCTCGAGAGCGACAAGATTGC
CGTCGGACACGGCGTGTGCGGGGACCCTCCCCAGGTCAGTGACGCGATCG
CTTCCTAGCGAGAGACACGGTGAATGCACCAAGATTGGCGACCTGTTTAC
GACAGTTTATCGCAGAGTGCCTTCGCGCAACCTTGCGACGGCGTTTTGAA
CAAGTCGGGTAAGGACAACGCCGATTGTTTATCTACCAGTACGAGCGTCT
TCGATATGTCGCCCACTCGCCGGGTTTCCTCGAAAGGCGATCAGCACCTT
CTCCCTCAATTCTCAAATCGGCCACTCACAATGGTCGTGTTCAAAAACGT
TACCCAAATAACTCCTAACGAAACCCATGCTTACGTATGAAAAATACAGG
GCGGCTTGGACAACCCGAACACGTACAGCACTTCGAACACCCTCTGGCGT
CCGATCTCGACGTACACGTCGGGATCTATCATCGAGCTCAAGGCCGTCAT
CAACAACAACCACTGGGTGAGTCTACGTTACGCGATACTATGCACGCCTT
CAAGCAATTCATCTTTGTGCATCACCCTCCACACACACACCGCTGGAAAC
AAGAAAAGCCGTGATGTGACGAGTCAAGCCCCTACTCTGGTGTGGCTTTT
GTTTGCTTCACAGATGAGGCACGAACATCGTTTCTGGAAACAGCGGAGTT
TAAGATGTCGCACAAGCAGGATCGTGAGAAACTCATTCTTGTACCCGGGC
GGTGCGAAAAGTGTCTGAGGCGAGGCTACTAATTCAGGAGTTCTGCGCTT
CTGTAATTGCAGCCTGTACACGTTGAAATCAGCCAAAAGACGATTCCCAG
CTTTTGGCAAAAGCATCATCGGCGTGAGCTTGAACGAGCTTCACGTTTTG
TAAATCACACCCCGTGATTCCCGCCCGTCCCTTCCTTCCCGGAACCAACA
GGGGCACATCGAGTACTTCCTCTGCGACACCGCTGACATGGGTGAGTCTC
GTGCATCAGTCCTTTTCCGGGTGGTACTTGCCCGCGTTTTTCTGATGCTA
GTCTCCTTGGCCTGCGCGCATCATTGCCGTGCGAATATTTTTTTGTCCGC
GGGAAATAGCATAGGCCATATGAACATCAAGTACATGCCAAACGTATGGC
AGCACTCTCATTACTGAGCCCCCACCCCAACCTTCTTCCCCATCGGAAAT
CAGACGACCCTGACGACGTGGTTACCCAGGACTGCTTGAACATGTACCCG
CTCGACCGTGACGAGACCGATGGGTGGAACAGCCCTATCGACCCGGACTA
CCCCGGGCGTTTCTTCGTGAACCCCGAGTGCCGCGGTCAAAATGAAGAGA
CCGACCAATCAGGCAGGCCCGTGCTCAGCGGTGGCGATAGTGGCCTGGAC
AACGTGAGCAATCTGTCCAACTTGGTAGATGTCTTGGGTAGGCGATGCTT
GTAAAGGGCTCGCATATCCAGAGCACGCCTAGCAGCATCATTGCTGCGAG
CGTAGTTGTACTCCAATCAGTATCAAAAACGCCGTTTCGTTGTTCGAGGG
GAGGGGGGCCTGGAGAATAACGCTTTCGGATCGACGGGTGGTGTATTTGA
GAAGTGGCTATCAAATAACGATAGGTTTTGCTCTTGACAGAGCGAGCTGC
CGACGTCCATATTTATGTTGGGCTTGGTAAAGGCGTGCGGCGTGAAATGC
TTGTCACGCCGCGTTGTGCTAACCTGTGCTTCCCCAGGGAAACACCTATC
GGGGGCCGAGGCCAATATTAACTCACCCCCCCATGCCCAACTTCTTGCCT
TTTGCAGGGCTACATCAACGTTGGACGTTACCATCTGCCGAACATCCAGT
GCGACCACTGCGTCCTCCAGATGAAATACTGTGAGTACGTACGTGTCCTG
GCTCTCAACGATACCACCATTTTTGTGTAGTTTCTGGAACCAGTGTCAAA
AATTTCCGCGTATTTCTTCACCCGCATAACCCTTTTCCCCAGCAAACATT
GTGCTTGGCGTCACCAGTGCAGCCCCTTGATGACTGTAAGGACTGGAGCT
CACCGCACAAGAGACCTACCTCTACGGCACCCCTCGTAGGAAGTTGCAGA
GCAGTTCGTAGGTTCTCTGGATCATCAAGGATCATATGTTTAACAATGTC
CCATCCATCCTTCTACCTTTGGCAGACGCGTACGTCGGGTGCCACCACCC
CGGCTACCACGAATTCGAGCCCGAGTGGCCGGGAGAGTGCGCGCCGGACA
AGGAGGATTGGCTGCCGCACAAGAACCCCGGTTGCAGCGACGAAGGCCAG
AAGTGGGGCAACGTGTTCTTCGGCTGCTCCGACATCACTCTGGTGGCCGA
CGGTGAGATTGATTATCCCTAGGCAACCCGTATTCTACACGCAGTTGTCA
TATGGATACAATCCTCTTTCTACTCCTTGCACCAACAACCTTTGAGTAAG
CCGCAGTGTCCCCTTTTTTCTCACAGGCTATTTGGGTGTTTCCGCATGCA
ATAGTGGGACTTGCTTTGCTTGCAACGCTCTGCGGGTAGGTCGAGCTACT
GTACAACAATATTGAATAAGGCGTTTGGGTTCCCCCCCATTTCTTCCGGT
AGAAACGTGCACATGCCTCTAACCCTAACAATAACCCTTTACAGGCGAAA
TGCCCACGGTTCCCGAGCCAACGCCGGAGCCGACGCCCGAGCCAACTCCC
GAACCGACGCCTGAGCCTGAGCCCACTGCAGAGCCCGAGCAAACAGTTGC
TGCTCCTGTGTACGAAATGCCCGTAACCTTGCCGGTCGAGGCAAGTTACT
CGTACGTCGGCTGCTTTGCGGACAACAAGCACGACCGAGTGTTCGAGTAC
ATGAGGACTTCGTTCACCATGACCACCGCGGTAAGTTTACGCGCTCGTTT
GTCTTTGAATGCGCTTTGTCGTGACTCTTCCGCCAGTATTTCTTCTCCCA
CCCGAGCTCGCTCTTTTGTGTAGATTTTGATGTCCCGCTTCCCATAGCCC
TTGGTAATCGCGATCGGTACAGCTGTAGTAGTCAGACTTTTGGTGTACAG
AACTAAGAGGCATGCGTGTCTGTAGGCGTTTTTACCCCATCTCGGGTGTT
GAAAATATTCGCTTTGGACCCGGCTAGTGACTGATAGTTGGTTTCCATTT
TCCCTACCCAGGTGTGCCTCGAGTACTGCTTGGAGAGGCGAGCCACCTAC
ATGGCTACCCAGTACGGAATCGAGTGCTGGTGCAGCGTCGACGCAGAGAC
CGAGTACGACCGCCACTCCGATGGCGTGTGCGATCACGCGTGCGGCGGGG
ATGAGGCGGACTATTGCGGTGGCTTCGACGCTTTCGGTGAGTGTTCGTTT
CCGTTTCTGATTTCGTCTCACGTATGGGGGCGACCGCTCTCGCCGCTTGA
AACGTTCCCGGATGTCTCGGAAATGGTGGTTTGGCTTCACGAACACGCGT
GAAGGCGGTTGTCGAGAGAAGGCAGACGCGGTTTGATGTCGTCGGTCATG
GCTGTGGTTTTCTTAGAAAAGCGTTATCTTGGTGGTGCGGTAGCTGTCAT
TTCGCCGTCCATATGCAGCACGTATGACGCACGCACGCATCGTGGGCGTG
TCGCCTTTACGCACGATCTTCACCCCCGCGCCGCCTGATTCCTGCGCCGT
GGTATCCAGACCTCTACAAGATCACGGAACCGAGGGAACCCACGGGCGAC
GAGTACGTGGGGTGCTTCGCCGACAACCCGGAAGACTGGGTGTTGGGCGG
CGAGATCAAGTCGCAGCCCGACATGACCCAGGCCGTCTGCCGCACGTACT
GTGAGGACCTCGACGCCAACTTCTACGCGACACAGGTGAATGGTGGTGGG
GATTGCATTGTTGAAGAGCACTGTAGGCGAGATGATTGATGGCAGGCCGC
CGCACGAACCCAAAGGGCAGCCTCCCGCGCTCGACGAAAGCGCTACTGCT
GCCGGCTTTCTCCCCTGTTTTGGTATGCTACAGCAGTGGTGGTGCTCTTT
GAGCTCGGGTTTCTTTCCTTTGTTCTGTTCGCTGTGTGCCCGATGGCTCA
CCCCCCTCTGCCCTTCAACATGTGGCTAACCAGTGGTTTCCTTCGTTGTA
TTCGATCCCCGCCTCTGGCGCTTGTTCGTCTCCTGGCTCAACAGAACGGC
GAAGAGTGCTGGTGCGGAATGTCCGAGGAAGAGGAGGACTACACGAGGAG
CGGGCGGGGATCATGTCTCGCGGGCTGCTCCGGTGACCCTGCGGTCGCGT
GCGGTGAGTGAGATTGAGAGCGGGGTTTAGGAAACCAACGAGATTGTTGG
AAGACCAGCACGGCAATATGGCAATGAATCTATAGAAACATAAAAGAGAG
TTCGAAATCGAGAGGTACACGAAGAGGCCAACAGCTTGACGCTCGGGTTG
GAGCCCATCAGGTGATCTCTCCACCTTGGGCCGGATATGATGGCATGACA
GGAACTCATTTTTTTGTGACGAATGAGAGCCTTGTGGATATGACTGCCCC
ATCTTCTTAACTCGTGTCCTTCCATCCCCCCCCCCCTCGCTGTCGCCCGT
TTGTCCCAGGTGGGTTCAACGCGTTCAACTTGTTCAAGTTCGGCGGAACC
CGTTAG

Coding sequence (CDS) from alignment at chr_00:2151906..2158011+

>Ec-00_001920.1 ID=Ec-00_001920.1|Name=Ec-00_001920.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1725bp|location=Sequence derived from alignment at chr_00:2151906..2158011+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGACTCCAGCTCCGTTTGCATCGGGGATGGTGGGGGCGGTGGCAGTGTT
TGGCATGCTGGCACCAGCTGCCGTGGACGGACATGGCTTCGTCATCGAGC
CAATCAGCCGGCAATACCTGCGATCACAAGAATTTAATGACGGCTACGTG
CACTCCGTAGAGAGGTGGGCGGGATCCTTCAACGGAGGAGGTGCTGACGC
GGTCCAGGCCCGAACAATCGACAACATCGATCCTGACATCCTTGCCGACT
ACGGTGGCGGCGACGTCTGGATCGTGGGGGCGGCTTGGGACAAGGGGGAG
AGGTGCCCGAACAACAACTACCTCGAGAGCGACAAGATTGCCGTCGGACA
CGGCGTGTGCGGGGACCCTCCCCAGGGCGGCTTGGACAACCCGAACACGT
ACAGCACTTCGAACACCCTCTGGCGTCCGATCTCGACGTACACGTCGGGA
TCTATCATCGAGCTCAAGGCCGTCATCAACAACAACCACTGGGGGCACAT
CGAGTACTTCCTCTGCGACACCGCTGACATGGACGACCCTGACGACGTGG
TTACCCAGGACTGCTTGAACATGTACCCGCTCGACCGTGACGAGACCGAT
GGGTGGAACAGCCCTATCGACCCGGACTACCCCGGGCGTTTCTTCGTGAA
CCCCGAGTGCCGCGGTCAAAATGAAGAGACCGACCAATCAGGCAGGCCCG
TGCTCAGCGGTGGCGATAGTGGCCTGGACAACGGCTACATCAACGTTGGA
CGTTACCATCTGCCGAACATCCAGTGCGACCACTGCGTCCTCCAGATGAA
ATACTACGCGTACGTCGGGTGCCACCACCCCGGCTACCACGAATTCGAGC
CCGAGTGGCCGGGAGAGTGCGCGCCGGACAAGGAGGATTGGCTGCCGCAC
AAGAACCCCGGTTGCAGCGACGAAGGCCAGAAGTGGGGCAACGTGTTCTT
CGGCTGCTCCGACATCACTCTGGTGGCCGACGGCGAAATGCCCACGGTTC
CCGAGCCAACGCCGGAGCCGACGCCCGAGCCAACTCCCGAACCGACGCCT
GAGCCTGAGCCCACTGCAGAGCCCGAGCAAACAGTTGCTGCTCCTGTGTA
CGAAATGCCCGTAACCTTGCCGGTCGAGGCAAGTTACTCGTACGTCGGCT
GCTTTGCGGACAACAAGCACGACCGAGTGTTCGAGTACATGAGGACTTCG
TTCACCATGACCACCGCGGTGTGCCTCGAGTACTGCTTGGAGAGGCGAGC
CACCTACATGGCTACCCAGTACGGAATCGAGTGCTGGTGCAGCGTCGACG
CAGAGACCGAGTACGACCGCCACTCCGATGGCGTGTGCGATCACGCGTGC
GGCGGGGATGAGGCGGACTATTGCGGTGGCTTCGACGCTTTCGACCTCTA
CAAGATCACGGAACCGAGGGAACCCACGGGCGACGAGTACGTGGGGTGCT
TCGCCGACAACCCGGAAGACTGGGTGTTGGGCGGCGAGATCAAGTCGCAG
CCCGACATGACCCAGGCCGTCTGCCGCACGTACTGTGAGGACCTCGACGC
CAACTTCTACGCGACACAGAACGGCGAAGAGTGCTGGTGCGGAATGTCCG
AGGAAGAGGAGGACTACACGAGGAGCGGGCGGGGATCATGTCTCGCGGGC
TGCTCCGGTGACCCTGCGGTCGCGTGCGGTGGGTTCAACGCGTTCAACTT
GTTCAAGTTCGGCGGAACCCGTTAG

Synonyms

The feature 'Ec-00_001920.1' has the following synonyms


Synonym
Esi0013_0185
Esi_0013_0185