Ec-00_001380.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_001380.1
Unique NameEc-00_001380.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length305
Homology
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BLAST of Ec-00_001380.1 vs. uniprot
Match: D8LE93_ECTSI (G-patch domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE93_ECTSI)

HSP 1 Score: 404 bits (1038), Expect = 9.730e-139
Identity = 303/304 (99.67%), Postives = 303/304 (99.67%), Query Frame = 2 
Query:   86 MSVQLLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLGKEKAQQNKVNDQWYFNAFDSALANMGGKKKKXXXXXXXDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQNGKLSRTEGGQDGTGGXXXXXXXXXXXXXXXGGEGQGSSSHKRKRSTGTEEVKTEESPKVVXXXXXXXXXXXXXXXXXXKGGGEAKKADSSTKAERKRERSXXXXXXXXXXXXXXXXXXXXRVPVAVKKEENGEEEGASGKEXXXXXXXXXXRAKKGA 997
            MSVQLLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLGKEKAQQNKVNDQWYFNAFDSALANMGGKKKKXXXXXXXDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQNGKLSRTEGGQDGTGGXXXXXXXXXXXXXXXGGEGQGSSSHKRKRSTGTEEVKTEESPKVVXXXXXXXXXXXXXXXXXXKGGGEAKKADSSTKAERKRERSXXXXXXXXXXXXXXXXXXXXRVPVAVKKEENGEEEGASGKE XXXXXXXXXRAKKGA
Sbjct:    1 MSVQLLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLGKEKAQQNKVNDQWYFNAFDSALANMGGKKKKXXXXXXXDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQNGKLSRTEGGQDGTGGXXXXXXXXXXXXXXXGGEGQGSSSHKRKRSTGTEEVKTEESPKVVXXXXXXXXXXXXXXXXXXKGGGEAKKADSSTKAERKRERSXXXXXXXXXXXXXXXXXXXXRVPVAVKKEENGEEEGASGKEKXXXXXXXXXRAKKGA 304
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BLAST of Ec-00_001380.1 vs. uniprot
Match: A0A835Z8F6_9STRA (G-patch domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8F6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.410e-33
Identity = 75/149 (50.34%), Postives = 100/149 (67.11%), Query Frame = 2 
Query:   98 LLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLGKEKAQQNKVNDQWYFNAFDSALANMGGKKKKXXXXXXXDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQNGKLSRT 544
            +LGKR LK L + AND AG+GYS F++ MM KMGW EGQGLGK+ QG ++Y++VK+K+D++GLG+EK ++ K  +QWYFNAF+ A+A       K            GE K +      T+Y +MF+ +GGARMGMRARASQ  K  RT
Sbjct:    4 VLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREKAANQWYFNAFEDAIAAAHALDPKLRKKLKNK----GEKKRKREVNEATIYQEMFEKSGGARMGMRARASQKAKWERT 148
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BLAST of Ec-00_001380.1 vs. uniprot
Match: A0A7S2V0B5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0B5_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.120e-23
Identity = 74/166 (44.58%), Postives = 107/166 (64.46%), Query Frame = 2 
Query:   92 VQLLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLGKEKAQQNKVNDQWYFNAFDS-----ALANMGGKKKKXXXXXXXDKTADGEGK---------PEAAAEATTMYDKMFKATGGARMGMRARASQNGKLSRTE 547
            +Q++GK+++K +S+  ++ +G+  S FA+  M KMGW EG GLGK   GR+ +V+V K++++ GLG E+ ++  V+DQW+ NAF+S     A AN   KKK XXXXXXX                  P+AAA    ++ ++FKATGGARMGMRARA+Q+ K  RTE
Sbjct:    1 MQVVGKKQMKWMSTNLSEASGSAVSDFARRQMEKMGWKEGMGLGKNSDGRTEHVRVVKREESMGLGVEQKERESVSDQWWLNAFESVSNNLAKANTDNKKKXXXXXXXXXXXXXXXXXXXXXXXXXXPDAAA-GQEVWQELFKATGGARMGMRARATQSAKWERTE 165
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BLAST of Ec-00_001380.1 vs. uniprot
Match: A0A7R9YDY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDY2_9STRA)

HSP 1 Score: 101 bits (251), Expect = 9.600e-22
Identity = 64/156 (41.03%), Postives = 91/156 (58.33%), Query Frame = 2 
Query:   98 LLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLGKEKAQ-QNKVNDQWYFNAFDSALANMGGKKKKXXXXXXXDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQNGKLSRTEGGQDG 562
            L+ K  L+ L    N+   +G S FA+  + KMGW+EG+GLGK E G  ++V+VKK++DN+GLG E ++ Q  V   W+ +AF  A+  +GGK+                      A+     +++FKATGGAR+GMRARA QNGK +R E G DG
Sbjct:    4 LVSKDTLRGLRGKLNESVASGPSDFARRQLMKMGWSEGKGLGKREHGTVSHVRVKKREDNAGLGTETSRLQAIVAGDWWTDAFAGAVQKLGGKR----------------------AKREPTMEELFKATGGARLGMRARAKQNGKWARAERGLDG 137
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BLAST of Ec-00_001380.1 vs. uniprot
Match: A0A7S3M264_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M264_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.230e-20
Identity = 66/152 (43.42%), Postives = 91/152 (59.87%), Query Frame = 2 
Query:   98 LLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLGKEK--AQQNKVNDQWYFNAFDSALANMGGKKKKXXXXXXXDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQNGKLSRTE 547
            LL K+ + ++ S  N+ AG+  S FA   M KMGW EG+GLGK E G S ++ + K++++SGLG E   A+    ++ W+ +A+ S L  +  K  K     XX    DGE   +   +A   YD +FKATGGAR+GMRARA Q GKL RTE
Sbjct:    9 LLNKKTVMKMGSQMNENAGSKPSSFALKQMEKMGWTEGKGLGKTESGISKHITIVKREESSGLGSEAVDARAAAASENWWHDAYSSNLKLIKMKHGKKSKSSXXXXXLDGEXXEKN--DAPPSYDDLFKATGGARLGMRARADQKGKLKRTE 158
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BLAST of Ec-00_001380.1 vs. uniprot
Match: A0A196SBI7_BLAHN (G patch domain containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SBI7_BLAHN)

HSP 1 Score: 93.6 bits (231), Expect = 1.030e-18
Identity = 65/152 (42.76%), Postives = 91/152 (59.87%), Query Frame = 2 
Query:   92 VQLLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLGKEKAQQNKVNDQWYFNAFDSALANMGGKKKKXXXXXXXDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQNGKLSRTE 547
            +  LGKR++  L+S+ ND A    S + K +M KMGW++G+GLGK+  G    + +KKKD+  G+G ++ Q N+ ND W+FNA+DSA A   G+    XXXXXX       GK +   +A     ++F A  G R+GMRAR SQ GK  R E
Sbjct:    7 IHRLGKRQMDYLASMQNDVATEATSAYGKKLMQKMGWSDGEGLGKDGTGIKKSIVIKKKDNEEGVGFKEQQSNRWNDTWWFNAYDSA-AKKSGRSSTSXXXXXXXXXXSSNGKQKVYTDA-----ELFAACKGRRLGMRARKSQKGKWERCE 152
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BLAST of Ec-00_001380.1 vs. uniprot
Match: A0A1W0A5E1_9STRA (G-patch domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5E1_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.050e-17
Identity = 61/151 (40.40%), Postives = 95/151 (62.91%), Query Frame = 2 
Query:   89 SVQLLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLGKEKAQQNKVNDQWYFNAFDSALANMGGKKKKXXXXXXXDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQNGKLSR 541
            +V ++GK+ L +L  +AN+ A +  S FAK  MAKMGW EG+GLGK+EQG +T+++VK++++N+G+G E A+  + ++QW++N +D   + +  +   XXXXXXX             A+  T  +++F ATGG   G RA  S  GKL R
Sbjct:    5 TVPIVGKKFLAQLGGMANESAASEVSSFAKKQMAKMGWTEGKGLGKQEQGIATHIKVKRREENAGVGTEAAKTEEQSNQWWYNVYDKMASKIVVEASDXXXXXXXXXXXXXXXXSRDLADEPT-DEQLFAATGGRLFGRRAYGSCKGKLMR 154
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BLAST of Ec-00_001380.1 vs. uniprot
Match: A0A7S2DWI2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWI2_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.100e-17
Identity = 61/158 (38.61%), Postives = 90/158 (56.96%), Query Frame = 2 
Query:   86 MSVQLLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLG---KEKAQQNKVNDQWYFNAFDSALANMG-GKKKKXXXXXXXDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQNGKLSRTE 547
            M ++LL K  +  L    N+GA +  S FA   M KMGW +G GLGK+E G + +++++KKD   GLG   +E++ + K    W+ N F + L  +  G+KKK               +P  + E  + +D++F ATGGAR+GMRAR SQNGK+ R E
Sbjct:    1 MDLKLLSKSTVNLLGCKQNEGAASAVSDFALRQMEKMGWKKGMGLGKDENGIADHIRIEKKDGKDGLGMADQERSDEAKAAG-WWNNGFANTLDKIQIGEKKKSKKRK----------RPSNSTEVPS-FDELFAATGGARLGMRARRSQNGKIRRAE 146
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BLAST of Ec-00_001380.1 vs. uniprot
Match: A0A067CL68_SAPPC (G-patch domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CL68_SAPPC)

HSP 1 Score: 86.7 bits (213), Expect = 1.830e-16
Identity = 62/154 (40.26%), Postives = 97/154 (62.99%), Query Frame = 2 
Query:   86 MSVQLLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLGKEKAQQNKVNDQWYFNAFDSALANMG-GKKKKXXXXXXXDKTADGEGKPEAAAEATTMYDK-MFKATGGARMGMRARASQNGKLSR 541
            ++V ++GK+ L +L  +AN+ A +  S FAK  MAKMGW++G+GLGKEEQG +T+++VK++++N+G+G E A+  + ++QW++N ++   + +       XXXXXXX        K  + AE     D+ +F ATGG   G RA  S  GKL R
Sbjct:    4 VTVPIVGKKFLAQLGGMANESAASEVSSFAKKQMAKMGWSQGKGLGKEEQGIATHIKVKRREENTGVGTEAAKTEEQSNQWWYNVYNKMASKIVVDAXXXXXXXXXXXXXXXXXXKKRSRAEMDVPTDEQLFAATGGKLFGRRAYGSCKGKLMR 157
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BLAST of Ec-00_001380.1 vs. uniprot
Match: D8MAK2_BLAHO (G-patch domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8MAK2_BLAHO)

HSP 1 Score: 83.6 bits (205), Expect = 6.090e-16
Identity = 61/144 (42.36%), Postives = 88/144 (61.11%), Query Frame = 2 
Query:   92 VQLLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLGKEKAQQNKVNDQWYFNAFDSALANMGGKKKKXXXXXXXDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQ 523
            +Q LG++ ++ LSS+ N  A +G S + K ++  MGWA+G+GLGKE  G    + VKKKDD  G+G ++ Q NK  + W+FNA+DSA+  +G     XXXXXXX         P+  ++A     ++F A  G R+GMRAR SQ
Sbjct:    7 IQRLGRKHMEMLSSMQNISASSGTSVYGKKILKMMGWADGEGLGKEGTGIKESIIVKKKDDEEGVGYKEEQSNKWGECWWFNAYDSAVKKIGSSSTXXXXXXXXXXXXS---TPKVYSDA-----ELFAACKGRRLGMRARRSQ 142
The following BLAST results are available for this feature:
BLAST of Ec-00_001380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE93_ECTSI9.730e-13999.67G-patch domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835Z8F6_9STRA1.410e-3350.34G-patch domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2V0B5_9STRA1.120e-2344.58Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7R9YDY2_9STRA9.600e-2241.03Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3M264_9STRA1.230e-2043.42Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A196SBI7_BLAHN1.030e-1842.76G patch domain containing protein n=1 Tax=Blastocy... [more]
A0A1W0A5E1_9STRA2.050e-1740.40G-patch domain-containing protein n=1 Tax=Thrausto... [more]
A0A7S2DWI2_9STRA2.100e-1738.61Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A067CL68_SAPPC1.830e-1640.26G-patch domain-containing protein n=3 Tax=Saproleg... [more]
D8MAK2_BLAHO6.090e-1642.36G-patch domain-containing protein n=1 Tax=Blastocy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:1607464..1609624 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score414.5
Seed ortholog evalue4.4e-113
Seed eggNOG ortholog2880.D8LE93
Length1001
KEGG koko:K11135
Hectar predicted targeting categoryother localisation
Gene idEc-00_001380.1
EggNOG free text desc.G-patch domain
EggNOG OGs2BNPX@1,2S1Q2@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009,ko03032
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_001380Ec-00_001380Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 1607464..1610509 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001380.1.1Ec-00_001380.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1607464..1607623 +
Ec-00_001380.1.2Ec-00_001380.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1608207..1608464 +
Ec-00_001380.1.3Ec-00_001380.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 1609042..1609624 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_0013805UTR:Ec-00_001380.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_00 1607464..1607549 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001380.1CDS:Ec-00_001380.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 1607550..1607623 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_001380.1Ec-00_001380.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 1607550..1609624 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_001380.1 ID=Ec-00_001380.1|Name=Ec-00_001380.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=305bp
MSVQLLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQ
GRSTYVQVKKKDDNSGLGKEKAQQNKVNDQWYFNAFDSALANMGGKKKKK
KDKKRRDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQNGKL
SRTEGGQDGTGGGTPSTAPNGSINGAIGGEGQGSSSHKRKRSTGTEEVKT
EESPKVVVKREKTTTTGQETTAVAVKGGGEAKKADSSTKAERKRERSEAK
KAKRAAKTAQKEEAKEARVPVAVKKEENGEEEGASGKEKEKPRKKKQKRA
KKGA*
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spliced messenger RNA

>Ec-00_001380.1 ID=Ec-00_001380.1|Name=Ec-00_001380.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1001bp|location=Sequence derived from alignment at chr_00:1607464..1609624+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TGCCGTGGCAGCAGGTGCAAGTAGTTACCTGTTACTCTCGGCTTGCCTCA
CCATCTCGTGGGTCACCCAATCGTTGTGCGTGGACGATGTCGGTGCAGCT
GCTCGGAAAGCGGGAGCTAAAGAGACTTTCTTCTGTGGCGAACGATGGCG
CTGGCGCGGGGTACTCAGGCTTTGCCAAAGGGATGATGGCAAAAATGGGC
TGGGCCGAGGGCCAGGGGCTGGGTAAGGAAGAGCAGGGCAGGTCTACGTA
CGTCCAGGTGAAGAAGAAGGACGACAACTCTGGCTTGGGCAAGGAAAAGG
CGCAACAGAACAAAGTCAATGACCAGTGGTACTTCAACGCCTTTGACTCC
GCTTTGGCGAACATGGGAGGCAAGAAGAAGAAGAAAAAGGACAAGAAGAG
GAGAGACAAGACGGCTGATGGTGAGGGCAAGCCGGAAGCGGCAGCAGAGG
CCACGACCATGTACGATAAGATGTTCAAGGCAACAGGCGGGGCGCGCATG
GGAATGCGAGCAAGGGCCTCTCAGAACGGCAAGCTCTCGCGCACCGAGGG
CGGCCAAGATGGCACTGGTGGTGGGACGCCTTCGACCGCGCCCAACGGCT
CTATCAACGGCGCAATAGGCGGGGAGGGGCAAGGGTCTTCAAGCCACAAG
CGAAAACGATCAACCGGTACCGAGGAGGTGAAGACAGAGGAGTCACCGAA
GGTGGTTGTGAAGCGAGAGAAGACGACAACAACGGGCCAGGAGACAACGG
CAGTAGCGGTCAAGGGGGGCGGTGAAGCGAAAAAGGCTGACAGCAGCACG
AAGGCCGAACGGAAACGTGAGAGGTCGGAGGCCAAGAAGGCCAAGCGAGC
AGCCAAGACGGCGCAGAAGGAGGAAGCGAAGGAAGCGAGAGTACCAGTCG
CGGTGAAGAAGGAGGAAAACGGCGAGGAAGAGGGGGCATCAGGGAAGGAG
AAGGAGAAGCCCCGCAAGAAAAAGCAGAAGCGAGCTAAGAAGGGCGCATA
G
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protein sequence of Ec-00_001380.1

>Ec-00_001380.1 ID=Ec-00_001380.1|Name=Ec-00_001380.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=305bp
MSVQLLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQ
GRSTYVQVKKKDDNSGLGKEKAQQNKVNDQWYFNAFDSALANMGGKKKKK
KDKKRRDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQNGKL
SRTEGGQDGTGGGTPSTAPNGSINGAIGGEGQGSSSHKRKRSTGTEEVKT
EESPKVVVKREKTTTTGQETTAVAVKGGGEAKKADSSTKAERKRERSEAK
KAKRAAKTAQKEEAKEARVPVAVKKEENGEEEGASGKEKEKPRKKKQKRA
KKGA*
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mRNA from alignment at chr_00:1607464..1609624+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_001380.1 ID=Ec-00_001380.1|Name=Ec-00_001380.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2161bp|location=Sequence derived from alignment at chr_00:1607464..1609624+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TGCCGTGGCAGCAGGTGCAAGTAGTTACCTGTTACTCTCGGCTTGCCTCA
CCATCTCGTGGGTCACCCAATCGTTGTGCGTGGACGATGTCGGTGCAGCT
GCTCGGAAAGCGGGAGCTAAAGAGACTTTCTTCTGTGGCGAACGATGGCG
CTGGCGCGGGGTAAGAGGCCATGAAGTTTCAAACCGCACACCAGCAGCAC
TCTACCTCCTCCAAACCTTGAAACCTTGTCACCATGTCCCTCTTAAAGCC
GCGCAAGACAGTAACTATTGTGTCGTAGCCTGGTGCACTGCACTGGCACG
TCATAGTGGAAGGATTGTCGTGCCCTGATACATACTTTCTAATCAACATT
GCCTGCTTCATGAAAGAAACCTAAACCTCTGTCCGCTGCTCGTCTCCAGT
CATCGAGTTGTGCCGATCGAATCCGCCTACCTCGCTTTGCTGCACATGGC
CGGTAGCACAAATCTTAGCTGGACACATCACGCGCGATTATAGGCCTACA
CTATGCAGACAGCGAACATGTTGCGCGATACGAAAATGGCGGCTGCGATG
TCTTGTGTGATGGTCCTCGGTATTACCCCGATACGTACGCATACATCCCG
AATTTGAATGCAGCCACCACCTGTTACTTGCAAGTTGGTAGATGATCAAC
CGAGTCCTTGTACGTAGGCGCCTTTGTAACTACACTTCTACGTGTTCAAC
TACTATAACTGTTTTGTGGTATCCCACACTCGCTTCTGTACAGGTACTCA
GGCTTTGCCAAAGGGATGATGGCAAAAATGGGCTGGGCCGAGGGCCAGGG
GCTGGGTAAGGAAGAGCAGGGCAGGTCTACGTACGTCCAGGTGAAGAAGA
AGGACGACAACTCTGGCTTGGGCAAGGAAAAGGCGCAACAGAACAAAGTC
AATGACCAGTGGTACTTCAACGCCTTTGACTCCGCTTTGGCGAACATGGG
AGGCAAGAAGAAGAAGAAAAAGGACAAGAAGAGGAGAGACAAGACGGCTG
AGTGAGTGCTTGCCCCTAACAGCTTACCATGGCATGCATAGTACCCGTTA
CCAGTGTCACGAAGATGGTGTGCTGTAGCAACTCCTGCCGCATGTTCTAT
GCTTGCCACACCTGAAGAGGCTTCGTGTTTCGGTTGTGAGGCCCAATTGA
GCCAATCTCCGTGCAAGGTGCCGCAAAGCGGATGACTTCTTGTGTAGCTC
ACGATTTGCGCCATGTGGCCACAACACACAGCAAGCAACAGGATGCCTGT
CTTGCATACCCTTCTCCAGGAGTATCGCTGTTTTGATGTCTACGTCTTGC
TCACTCGCCGTCCACTTATTTTTCGTATGTACGGCAATCCTGCAACCTCG
TGCCGGTGTGAGTAGAGAGTCTGTGCGACCACTTGCTGCTTCTGCGCGCA
GGGTTCTGCTTTTCTCATCTGGCCTCAATCCTGCCCTTGTCGGCCGTAAT
GCCTGTGATCAAAAGTACACTGGGCGTCCTATGTACAAACCTGCTACTGC
TGTAACTCCTAATCTAGTTTTCCGGCTGCTTTGCTCTGGCCTACTCGTTA
TTTGTTATATTTTTTTAACACGACACAGTGGTGAGGGCAAGCCGGAAGCG
GCAGCAGAGGCCACGACCATGTACGATAAGATGTTCAAGGCAACAGGCGG
GGCGCGCATGGGAATGCGAGCAAGGGCCTCTCAGAACGGCAAGCTCTCGC
GCACCGAGGGCGGCCAAGATGGCACTGGTGGTGGGACGCCTTCGACCGCG
CCCAACGGCTCTATCAACGGCGCAATAGGCGGGGAGGGGCAAGGGTCTTC
AAGCCACAAGCGAAAACGATCAACCGGTACCGAGGAGGTGAAGACAGAGG
AGTCACCGAAGGTGGTTGTGAAGCGAGAGAAGACGACAACAACGGGCCAG
GAGACAACGGCAGTAGCGGTCAAGGGGGGCGGTGAAGCGAAAAAGGCTGA
CAGCAGCACGAAGGCCGAACGGAAACGTGAGAGGTCGGAGGCCAAGAAGG
CCAAGCGAGCAGCCAAGACGGCGCAGAAGGAGGAAGCGAAGGAAGCGAGA
GTACCAGTCGCGGTGAAGAAGGAGGAAAACGGCGAGGAAGAGGGGGCATC
AGGGAAGGAGAAGGAGAAGCCCCGCAAGAAAAAGCAGAAGCGAGCTAAGA
AGGGCGCATAG
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Coding sequence (CDS) from alignment at chr_00:1607464..1609624+

>Ec-00_001380.1 ID=Ec-00_001380.1|Name=Ec-00_001380.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=915bp|location=Sequence derived from alignment at chr_00:1607464..1609624+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGTCGGTGCAGCTGCTCGGAAAGCGGGAGCTAAAGAGACTTTCTTCTGT
GGCGAACGATGGCGCTGGCGCGGGGTACTCAGGCTTTGCCAAAGGGATGA
TGGCAAAAATGGGCTGGGCCGAGGGCCAGGGGCTGGGTAAGGAAGAGCAG
GGCAGGTCTACGTACGTCCAGGTGAAGAAGAAGGACGACAACTCTGGCTT
GGGCAAGGAAAAGGCGCAACAGAACAAAGTCAATGACCAGTGGTACTTCA
ACGCCTTTGACTCCGCTTTGGCGAACATGGGAGGCAAGAAGAAGAAGAAA
AAGGACAAGAAGAGGAGAGACAAGACGGCTGATGGTGAGGGCAAGCCGGA
AGCGGCAGCAGAGGCCACGACCATGTACGATAAGATGTTCAAGGCAACAG
GCGGGGCGCGCATGGGAATGCGAGCAAGGGCCTCTCAGAACGGCAAGCTC
TCGCGCACCGAGGGCGGCCAAGATGGCACTGGTGGTGGGACGCCTTCGAC
CGCGCCCAACGGCTCTATCAACGGCGCAATAGGCGGGGAGGGGCAAGGGT
CTTCAAGCCACAAGCGAAAACGATCAACCGGTACCGAGGAGGTGAAGACA
GAGGAGTCACCGAAGGTGGTTGTGAAGCGAGAGAAGACGACAACAACGGG
CCAGGAGACAACGGCAGTAGCGGTCAAGGGGGGCGGTGAAGCGAAAAAGG
CTGACAGCAGCACGAAGGCCGAACGGAAACGTGAGAGGTCGGAGGCCAAG
AAGGCCAAGCGAGCAGCCAAGACGGCGCAGAAGGAGGAAGCGAAGGAAGC
GAGAGTACCAGTCGCGGTGAAGAAGGAGGAAAACGGCGAGGAAGAGGGGG
CATCAGGGAAGGAGAAGGAGAAGCCCCGCAAGAAAAAGCAGAAGCGAGCT
AAGAAGGGCGCATAG
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Synonyms
The feature 'Ec-00_001380.1' has the following synonyms
Synonym
Esi0013_0091
Esi_0013_0091