Ec-sdr_f_000110.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-sdr_f_000110.1
Unique NameEc-sdr_f_000110.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length371
Homology
BLAST of Ec-sdr_f_000110.1 vs. uniprot
Match: D7FV03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV03_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 9.580e-24
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 0
Query:   30 AGTEDPVRLRSLANQALVDIFSALEGNRWRNRDGWLTPGTDVKRWHGVIVEAGKLVSLNLISNDLK 95
            A  +D  ++R LANQALVD+F+AL G+RWRN+ GWLTPGTDVK+WHGV V AG LVSLNL+SNDL+
Sbjct:    5 ADNKDLRQIRRLANQALVDVFNALGGDRWRNKSGWLTPGTDVKKWHGVTVNAGSLVSLNLMSNDLE 70          
BLAST of Ec-sdr_f_000110.1 vs. uniprot
Match: E0NS48_9BACT (Leucine Rich Repeat protein n=1 Tax=Prevotella marshii DSM 16973 = JCM 13450 TaxID=862515 RepID=E0NS48_9BACT)

HSP 1 Score: 86.3 bits (212), Expect = 5.660e-15
Identity = 47/140 (33.57%), Postives = 79/140 (56.43%), Query Frame = 0
Query:    6 LLCLDRIRLFMAISANGDDTGSIFAGTEDPV--RLRSLANQ-----ALVDIFSALEGNRWRNRDGWLTPGTDVKRWHGVIVEAGKLVSLNLISNDLKGAIPSTINNLATLKELNMSYNFGLVGALPMEVGSMVNLTVLHI 138
            L C+  + +   +++ G D  S   GT++     ++S   +     ALVD ++AL+G  W   +GWL     +K W+GV V  G++VSL L+ N+LKG +P +I  L+ L+  N+SYN  L G++P E+ ++  L  L +
Sbjct:   43 LCCISALSMVALLASCGSDITSEEQGTKEKQVSNMKSRVTESSDSLALVDFYNALDGGHWYKNEGWLEK--PLKDWYGVKVANGRVVSLCLVHNNLKGKLPESIGKLSRLQRFNLSYNTDLGGSIPDEIYNLTELKSLKL 180          
BLAST of Ec-sdr_f_000110.1 vs. uniprot
Match: D7G175_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G175_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.060e-13
Identity = 38/47 (80.85%), Postives = 40/47 (85.11%), Query Frame = 0
Query:   95 KGAIPSTINNLATLKELNMSYNFGLVGALPMEVGSMVNLTVLHIYCA 141
            KG IPSTI+NL TL ELNMSYNFG+VG LP EVGSM NLTVLHIY A
Sbjct:   27 KGTIPSTISNLVTLNELNMSYNFGVVGFLPREVGSMANLTVLHIYSA 73          
BLAST of Ec-sdr_f_000110.1 vs. uniprot
Match: A0A484DS87_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DS87_BRELC)

HSP 1 Score: 79.0 bits (193), Expect = 1.440e-12
Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = 0
Query:   33 EDPVRLRSLANQALVDIFSALEGNRWRNRDGWLTPGTDVKRWHGVIVEAGKLVSLNLISNDLKGAIPST-INNLATLKELNMSYNFGLVGALPMEVGSM 130
            + P  + +   +ALVD++ AL G+RWR RDGW  P  D K W GV V  G +V+L L +N+L G +PST +  L  L  L++S N  L G++P E+G +
Sbjct:    3 QGPSAIPTSEVKALVDLYDALNGDRWRRRDGWKQPTRDPKHWFGVEVVMGHVVALELPTNELSGCLPSTSLARLPHLCVLDLSKN-QLRGSIPAELGKL 100          
BLAST of Ec-sdr_f_000110.1 vs. uniprot
Match: A0A0P1AJX1_PLAHL (Leucine rich repeat protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJX1_PLAHL)

HSP 1 Score: 78.6 bits (192), Expect = 2.130e-12
Identity = 40/90 (44.44%), Postives = 60/90 (66.67%), Query Frame = 0
Query:   45 ALVDIFSALEGNRWRNRDGWLTPGTDVKRWHGVIVEAGKLVSLNLISNDLKGAIPST-INNLATLKELNMSYNFGLVGALPMEVGSMVNL 133
            ALV+++ AL G+RWR RDGW  P  D ++W GV V  G +V+L L +N+L G +P+T +  L  L+ LN+S N  L G +P E+G+++ L
Sbjct:   15 ALVELYDALNGDRWRRRDGWKQPTRDPEQWFGVEVVMGHVVALELPANELIGCLPTTCLARLPQLRILNLSKNL-LHGEIPAELGTLLAL 103          
BLAST of Ec-sdr_f_000110.1 vs. uniprot
Match: D0NG45_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NG45_PHYIT)

HSP 1 Score: 77.0 bits (188), Expect = 4.050e-12
Identity = 38/87 (43.68%), Postives = 58/87 (66.67%), Query Frame = 0
Query:   45 ALVDIFSALEGNRWRNRDGWLTPGTDVKRWHGVIVEAGKLVSLNLISNDLKGAIPS-TINNLATLKELNMSYNFGLVGALPMEVGSM 130
            ALVD++ AL G+RWR RDGW  P  D + W+GV V  G +V+L L +N+L G +P+ ++  L  L+ L++S N  L G +P E+G++
Sbjct:   15 ALVDLYDALNGDRWRRRDGWKQPTRDPEHWYGVKVVMGHVVALELPANELSGCLPAASLAQLPQLRVLDLSKN-QLRGEIPAELGTL 100          
BLAST of Ec-sdr_f_000110.1 vs. uniprot
Match: A0A3M6VBB7_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBB7_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 7.140e-12
Identity = 39/90 (43.33%), Postives = 60/90 (66.67%), Query Frame = 0
Query:   45 ALVDIFSALEGNRWRNRDGWLTPGTDVKRWHGVIVEAGKLVSLNLISNDLKGAIPS-TINNLATLKELNMSYNFGLVGALPMEVGSMVNL 133
            ALV+++ AL G+RWR RDGW     D ++W GV V  G +V+L L +NDL G +P+ ++  L  L+ L++S N  L G +P+EVG++ +L
Sbjct:   15 ALVELYDALNGDRWRRRDGWKQTTHDPEQWFGVEVSMGHVVALELRANDLSGCLPAASLTRLPQLRVLDLSKN-RLQGDIPVEVGTLRSL 103          
BLAST of Ec-sdr_f_000110.1 vs. uniprot
Match: W2H4N1_PHYPR (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2H4N1_PHYPR)

HSP 1 Score: 74.7 bits (182), Expect = 4.020e-11
Identity = 37/87 (42.53%), Postives = 57/87 (65.52%), Query Frame = 0
Query:   45 ALVDIFSALEGNRWRNRDGWLTPGTDVKRWHGVIVEAGKLVSLNLISNDLKGAIPS-TINNLATLKELNMSYNFGLVGALPMEVGSM 130
            ALV+++ AL G+RWR RDGW  P  D ++W GV V  G +V+L L +N L G +P+ ++  L  L+ L++S N  L G +P E+G++
Sbjct:   15 ALVELYDALNGDRWRRRDGWKQPTRDPEQWFGVEVVMGHVVALELPANQLSGCLPAASLTRLPQLRVLDLSKN-QLRGEIPAELGTL 100          
BLAST of Ec-sdr_f_000110.1 vs. uniprot
Match: A0A3F2RJP5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJP5_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 5.010e-11
Identity = 38/87 (43.68%), Postives = 58/87 (66.67%), Query Frame = 0
Query:   45 ALVDIFSALEGNRWRNRDGWLTPGTDVKRWHGVIVEAGKLVSLNLISNDLKGAIPS-TINNLATLKELNMSYNFGLVGALPMEVGSM 130
            ALV+I+ AL G+RWR RDGW  P  D ++W GV V  G +V+L L +N+L G +P+ ++  L  L+ L++S N  L G +P E+G++
Sbjct:  243 ALVEIYDALGGDRWRRRDGWKQPTQDPEQWFGVEVTMGHVVALELPANELSGCLPAESLARLPQLRVLDLSKN-QLRGEIPAELGTL 328          
BLAST of Ec-sdr_f_000110.1 vs. uniprot
Match: H3GFP3_PHYRM (Crinkler domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFP3_PHYRM)

HSP 1 Score: 74.3 bits (181), Expect = 1.020e-10
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0
Query:   45 ALVDIFSALEGNRWRNRDGWLTPGTDVKRWHGVIVEAGKLVSLNLISNDLKGAIPS-TINNLATLKELNMSYNFGLVGALPMEVGS 129
            ALV+++ AL G+RWR RDGW  P  D ++W GV V  G +V+L L +N+L G +P+ ++  L  L+ L++S N  L G LP E+G+
Sbjct:   15 ALVELYDALGGDRWRRRDGWKQPTRDPEQWFGVEVAMGHVVALELPANELSGCLPAASLAQLPQLRVLDLSKN-QLRGELPAELGA 99          
The following BLAST results are available for this feature:
BLAST of Ec-sdr_f_000110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV03_ECTSI9.580e-2469.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
E0NS48_9BACT5.660e-1533.57Leucine Rich Repeat protein n=1 Tax=Prevotella mar... [more]
D7G175_ECTSI1.060e-1380.85Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A484DS87_BRELC1.440e-1242.42Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A0P1AJX1_PLAHL2.130e-1244.44Leucine rich repeat protein n=1 Tax=Plasmopara hal... [more]
D0NG45_PHYIT4.050e-1243.68Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
A0A3M6VBB7_9STRA7.140e-1243.33Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
W2H4N1_PHYPR4.020e-1142.53Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A3F2RJP5_9STRA5.010e-1143.68Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
H3GFP3_PHYRM1.020e-1044.19Crinkler domain-containing protein n=1 Tax=Phytoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 370..371
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 109..242
NoneNo IPR availablePANTHERPTHR27000:SF584LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2coord: 109..242
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 55..176
NoneNo IPR availablePANTHERPTHR27000:SF584LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2coord: 55..176
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.47
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 73..254
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 42..285
e-value: 1.1E-44
score: 154.7
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 179..238
e-value: 1.7E-9
score: 37.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sdr_fcontigsdr_f:410921..462753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-sdr_f_000110.1Ec-sdr_f_000110.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAsdr_f 410921..462753 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-sdr_f_000110.1 ID=Ec-sdr_f_000110.1|Name=Ec-sdr_f_000110.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=371bp
MSSAWLLCLDRIRLFMAISANGDDTGSIFAGTEDPVRLRSLANQALVDIF
SALEGNRWRNRDGWLTPGTDVKRWHGVIVEAGKLVSLNLISNDLKGAIPS
TINNLATLKELNMSYNFGLVGALPMEVGSMVNLTVLHIYCAGIHGPIPES
LSQLHRLEELWLNGNRLNGSIPDGLGLLSHLRELYLNANELAGSIPSSFS
NLTNLEGLNVSWNHLSGGFPPCLGGMVSLRLLVLEGNDDLEDRPPVSHGT
ELLEWLTSKRAAVACGYQPGLDLSDLHGEPEGMFSTLEAQGQHGSSKRHC
AGNPSALDNVVPKGPCSEEKRQLVATYVNSETSPSLQDVLEGETEPPFHL
EALRTFTASHLMEENIDFLLE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt