Ec-28_003540.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_003540.1
Unique Name	Ec-28_003540.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	518

Homology

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BLAST of Ec-28_003540.1 vs. uniprot
Match: A0A6H5JU38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU38_9PHAE)

HSP 1 Score: 770 bits (1988), Expect = 2.690e-277
Identity = 424/490 (86.53%), Postives = 432/490 (88.16%), Query Frame = 0

Query:   37 MGQPAPGWEDVEPSAEGHDGGSG-RTAVGKLWRQPLRALNHCSSDANMTPAVPTTVVDARDSDLGHVACAPTSN-ASLGGRPQDTEIREAHGGGLQGLEGEKVGEGTSKGLSVWRGQQQXXXXXXXXXXXXXLQ--REGVVVVGEIEQRK--QEDKAGATEFDVGPFEGEHNYNIRHHNXXXXXXXXXXXXXXXXXXXDSSRVRGFHDMICIGFAVSLILNLGSFTARKEGYFAAEVKCLPQGASQTVLPDLGVWVGWRQAVANSDEAVTFNLEEMSMVGAVMGILTVVGNATDGLLNAVGLAVLLYGRRKPLQEAQCRMVKRLCLASLAMAGWLLGTTIIGFLIAVKGPIGAAAVAFYSEEFDLDCGNSVSVSVDYAYAMATLTVLCQFFIGIVALPKPSRSSPQNRRRR-FCCRWNPAGVLLARLGLGDSSPAFDENELPSFAGEAGQPAAAEGPVKAKGSRRGSRLTAEGVVEGGVG--RERSFDPV 517
            M QPAPGWEDVEPSAEGHDGGS  RTAVG LWR PL ALNHCSSDA MTPAVPTTVVDARDSDLGHV CAPTS+ ASLGGRPQDTE RE HG GL  LE EKVGEGTSKGLSVWRGQQQ   XXXXXXXXXXLQ  REGVVVVGEIEQR+  QEDKAGATEFDVGPFEG HN++IRHH                    DSSRVRGFHDMICIGFAVSLILNLGSFTARKEGYFAAEVKCLPQGASQTVLPDLGVWVGWRQAVANS+EAVTFNLEEMSMVGAVMGILTVVGNATDGLLNAVGLAVLLYGRRKPLQEAQCRMVKRLCLASLAMAGWL+G T+IGFLIAVKGPIGAAAVAFYSEEFDLDCGNSVSV       MATLTVLCQFFIGIVALPKPSRSSPQNRRRR FCCRWNPAGVLLA LGLG SS AFDENELPSFAGEAGQPAAAEGPVKAKGSRRGSRL AEG+VEGGVG  RERSFDPV
Sbjct:    1 MVQPAPGWEDVEPSAEGHDGGSSNRTAVGNLWRHPLGALNHCSSDAKMTPAVPTTVVDARDSDLGHVECAPTSSSASLGGRPQDTETREPHGEGLH-LEAEKVGEGTSKGLSVWRGQQQQRQXXXXXXXXXXLQDEREGVVVVGEIEQRQRQQEDKAGATEFDVGPFEGRHNFSIRHH----IDNGSSTSGGERRGGGDSSRVRGFHDMICIGFAVSLILNLGSFTARKEGYFAAEVKCLPQGASQTVLPDLGVWVGWRQAVANSEEAVTFNLEEMSMVGAVMGILTVVGNATDGLLNAVGLAVLLYGRRKPLQEAQCRMVKRLCLASLAMAGWLMGMTVIGFLIAVKGPIGAAAVAFYSEEFDLDCGNSVSVXXXXXXXMATLTVLCQFFIGIVALPKPSRSSPQNRRRRRFCCRWNPAGVLLAHLGLGGSSAAFDENELPSFAGEAGQPAAAEGPVKAKGSRRGSRLMAEGIVEGGVGVGRERSFDPV 485

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BLAST of Ec-28_003540.1 vs. uniprot
Match: D8LTM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM4_ECTSI)

HSP 1 Score: 518 bits (1333), Expect = 5.600e-181
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0

Query:  239 MICIGFAVSLILNLGSFTARKEGYFAAEVKCLPQGASQTVLPDLGVWVGWRQAVANSDEAVTFNLEEMSMVGAVMGILTVVGNATDGLLNAVGLAVLLYGRRKPLQEAQCRMVKRLCLASLAMAGWLLGTTIIGFLIAVKGPIGAAAVAFYSEEFDLDCGNSVSVSVDYAYAMATLTVLCQFFIGIVALPKPSRSSPQNRRRRFCCRWNPAGVLLARLGLGDSSPAFDENELPSFAGEAGQPAAAEGPVKAKGSRRGSRLTAE 501
            MICIGFAVSLILNLGSFTARKEGYFAAEVKCLPQGASQTVLPDLGVWVGWRQAVANSDEAVTFNLEEMSMVGAVMGILTVVGNATDGLLNAVGLAVLLYGRRKPLQEAQCRMVKRLCLASLAMAGWLLGTTIIGFLIAVKGPIGAAAVAFYSEEFDLDCGNSVSVSVDYAYAMATLTVLCQFFIGIVALPKPSRSSPQNRRRRFCCRWNPAGVLLARLGLGDSSPAFDENELPSFAGEAGQPAAAEGPVKAKGSRRGSRLTAE
Sbjct:    1 MICIGFAVSLILNLGSFTARKEGYFAAEVKCLPQGASQTVLPDLGVWVGWRQAVANSDEAVTFNLEEMSMVGAVMGILTVVGNATDGLLNAVGLAVLLYGRRKPLQEAQCRMVKRLCLASLAMAGWLLGTTIIGFLIAVKGPIGAAAVAFYSEEFDLDCGNSVSVSVDYAYAMATLTVLCQFFIGIVALPKPSRSSPQNRRRRFCCRWNPAGVLLARLGLGDSSPAFDENELPSFAGEAGQPAAAEGPVKAKGSRRGSRLTAE 263

The following BLAST results are available for this feature:

BLAST of Ec-28_003540.1 vs. uniprot

BLAST of Ec-28_003540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JU38_9PHAE	2.690e-277	86.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LTM4_ECTSI	5.600e-181	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 407..428
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 239..257
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 339..358
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 359..387
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..238
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 311..338
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 429..517
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 258..310
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 388..406
None	No IPR available	TMHMM	TMhelix		coord: 405..427
None	No IPR available	TMHMM	TMhelix		coord: 354..376
None	No IPR available	TMHMM	TMhelix		coord: 315..337

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:3350728..3357928 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_003540.1	Ec-28_003540.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 3350728..3357928 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_003540.1 ID=Ec-28_003540.1|Name=Ec-28_003540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=518bp
MEAGRNQACPKTTGCDLQRQGEYPQEEKADDSLAHAMGQPAPGWEDVEPS
AEGHDGGSGRTAVGKLWRQPLRALNHCSSDANMTPAVPTTVVDARDSDLG
HVACAPTSNASLGGRPQDTEIREAHGGGLQGLEGEKVGEGTSKGLSVWRG
QQQQQQQDEREDVRQDLQREGVVVVGEIEQRKQEDKAGATEFDVGPFEGE
HNYNIRHHNDNGNSTSGGERRGGGGGGGDSSRVRGFHDMICIGFAVSLIL
NLGSFTARKEGYFAAEVKCLPQGASQTVLPDLGVWVGWRQAVANSDEAVT
FNLEEMSMVGAVMGILTVVGNATDGLLNAVGLAVLLYGRRKPLQEAQCRM
VKRLCLASLAMAGWLLGTTIIGFLIAVKGPIGAAAVAFYSEEFDLDCGNS
VSVSVDYAYAMATLTVLCQFFIGIVALPKPSRSSPQNRRRRFCCRWNPAG
VLLARLGLGDSSPAFDENELPSFAGEAGQPAAAEGPVKAKGSRRGSRLTA
EGVVEGGVGRERSFDPV*