Ec-28_003530.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_003530.2
Unique NameEc-28_003530.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length251
Homology
BLAST of Ec-28_003530.2 vs. uniprot
Match: D8LTM5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM5_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 5.410e-106
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
Query:   95 MLRGRHTRMTSFGAGIGGGGGEESNALLLRMDFEDADAEELRQWIRRYPFGTALPVQPFSLVETVTGVDVVFRKKPTLERGSQDGGLCFTIEDKVSGEEIDVLTGPTLIMRRISEGQEIRKMFAERIVVKAVVKSLAGDGAPPGTKVRTVLHEGLV 250
            MLRGRHTRMTSFGAGIGGGGGEESNALLLRMDFEDADAEELRQWIRRYPFGTALPVQPFSLVETVTGVDVVFRKKPTLERGSQDGGLCFTIEDKVSGEEIDVLTGPTLIMRRISEGQEIRKMFAERIVVKAVVKSLAGDGAPPGTKVRTVLHEGLV
Sbjct:    1 MLRGRHTRMTSFGAGIGGGGGEESNALLLRMDFEDADAEELRQWIRRYPFGTALPVQPFSLVETVTGVDVVFRKKPTLERGSQDGGLCFTIEDKVSGEEIDVLTGPTLIMRRISEGQEIRKMFAERIVVKAVVKSLAGDGAPPGTKVRTVLHEGLV 156          
BLAST of Ec-28_003530.2 vs. uniprot
Match: A0A7S0L9D0_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L9D0_9EUKA)

HSP 1 Score: 84.0 bits (206), Expect = 1.970e-16
Identity = 41/114 (35.96%), Postives = 69/114 (60.53%), Query Frame = 0
Query:  121 LLLRMDFEDADAEELRQWIRRYPFGTALPVQPFSLVETVT----GVDVVFRKKPTLERGSQDGGLCFTIEDKVSGEEIDVLTGPTLIMRRISEGQEIRKMFAERIVVKAVVKSL 230
            +LL++     D+  L+QW+ R PF +ALPVQP  ++        G+D+ FR+KPT+++ S +GGL F +     GE   V     L++ R+S GQ I K F+ER++++ +++ L
Sbjct:   28 VLLKVTLARCDSHGLQQWLLRRPFASALPVQPMLVLPIKDPPPLGIDLTFRRKPTMDKSSSEGGLRFAVSAPGDGEAGVVDGDGILLVTRVSSGQSIGKGFSERVLIEMLLREL 141          
BLAST of Ec-28_003530.2 vs. uniprot
Match: A0A7S0P2Y7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P2Y7_9EUKA)

HSP 1 Score: 79.7 bits (195), Expect = 5.970e-15
Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 0
Query:  121 LLLRMDFEDADAEELRQWIRRYPFGTALPVQPF---SLVETVTGVDVVFRKKPTLERGSQDGGLCFTIEDKVSGEEIDVLTGPTLIMRRISEGQEIRKMFAERIVVKAVVKSL 230
            +LL++     +++ L+ W+RR PF   LP+QP    +L     GVDV FR+KP+ E+G+QDGG+   I     G +       +L++ RISEGQ   K F+ER + +++V+ L
Sbjct:   36 VLLQVRLSSVNSDALQDWLRRRPFAAVLPIQPMLVQALQPPQQGVDVTFRRKPSSEKGAQDGGIRIAI-----GHD-------SLLVTRISEGQYTSKAFSERALCRSIVRDL 136          
BLAST of Ec-28_003530.2 vs. uniprot
Match: A0A7S2CIM1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CIM1_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 8.860e-11
Identity = 39/140 (27.86%), Postives = 71/140 (50.71%), Query Frame = 0
Query:  123 LRMDFEDADAEELRQWIRRYPFGTALPVQPFSLVE------------TVTGVDVVFRKKPTLERGSQDGGLCFTIEDKVSGEEIDVLTGPTLIMRRISEGQEIRKMFAERIVVKAVVKSLAGDGAPPGTKVRTVLHEGLV 250
            + +  E    +EL++W++ YP+   LPVQP  LV+            T   + V FR+KPT  +G  DGG+  T+   V   + D+     L +R +SEG  + K  +++++ K++++ L      P   + +VLH  ++
Sbjct:    8 VALSSEAGGIDELKRWLKAYPYPAVLPVQPM-LVDREWSCDNRPDEPTAETLRVTFRRKPTDAKGPVDGGIEITLVTGVDAADHDL----ALTLRALSEGNYVDKSLSQKLLAKSIIRDLP---RVPKVSITSVLHSAML 139          
BLAST of Ec-28_003530.2 vs. uniprot
Match: A0A7S4IU80_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IU80_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.570e-7
Identity = 32/92 (34.78%), Postives = 48/92 (52.17%), Query Frame = 0
Query:  109 GIGGGGGEESNALLLRMDF-------------EDADAEELRQWIRRYPFGTALPVQPFSLVETVTG--VDVVFRKKPTLERGSQDGGLCFTI 185
            G  G  G++ + LL R+               +DA  E++R ++R +PF   LPVQP + + T  G  V V F +K T E+GS DGG+ F +
Sbjct:   24 GFDGAEGDDDDVLLXRLTLSVXXXXXXXXXXXKDAILEDVRSYVRSFPFAAVLPVQPLTYIPTADGGGVKVTFLRKKTKEKGSVDGGIDFDV 115          
BLAST of Ec-28_003530.2 vs. uniprot
Match: A0A7S1VGN9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VGN9_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 5.790e-5
Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 0
Query:  117 ESNALLLRM--------DFEDADAEELRQWIRRYPFGTALPVQPFSLVETVTG-VDVVFRKKPTLERGSQDGGLCFTIEDKVSGEEIDVLTGPTLIMRRISEGQ 211
            ++  +LL+M        D EDA A+ ++ + + +PF   LPVQP   + T  G VDV+F +K T E+GS DGG+ F +   V G++  V     + ++R S+GQ
Sbjct:   53 DNEEILLKMNLSVEPGADPEDALAK-VQAYTQAFPFAAVLPVQPLQYLPTHEGGVDVLFLRKKTKEKGSVDGGIRFFVS-LVDGDQTTV----DVEVKRNSKGQ 150          
The following BLAST results are available for this feature:
BLAST of Ec-28_003530.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LTM5_ECTSI5.410e-106100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0L9D0_9EUKA1.970e-1635.96Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S0P2Y7_9EUKA5.970e-1537.17Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S2CIM1_9STRA8.860e-1127.86Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4IU80_9STRA1.570e-734.78Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1VGN9_9STRA5.790e-535.58Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..250
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..21
score: 0.507
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:3346606..3349175 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003530.2Ec-28_003530.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 3346513..3349661 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_003530.2 ID=Ec-28_003530.2|Name=Ec-28_003530.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=251bp
MGPQTAATVAIVAICISLAQTTAVAFVATSASRAAAAAAAAAARGRRATC
QTFFGPDGCWALRETLSRTITAVPPLQYRQSSSYPSWLGGRRHRMLRGRH
TRMTSFGAGIGGGGGEESNALLLRMDFEDADAEELRQWIRRYPFGTALPV
QPFSLVETVTGVDVVFRKKPTLERGSQDGGLCFTIEDKVSGEEIDVLTGP
TLIMRRISEGQEIRKMFAERIVVKAVVKSLAGDGAPPGTKVRTVLHEGLV
*
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