Ec-28_003420.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_003420.1
Unique Name	Ec-28_003420.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	841

Homology

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BLAST of Ec-28_003420.1 vs. uniprot
Match: D8LTN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN5_ECTSI)

HSP 1 Score: 1564 bits (4050), Expect = 0.000e+0
Identity = 840/840 (100.00%), Postives = 840/840 (100.00%), Query Frame = 0

Query:    1 MLRRPPKKMPPSSTAVKDKVVRMFGQRSMRTLLDALSHTPVGVVEHVGSVLALCACVVEAGLTASRALTFPSPTVGGVATANGSLAITDEGRKRAAAIVDHARQLRRLHLRANNTEKNIPRSRANKHQMLGPRRAGTIGVKGEEAMMALGDLGKWAIVHKRNLPCLMKILQAAEALLLSDALLVRHFARMIGAQEAREALVEAGIFLGHVTQTCDALVEEVRRRAIAAVSVQRFWRGARVQRHQQAADPGHLGDDSLEEAKVPTAGGTVAFLPASRTNRHVGSDDIHQLAAAEMVRAVDSALFLAGTRTKAAVVLQRWTRIRRSRQYREEARVRMRTERLVTAAVGVQALARGISARRHASRATRRAAXXVTVQAFWRGLLGWKRARSREFGVVFLQRWWRYTTALSHLSRISALAQTRNLESLADSASYVRRITLGIFSHDEPTLGLSASRYPRKVWIHKQWTRQMITPLSPSSVGRLGRSQRDSRLGIADCDHRDASLSLHLAKARFEMEQRSTPKAAGDILRALVTRHFSQPPALGKLTSALRRRKNRVGGDGSLSLTHRTGEMAAVRAGQGQHAPGLTPRFIEGKENHXXXXXXXXXXXXXXXXXXXXGPACAIDGSDGMPVSPGKGPEPRTAVSGAFRGEPLQDIDGAKFPSEIPSRTVQPTLGLASTDRCEVAAGPSAPDGGKSASPCLSIVDEVASQQADAHRKTSRGLGMEYDAPLARPSCQTGNGTDLAARATSTAPLQRAEKATNVPQTPSSPTDAPSAGMRLLHRHRQRHRGDSDEQTAATAAGAPLLPGGCRAAVPHGQCLPPETCRPPPARPSHQFWTAPSRTRPEG 840
            MLRRPPKKMPPSSTAVKDKVVRMFGQRSMRTLLDALSHTPVGVVEHVGSVLALCACVVEAGLTASRALTFPSPTVGGVATANGSLAITDEGRKRAAAIVDHARQLRRLHLRANNTEKNIPRSRANKHQMLGPRRAGTIGVKGEEAMMALGDLGKWAIVHKRNLPCLMKILQAAEALLLSDALLVRHFARMIGAQEAREALVEAGIFLGHVTQTCDALVEEVRRRAIAAVSVQRFWRGARVQRHQQAADPGHLGDDSLEEAKVPTAGGTVAFLPASRTNRHVGSDDIHQLAAAEMVRAVDSALFLAGTRTKAAVVLQRWTRIRRSRQYREEARVRMRTERLVTAAVGVQALARGISARRHASRATRRAAXXVTVQAFWRGLLGWKRARSREFGVVFLQRWWRYTTALSHLSRISALAQTRNLESLADSASYVRRITLGIFSHDEPTLGLSASRYPRKVWIHKQWTRQMITPLSPSSVGRLGRSQRDSRLGIADCDHRDASLSLHLAKARFEMEQRSTPKAAGDILRALVTRHFSQPPALGKLTSALRRRKNRVGGDGSLSLTHRTGEMAAVRAGQGQHAPGLTPRFIEGKENHXXXXXXXXXXXXXXXXXXXXGPACAIDGSDGMPVSPGKGPEPRTAVSGAFRGEPLQDIDGAKFPSEIPSRTVQPTLGLASTDRCEVAAGPSAPDGGKSASPCLSIVDEVASQQADAHRKTSRGLGMEYDAPLARPSCQTGNGTDLAARATSTAPLQRAEKATNVPQTPSSPTDAPSAGMRLLHRHRQRHRGDSDEQTAATAAGAPLLPGGCRAAVPHGQCLPPETCRPPPARPSHQFWTAPSRTRPEG
Sbjct:    1 MLRRPPKKMPPSSTAVKDKVVRMFGQRSMRTLLDALSHTPVGVVEHVGSVLALCACVVEAGLTASRALTFPSPTVGGVATANGSLAITDEGRKRAAAIVDHARQLRRLHLRANNTEKNIPRSRANKHQMLGPRRAGTIGVKGEEAMMALGDLGKWAIVHKRNLPCLMKILQAAEALLLSDALLVRHFARMIGAQEAREALVEAGIFLGHVTQTCDALVEEVRRRAIAAVSVQRFWRGARVQRHQQAADPGHLGDDSLEEAKVPTAGGTVAFLPASRTNRHVGSDDIHQLAAAEMVRAVDSALFLAGTRTKAAVVLQRWTRIRRSRQYREEARVRMRTERLVTAAVGVQALARGISARRHASRATRRAAXXVTVQAFWRGLLGWKRARSREFGVVFLQRWWRYTTALSHLSRISALAQTRNLESLADSASYVRRITLGIFSHDEPTLGLSASRYPRKVWIHKQWTRQMITPLSPSSVGRLGRSQRDSRLGIADCDHRDASLSLHLAKARFEMEQRSTPKAAGDILRALVTRHFSQPPALGKLTSALRRRKNRVGGDGSLSLTHRTGEMAAVRAGQGQHAPGLTPRFIEGKENHXXXXXXXXXXXXXXXXXXXXGPACAIDGSDGMPVSPGKGPEPRTAVSGAFRGEPLQDIDGAKFPSEIPSRTVQPTLGLASTDRCEVAAGPSAPDGGKSASPCLSIVDEVASQQADAHRKTSRGLGMEYDAPLARPSCQTGNGTDLAARATSTAPLQRAEKATNVPQTPSSPTDAPSAGMRLLHRHRQRHRGDSDEQTAATAAGAPLLPGGCRAAVPHGQCLPPETCRPPPARPSHQFWTAPSRTRPEG 840

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BLAST of Ec-28_003420.1 vs. uniprot
Match: A0A6H5JN79_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN79_9PHAE)

HSP 1 Score: 427 bits (1098), Expect = 8.180e-131
Identity = 259/399 (64.91%), Postives = 280/399 (70.18%), Query Frame = 0

Query:    1 MLRRPPKKMPPSSTAVKDKVVRMFGQRSMRTLLDALSHTPVGVVEHVGSVLALCACVVEAGLTASRALTFPSPTVGGVATANGSLAITDEGRKRAAAIVDHARQLRRLHLRANNTEKNIPRSRANKHQMLGPRRAGTIGVKGEEAMMALGDLGKWAIVHKRNLPCLMKILQAAEALLLSDALLVRHFARMIGAQEAREALVEAGIFLGHVTQTCDALVEEVRRRAIAAVSVQRFWRGARVQRH-QQAADPGHLGDDSLEEAKVPTAGGTVAFLPASRTNRHVGSDDIHQLAAAEMVRAVDSALFLAGTRTKAAVVLQRWTRIRRSRQYREEARVRMRTERLVTAAVGVQALARGISARRHASRATRRAAXXVTVQAFWRGLLGWKRARSREFGVVFLQR 398
            MLRRPPK+M PSS A KD+ V MF +R MRTLLDALSHTPV VVEHVGSVLALCA VVEAGL AS A  FPS +VGGVATANGSLAITDEGRKRAAAIVDHA                                           MMALG L KWAIV +RNLPCLM+ILQAAEAL LSDALLVRHFARMIGAQEAREALVE G+FLGHVTQTCD +VEE +RRAIAAVSV+RFWR ARV+RH QQA DPGH+GD+SL+E K                                  R V+SALFLAGTRT AAVVLQRW RIR SRQ +EEARVRMR ERLVTAAV VQALAR +SARRH S+A RRAA  + +QAFWR LL W RARSREFGVV L+R
Sbjct:  767 MLRRPPKEMSPSSIAAKDEAVPMFDRRPMRTLLDALSHTPVRVVEHVGSVLALCASVVEAGLPASWASAFPSRSVGGVATANGSLAITDEGRKRAAAIVDHA-------------------------------------------MMALGHLWKWAIVRRRNLPCLMQILQAAEALRLSDALLVRHFARMIGAQEAREALVEVGVFLGHVTQTCDVVVEEGKRRAIAAVSVKRFWRRARVRRHHQQATDPGHVGDESLDEVK----------------------------------RVVNSALFLAGTRTTAAVVLQRWNRIRISRQRQEEARVRMRAERLVTAAVRVQALAREMSARRHVSQAARRAAAAMAIQAFWRDLLEWTRARSREFGVVILRR 1088

The following BLAST results are available for this feature:

BLAST of Ec-28_003420.1 vs. uniprot

BLAST of Ec-28_003420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LTN5_ECTSI	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JN79_9PHAE	8.180e-131	64.91	Reverse transcriptase domain-containing protein n=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000048	IQ motif, EF-hand binding site	SMART	SM00015	iq_5	coord: 223..245 e-value: 24.0 score: 10.6 coord: 339..361 e-value: 57.0 score: 7.5 coord: 365..387 e-value: 12.0 score: 13.1
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 340..369 score: 7.181
IPR000048	IQ motif, EF-hand binding site	PROSITE	PS50096	IQ	coord: 366..390 score: 6.906

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:3242457..3245963 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_003420.1	Ec-28_003420.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 3242457..3245963 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_003420.1 ID=Ec-28_003420.1|Name=Ec-28_003420.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=841bp
MLRRPPKKMPPSSTAVKDKVVRMFGQRSMRTLLDALSHTPVGVVEHVGSV
LALCACVVEAGLTASRALTFPSPTVGGVATANGSLAITDEGRKRAAAIVD
HARQLRRLHLRANNTEKNIPRSRANKHQMLGPRRAGTIGVKGEEAMMALG
DLGKWAIVHKRNLPCLMKILQAAEALLLSDALLVRHFARMIGAQEAREAL
VEAGIFLGHVTQTCDALVEEVRRRAIAAVSVQRFWRGARVQRHQQAADPG
HLGDDSLEEAKVPTAGGTVAFLPASRTNRHVGSDDIHQLAAAEMVRAVDS
ALFLAGTRTKAAVVLQRWTRIRRSRQYREEARVRMRTERLVTAAVGVQAL
ARGISARRHASRATRRAAAAVTVQAFWRGLLGWKRARSREFGVVFLQRWW
RYTTALSHLSRISALAQTRNLESLADSASYVRRITLGIFSHDEPTLGLSA
SRYPRKVWIHKQWTRQMITPLSPSSVGRLGRSQRDSRLGIADCDHRDASL
SLHLAKARFEMEQRSTPKAAGDILRALVTRHFSQPPALGKLTSALRRRKN
RVGGDGSLSLTHRTGEMAAVRAGQGQHAPGLTPRFIEGKENHNNNTNTKS
SSNNNDSNSNNNGPACAIDGSDGMPVSPGKGPEPRTAVSGAFRGEPLQDI
DGAKFPSEIPSRTVQPTLGLASTDRCEVAAGPSAPDGGKSASPCLSIVDE
VASQQADAHRKTSRGLGMEYDAPLARPSCQTGNGTDLAARATSTAPLQRA
EKATNVPQTPSSPTDAPSAGMRLLHRHRQRHRGDSDEQTAATAAGAPLLP
GGCRAAVPHGQCLPPETCRPPPARPSHQFWTAPSRTRPEG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000048	IQ_motif_EF-hand-BS