Ec-28_003280.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_003280.1
Unique NameEc-28_003280.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length223
Homology
BLAST of Ec-28_003280.1 vs. uniprot
Match: D8LTP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP8_ECTSI)

HSP 1 Score: 414 bits (1065), Expect = 5.470e-146
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
Query:    1 MCKSSQPQGSSEAAPVAMEVPTNDSYDLAKPCAISDNEQPHQEVIAHDEASGIIVFGSFIAGALVGVVICAPAFVVLLFGAGAAALTKSDSKVGKFSRKVGKVSSDILLAVFRLAREYNHKHKLTDKAKVGAKEAAGKVTDKMRKLGIVDNVKARASSLWDQVDKRTAPAGQASIQAAQGQDLSQVTDGTQIPFDGAVDAYVTDSSSSSSYSKGRKPKSFDA 222
            MCKSSQPQGSSEAAPVAMEVPTNDSYDLAKPCAISDNEQPHQEVIAHDEASGIIVFGSFIAGALVGVVICAPAFVVLLFGAGAAALTKSDSKVGKFSRKVGKVSSDILLAVFRLAREYNHKHKLTDKAKVGAKEAAGKVTDKMRKLGIVDNVKARASSLWDQVDKRTAPAGQASIQAAQGQDLSQVTDGTQIPFDGAVDAYVTDSSSSSSYSKGRKPKSFDA
Sbjct:    1 MCKSSQPQGSSEAAPVAMEVPTNDSYDLAKPCAISDNEQPHQEVIAHDEASGIIVFGSFIAGALVGVVICAPAFVVLLFGAGAAALTKSDSKVGKFSRKVGKVSSDILLAVFRLAREYNHKHKLTDKAKVGAKEAAGKVTDKMRKLGIVDNVKARASSLWDQVDKRTAPAGQASIQAAQGQDLSQVTDGTQIPFDGAVDAYVTDSSSSSSYSKGRKPKSFDA 222          
BLAST of Ec-28_003280.1 vs. uniprot
Match: D8LTQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ0_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 7.680e-54
Identity = 109/198 (55.05%), Postives = 139/198 (70.20%), Query Frame = 0
Query:   23 NDSYDLAKPCAISDNEQPH---QEVIAHDEASGIIVFGSFIAGALVGVVIC------APAFVVLLFGAGAAALTKSDSKVGKFSRKVGKVSSDILLAVFRLAREYNHKHKLTDKAKVGAKEAAGKVTDKMRKLGIVDNVKARASSLWDQVDKRTAPAGQASIQAAQGQD-LSQVTDGTQIPFDGAVDAYVTDSSSSSS 210
            NDSY         D EQ H   +  +AHDE+S IIV GSF+AGALVG ++C      AP  VVLL GAGAA  TKSDSK G+ SR+VGK + D+ LA+FR+ RE+N+K++LT K ++ A+EAAGKV  ++++LGI D VK RA SLW+QVDKRTAPAGQ  I+AAQGQD +S + +  Q+ FD A DA  + S SSSS
Sbjct:   21 NDSY--------LDTEQEHHHDESTLAHDESSAIIVLGSFVAGALVGAILCVRVFMFAPTVVVLLCGAGAAVFTKSDSKAGQISREVGKWTCDVFLALFRVVREFNYKYQLTVKVRITAQEAAGKVKAEVQRLGICDGVKTRARSLWEQVDKRTAPAGQPPIRAAQGQDTISLMMEEPQLGFDDAADALESKSCSSSS 210          
BLAST of Ec-28_003280.1 vs. uniprot
Match: D8LTP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP9_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 1.270e-37
Identity = 96/203 (47.29%), Postives = 122/203 (60.10%), Query Frame = 0
Query:   23 NDSYDLAKPCAISDN-EQPHQE---VIAHDEASGIIVFGSFIAGALVGVVIC------APAFVVLLFGA------------GAAALTKSDSKVGKFSRKVGKVSSDILLAVFRLAREYNHKHKLTDKAKVGAKEAAGKVTDKMRKLGIVDNVKARASSLWDQVDKRTAPAGQAS--IQAAQGQD-LSQVTDGTQIPFDGAVDA 200
            +DS+  AK   + +  EQ H     ++ HDE+S I + GSF+AGA VG +IC      AP   +LL GA             AA +TKSDSK G  SR+ G   SD+LLA+FR  RE+N  ++LTDK K   +EAAGKV  +M+K+GI D+V  RA SLWDQVDKRTAPA Q S  +  AQGQD +S   +  Q  FD A DA
Sbjct:   21 DDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGTISRRAGNFISDVLLALFRGVREFNRTYQLTDKVKATVQEAAGKVQVEMQKVGICDHVMTRACSLWDQVDKRTAPAAQPSKFVHGAQGQDTISLFREEPQPGFDNAGDA 223          
BLAST of Ec-28_003280.1 vs. uniprot
Match: A0A6H5JUV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV7_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 5.000e-35
Identity = 77/147 (52.38%), Postives = 101/147 (68.71%), Query Frame = 0
Query:   36 DNEQPH---QEVIAHDEASGIIVFGSFIAGALVGVVICA------PAFVVLLFGAGAAALTKSDSKVGKF----------SRKVGKVSSDILLAVFRLAREYNHKHKLTDKAKVGAKEAAGKVTDKMRKLGIVDNVKARASSLWDQV 163
            D EQ H   +  +AHDE+S II+ GSF+AGAL+G +ICA      P  VVLL GAGAA  T SDS+VGKF          SR VGK +SD+ LA+FR+ RE+N+K++L DK K+ A+EAA KV  +++++GI D VK RA SLW+QV
Sbjct:   26 DTEQEHHHDESTLAHDESSAIIMLGSFVAGALMGAIICARVFMFAPMVVVLLCGAGAAVFTNSDSEVGKFVVRLRWAGQISRGVGKWTSDVFLALFRVVREFNYKYQLADKVKITAQEAARKVKAEVQRIGICDGVKTRARSLWEQV 172          
The following BLAST results are available for this feature:
BLAST of Ec-28_003280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LTP8_ECTSI5.470e-146100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LTQ0_ECTSI7.680e-5455.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LTP9_ECTSI1.270e-3747.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUV7_9PHAE5.000e-3552.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..86
NoneNo IPR availableTMHMMTMhelixcoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:3091872..3094639 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003280.1Ec-28_003280.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 3091872..3094639 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_003280.1 ID=Ec-28_003280.1|Name=Ec-28_003280.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=223bp
MCKSSQPQGSSEAAPVAMEVPTNDSYDLAKPCAISDNEQPHQEVIAHDEA
SGIIVFGSFIAGALVGVVICAPAFVVLLFGAGAAALTKSDSKVGKFSRKV
GKVSSDILLAVFRLAREYNHKHKLTDKAKVGAKEAAGKVTDKMRKLGIVD
NVKARASSLWDQVDKRTAPAGQASIQAAQGQDLSQVTDGTQIPFDGAVDA
YVTDSSSSSSYSKGRKPKSFDA*
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