Ec-28_003270.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_003270.1
Unique NameEc-28_003270.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length248
Homology
BLAST of Ec-28_003270.1 vs. uniprot
Match: D8LTP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP9_ECTSI)

HSP 1 Score: 459 bits (1182), Expect = 5.420e-163
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
Query:    1 MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGTISRRAGNFISDVLLALFRGVREFNRTYQLTDKVKATVQEAAGKVQVEMQKVGICDHVMTRACSLWDQVDKRTAPAAQPSKFVHGAQGQDTISLFREEPQPGFDNAGDAPKSAPCSPSSSENEKTAPVKLSDA 247
            MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGTISRRAGNFISDVLLALFRGVREFNRTYQLTDKVKATVQEAAGKVQVEMQKVGICDHVMTRACSLWDQVDKRTAPAAQPSKFVHGAQGQDTISLFREEPQPGFDNAGDAPKSAPCSPSSSENEKTAPVKLSDA
Sbjct:    1 MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGTISRRAGNFISDVLLALFRGVREFNRTYQLTDKVKATVQEAAGKVQVEMQKVGICDHVMTRACSLWDQVDKRTAPAAQPSKFVHGAQGQDTISLFREEPQPGFDNAGDAPKSAPCSPSSSENEKTAPVKLSDA 247          
BLAST of Ec-28_003270.1 vs. uniprot
Match: D8LTQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ0_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 5.520e-83
Identity = 154/247 (62.35%), Postives = 177/247 (71.66%), Query Frame = 0
Query:    1 MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGTISRRAGNFISDVLLALFRGVREFNRTYQLTDKVKATVQEAAGKVQVEMQKVGICDHVMTRACSLWDQVDKRTAPAAQPSKFVHGAQGQDTISLFREEPQPGFDNAGDAPKSAPCSPSSSENEKTAPVKLSDA 247
            M+S PRHQ SAPG EAAA R+DS+       +D  TEQ+HH D S L HDESSAI +LGSFVAGA VG ++CVR+FMFAP V +LLCGA             AAV TKSDSKAG ISR  G +  DV LALFR VREFN  YQLT KV+ T QEAAGKV+ E+Q++GICD V TRA SLW+QVDKRTAPA QP   +  AQGQDTISL  EEPQ GFD+A DA +S  CS SSSE+EKT  ++L DA
Sbjct:    1 MRSYPRHQVSAPGHEAAAVRNDSY-------LD--TEQEHHHDESTLAHDESSAIIVLGSFVAGALVGAILCVRVFMFAPTVVVLLCGA------------GAAVFTKSDSKAGQISREVGKWTCDVFLALFRVVREFNYKYQLTVKVRITAQEAAGKVKAEVQRLGICDGVKTRARSLWEQVDKRTAPAGQPP--IRAAQGQDTISLMMEEPQLGFDDAADALESKSCSSSSSEDEKTVRLRLFDA 224          
BLAST of Ec-28_003270.1 vs. uniprot
Match: A0A6H5JUV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV7_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 2.320e-53
Identity = 111/193 (57.51%), Postives = 128/193 (66.32%), Query Frame = 0
Query:    1 MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSK----------AGTISRRAGNFISDVLLALFRGVREFNRTYQLTDKVKATVQEAAGKVQVEMQKVGICDHVMTRACSLWDQV 183
            M SDPRH+GSAPG EA A R+D +       +D  TEQ+HH D S L HDESSAI MLGSFVAGA +G +IC R+FMFAP+V +LLCGA             AAV T SDS+          AG ISR  G + SDV LALFR VREFN  YQL DKVK T QEAA KV+ E+Q++GICD V TRA SLW+QV
Sbjct:    1 MHSDPRHRGSAPGHEAVAVRNDPY-------LD--TEQEHHHDESTLAHDESSAIIMLGSFVAGALMGAIICARVFMFAPMVVVLLCGA------------GAAVFTNSDSEVGKFVVRLRWAGQISRGVGKWTSDVFLALFRVVREFNYKYQLADKVKITAQEAARKVKAEVQRIGICDGVKTRARSLWEQV 172          
BLAST of Ec-28_003270.1 vs. uniprot
Match: A0A6H5JZU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU5_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 6.600e-52
Identity = 101/117 (86.32%), Postives = 105/117 (89.74%), Query Frame = 0
Query:    1 MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGTIS 117
            MQS+PRHQGSAPGSEAAANRDDS RHAKSFEVDNGTEQQH+RD SIL HDESSAITMLGSFVAGASVG MICVRLF+ APIVFLLLCGACVAV VV XXX  AAVVTKS SK  +IS
Sbjct:    1 MQSNPRHQGSAPGSEAAANRDDSCRHAKSFEVDNGTEQQHNRDRSILAHDESSAITMLGSFVAGASVGAMICVRLFVLAPIVFLLLCGACVAVTVVLXXXAGAAVVTKSHSKVESIS 117          
BLAST of Ec-28_003270.1 vs. uniprot
Match: D8LTP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP8_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 5.730e-40
Identity = 91/186 (48.92%), Postives = 116/186 (62.37%), Query Frame = 0
Query:   38 QQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGTISRRAGNFISDVLLALFRGVREFNRTYQLTDKVKATVQEAAGKVQVEMQKVGICDHVMTRACSLWDQVDKRTAPAAQPSKFVHGAQGQDTISLFREEPQPGFDNAGDA 223
            +Q H++  ++ HDE+S I + GSF+AGA VG +IC      AP   +LL GA             AA +TKSDSK G  SR+ G   SD+LLA+FR  RE+N  ++LTDK K   +EAAGKV  +M+K+GI D+V  RA SLWDQVDKRTAPA Q S  +  AQGQD +S   +  Q  FD A DA
Sbjct:   38 EQPHQE--VIAHDEASGIIVFGSFIAGALVGVVIC------APAFVVLLFGA------------GAAALTKSDSKVGKFSRKVGKVSSDILLAVFRLAREYNHKHKLTDKAKVGAKEAAGKVTDKMRKLGIVDNVKARASSLWDQVDKRTAPAGQAS--IQAAQGQD-LSQVTDGTQIPFDGAVDA 200          
BLAST of Ec-28_003270.1 vs. uniprot
Match: A0A6H5JV13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV13_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 3.850e-32
Identity = 63/74 (85.14%), Postives = 64/74 (86.49%), Query Frame = 0
Query:  112 KAGTISRRAGNFISDVLLALFRGVREFNRTYQLTDKVKATVQEAAGKVQVEMQKVGICDHVMTRACSLWDQVDK 185
            K GTISRRAGNF SDVLLAL R VRE NRT QL+DKVK TVQEAA KVQ EMQKVGICDHVMTRA SLWDQVDK
Sbjct:   20 KVGTISRRAGNFTSDVLLALLRVVREINRTCQLSDKVKVTVQEAARKVQAEMQKVGICDHVMTRARSLWDQVDK 93          
The following BLAST results are available for this feature:
BLAST of Ec-28_003270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LTP9_ECTSI5.420e-163100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LTQ0_ECTSI5.520e-8362.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUV7_9PHAE2.320e-5357.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZU5_9PHAE6.600e-5286.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTP8_ECTSI5.730e-4048.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JV13_9PHAE3.850e-3285.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..247
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 78..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:3087452..3089831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_003270.1Ec-28_003270.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 3087452..3089831 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_003270.1 ID=Ec-28_003270.1|Name=Ec-28_003270.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=248bp
MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHD
ESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVLLCG
AGAAVVTKSDSKAGTISRRAGNFISDVLLALFRGVREFNRTYQLTDKVKA
TVQEAAGKVQVEMQKVGICDHVMTRACSLWDQVDKRTAPAAQPSKFVHGA
QGQDTISLFREEPQPGFDNAGDAPKSAPCSPSSSENEKTAPVKLSDA*
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