Ec-28_002840.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_002840.1
Unique NameEc-28_002840.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length266
Homology
BLAST of Ec-28_002840.1 vs. uniprot
Match: D8LTT6_ECTSI (Putative initiation factor eIF3 g subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT6_ECTSI)

HSP 1 Score: 534 bits (1376), Expect = 5.780e-192
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
Query:    1 MPGRQAWGDDDDDDYLPPRQESAVDSKGVKSIVEYHFNTNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQGEDNPSSPIKWREEFRREPPRDSRKPEENPNSRGDPLKGPRGPRGGNHPMRTGARRGSPKEAALPEEEGLLRFSRSHLAVRALSGMDEVVPLLGQAWPRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR 265
            MPGRQAWGDDDDDDYLPPRQESAVDSKGVKSIVEYHFNTNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQGEDNPSSPIKWREEFRREPPRDSRKPEENPNSRGDPLKGPRGPRGGNHPMRTGARRGSPKEAALPEEEGLLRFSRSHLAVRALSGMDEVVPLLGQAWPRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR
Sbjct:    1 MPGRQAWGDDDDDDYLPPRQESAVDSKGVKSIVEYHFNTNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQGEDNPSSPIKWREEFRREPPRDSRKPEENPNSRGDPLKGPRGPRGGNHPMRTGARRGSPKEAALPEEEGLLRFSRSHLAVRALSGMDEVVPLLGQAWPRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR 265          
BLAST of Ec-28_002840.1 vs. uniprot
Match: A0A835YJN9_9STRA (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJN9_9STRA)

HSP 1 Score: 203 bits (517), Expect = 8.380e-61
Identity = 134/312 (42.95%), Postives = 170/312 (54.49%), Query Frame = 0
Query:    4 RQAWGDDDDD-DYLPPRQESAVDSKGVKSIVEYHFNTNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQGEDNPSSPIKWREEFRREPPRDSRKPEENPNSRGDPLKGPRGPRGGNHPMRTGARRGSPKEAALPEEEGLLRF-----------------------------------SRSHLAVRALS------GMDEVVPLLGQAWPRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVA--------TEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR 265
            R  WGD+DDD DYLPPRQES VD KG+K++VE+ FN  G K K TTKVKVF E  R+ ++  ER +W  FG AA+  DN S  +  +E+   E PR+S++ +E P++  D LK         + MR     G  + A   +E                                          R+ + V  +S       + E+    G+   RVYLAKDPETMQSRGFAFVS+  ++DAE AM  LQGYGYDHLILKLE+AKPS RD A            LS  R SGYG+ LAQDTK++VS+ASNLTR
Sbjct:    2 RGNWGDEDDDPDYLPPRQESGVDGKGIKTVVEWAFNDAGQKTKTTTKVKVFAEQQRISRAVAERKKWKVFGAAAEVSDNHSYTLTSQEQVMMETPRESKEADEQPSNVSDSLKEAMERVRRRNAMRQMGMLGDGEAAPTDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAPPMPLEDRTKIRVTNISEDTTEGDLRELFGTFGRIH-RVYLAKDPETMQSRGFAFVSFTSEADAERAMNKLQGYGYDHLILKLEFAKPSQRDAAGXXXXXXXXXXXLSSARVSGYGQALAQDTKERVSFASNLTR 312          
BLAST of Ec-28_002840.1 vs. uniprot
Match: A0A6H5KD36_9PHAE (eIF3g domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD36_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 5.540e-52
Identity = 98/145 (67.59%), Postives = 105/145 (72.41%), Query Frame = 0
Query:    1 MPGRQAWGDDDDDDYLPPRQESAVDSKGVKSIVEYHFNTNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQGEDNPSSPIKWREEFRREPPRDSRKPEENPNSRGDPLKGPRGPRGGNHPMRTGARRGSPKEAALPEEE 145
            MPGRQAWGD     YLPPRQESAVDS GVKSIVEYHFN NGAKVKRTTKVKVFTEHTRVHKSCLERTQW KFGLAAQ +DN S  +K  EE R E P++SR+ +E PNS  D LK         H MRT     S  EAA PE+E
Sbjct:   38 MPGRQAWGDXXXXXYLPPRQESAVDSNGVKSIVEYHFNANGAKVKRTTKVKVFTEHTRVHKSCLERTQWKKFGLAAQVDDNASHSMKSMEEIRMETPQESREADEKPNSMEDTLKEAMERMRRKHAMRTAGLLESTNEAAPPEDE 182          
BLAST of Ec-28_002840.1 vs. uniprot
Match: A0A8J2SWG8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWG8_9STRA)

HSP 1 Score: 144 bits (364), Expect = 5.760e-38
Identity = 121/316 (38.29%), Postives = 156/316 (49.37%), Query Frame = 0
Query:    6 AWGDDDDDDY-LPPRQESAVDSKGVKSIVEYHFNTNGAKVKRTTKVKVFTEHTRVHKSC---LERTQWNKFGLAAQGEDNPSSPI-----------------------------------KWRE---------EFRREPPRDSRKPEENPNSRGDPLKGPRGPRGGNHPMRTGARRGSPKEAALPEEEGLLRFSRSHLAVRALSGMDEVVPLLGQAWP-----RVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVAT----EGGLSGMRTSGYGERLAQDTKQQVSYASNLT 264
            AWGDDDD++  LP R E+AV+ KG K++VE+  N    KVK T ++ V    TR  K+    ++R + N+FG+A Q +D+ +  I                                    WR+         E    PP D   P   P  R   +  P   RG       G+     + AA+P+ +      +S L V  +S       L     P     R+YLAKD ETM SRGFAFVS+  + DAE AM ALQG+GYDHLILK+EWAKPS          EGGLS   TSGYG+ LAQDTK++VSYASNLT
Sbjct:    2 AWGDDDDEEEALPARTETAVNEKGFKTVVEWSRNAAEQKVKTTKEIFVKVVETRESKAVQGRVQRLRNNRFGIAGQEKDDSNVTIVAHNDERVTLEEEGGENDTQQNAAKASMNEFAKKQMWRKLQQKYGVEGEGGSMPPGDDAAPAAVPGMRTSYV--PPSMRGQAGAGVAGS--ALARMAAMPQYDDR---DQSSLRVTNISEETTEADLQVLFAPYGRIARIYLAKDRETMISRGFAFVSFVHRQDAERAMGALQGHGYDHLILKIEWAKPSAPKPDAGGGGEGGLSSGYTSGYGKALAQDTKERVSYASNLT 310          
BLAST of Ec-28_002840.1 vs. uniprot
Match: A0A0W8CA84_PHYNI (WD repeat-containing protein 36 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CA84_PHYNI)

HSP 1 Score: 139 bits (351), Expect = 2.180e-36
Identity = 113/269 (42.01%), Postives = 133/269 (49.44%), Query Frame = 0
Query:    7 WGDDDDDDYLPPRQESAVDSKGVKSIVEYHFNTNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQGEDNPSSPIKWREEFRREPP--------RDSRKPEENPNSRGDPL-----------KGPRGPRGGNHPMRTG---ARRGSPKEAALPEEEGLLRFSRSHLAVRALSGMDEVVPLLGQAWPRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMR-TSGYGERLAQD 252
            WGD++DD  LP R ES  DS GV+ IVE+  N  G KVK T KVK  TE  R+ K  LER +W KFG A    D  +      EE + E P        R  R+       R  PL            G        HP R     A+R    EAA P            L    L+     VP L ++ PRVYLAKD ET QSRGFAFVS+  + DAE A+  LQGYGYDHLILKLEWAKPS +    + G  G    SGYG+ L Q+
Sbjct:    8 WGDEEDD-LLPQRCESEPDSNGVRQIVEWKVNEAGDKVKVTKKVKKVTEVERISKRALERKKWAKFGDALDDGDGSNVTYMSYEEVKLEDPNADQVLPVRRRRRRTSLLALRTRPLWSAATVAWWAITGRSSVLTRTHPRRNWQDMAKRAESGEAAAPAAASASLPLVVPLWTAPLAPA-RAVPRL-RSRPRVYLAKDRETFQSRGFAFVSFMYREDAEKALNKLQGYGYDHLILKLEWAKPSNKPTHDDAGSMGTTFRSGYGKALPQN 273          
BLAST of Ec-28_002840.1 vs. uniprot
Match: A0A7S2GQ53_9STRA (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQ53_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.000e-32
Identity = 79/173 (45.66%), Postives = 105/173 (60.69%), Query Frame = 0
Query:  104 EENPNSRGDPLKGPRGPRGGNHPMRTGARRGSPKEAALPEEEGLLRFS---RSHLAVRALS--------GMDEVVPLLGQAWPRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR 265
            EE  +S+  P  G  G  GG+  +  GAR G+   A       L   S   R +  +R  +         + ++    G+ + R+YLAKD ET +SRGFAFVS+ ++ DAE AM+ALQGYGYDHLILKLEWA+PS RD A  G  +    SGYG+ LAQDTK++VS+ASNLT+
Sbjct:  169 EEGADSKDKPTGGMFGGAGGSKYVPPGARAGAVPAAGAAGGRSLSAMSFDDRDYTTIRVTNISEDTKEIDLQDLFETFGRIF-RIYLAKDRETGESRGFAFVSFSRREDAERAMEALQGYGYDHLILKLEWARPSTRDTANAGAEATQFRSGYGKALAQDTKEKVSFASNLTK 340          
BLAST of Ec-28_002840.1 vs. uniprot
Match: F0YAL4_AURAN (Eukaryotic translation initiation factor 3 subunit G n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAL4_AURAN)

HSP 1 Score: 135 bits (339), Expect = 2.580e-32
Identity = 66/90 (73.33%), Postives = 75/90 (83.33%), Query Frame = 0
Query:  176 RVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR 265
            R+YLAKD ETM SRGFAFVSY  + DAE AM ALQG+GYDHLILK+EWAKPS+     EGGLSG  TSGYG+ LAQDTK++VSYASNLT+
Sbjct:  611 RIYLAKDRETMVSRGFAFVSYIHRQDAERAMAALQGHGYDHLILKIEWAKPSVPKPDAEGGLSGGFTSGYGKALAQDTKERVSYASNLTQ 700          
BLAST of Ec-28_002840.1 vs. uniprot
Match: A0A1Z5KQ86_FISSO (Eukaryotic translation initiation factor 3 subunit G n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ86_FISSO)

HSP 1 Score: 122 bits (305), Expect = 2.890e-29
Identity = 106/271 (39.11%), Postives = 138/271 (50.92%), Query Frame = 0
Query:   38 NTNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQGE-DNPSSPIKWREEFRREPPR-DSRKPEENPNS--------------------------RGDPLK--------GPRGPRGGNH---PMRTGARRGSPKEAALPEE--EGLLRFSRSHLAVRALS-GMDEVVPLLGQAWPRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSL-RDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR 265
            N +   +K  TKVKV  E  R  K+  ER QW+KFG A   E +N  + ++ ++E   E P  D+   +E+P                              +P          G   P  G +     R GA  GS   A  PE   + L     ++L+       + E+    G+   RVYLAKD ETMQSRGFAFVS+  +SDA  AM+ALQGYGYDHLILKLEWA+P+  +D AT G  +  R SGYG+ LAQDT  +VSYASNLT+
Sbjct:   54 NNHSQLLKTVTKVKVSVERVREAKAVEERRQWSKFGQALIDEKENTKTTVQSKDEILMEDPHADTDLQDEDPGKAIAGNLNEFWAKQQRRQLERKYDVTGNAEPQDAGWTQVGTGAAAPSTGKYVPPAARGGASGGS--SAFKPERRMDDLNTIRVTNLSENTSEHDLQELFARYGRI-SRVYLAKDKETMQSRGFAFVSFVMQSDAAKAMEALQGYGYDHLILKLEWARPNAPKDPATSG--TEFR-SGYGKALAQDTTAKVSYASNLTK 318          
BLAST of Ec-28_002840.1 vs. uniprot
Match: A0A7S1H2T5_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H2T5_9STRA)

HSP 1 Score: 116 bits (290), Expect = 4.460e-29
Identity = 60/91 (65.93%), Postives = 70/91 (76.92%), Query Frame = 0
Query:  176 RVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMR-TSGYGERLAQDTKQQVSYASNLTR 265
            RVYLAKD ETM SRGFAFVS+  K DA  AM+ LQG+GYDHLILKLEWA+P+      + G SG    SGYG+ LAQDTK++VSYASNLT+
Sbjct:   41 RVYLAKDKETMISRGFAFVSFVHKEDAARAMEKLQGFGYDHLILKLEWARPN---APKDPGASGTEYRSGYGKALAQDTKEKVSYASNLTK 128          
BLAST of Ec-28_002840.1 vs. uniprot
Match: W7TZR7_9STRA (Initiation factor 3g n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZR7_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.020e-27
Identity = 106/294 (36.05%), Postives = 137/294 (46.60%), Query Frame = 0
Query:    5 QAWGDDDDDDYLPPRQESAVDSKGVKSIVEYHFNTNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQG------------------EDNPSSPIK------WREEFRREPPRDSRKPEENPNSRGDPLKGPRGPRGGNH--PMRTGARR---GSPKEAALP---EEEGLLRFSRSHLAVRALSGMDEVVPLLGQ--AWPRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLT 264
            Q WGD +DD+ LP   E   D  GV +  E+ +     KV+   K KV    T V K    R  W +FG A                     ED P++ +K       +   R+     S  P E+  +  D   G  G  GG    P RT   R   G P     P   EE+       ++++       D++  L G+     RV+LAKD E   SRGFAFVS+ +K DA+ AM +LQGYGYDHLIL+LEWA P  +      GL+G   SGYG+RLAQDT    S ASNLT
Sbjct:   18 QDWGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQ-RKVRYVQKFKVEEITTHVPKRTFVRKTWARFGDARDAHVRAEEQSIAIEDPHSLAEDEPAADLKNLGLIQQKLAARKAGLLPSTTPGES-FAEYDGGSGIGGMNGGEEGAPRRTMGERFGGGGPGPQTGPGGREEDKFPTIRVTNVSEDTTD--DDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREERDGLAGGFVSGYGQRLAQDTTMAYSTASNLT 307          
The following BLAST results are available for this feature:
BLAST of Ec-28_002840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTT6_ECTSI5.780e-192100.00Putative initiation factor eIF3 g subunit n=1 Tax=... [more]
A0A835YJN9_9STRA8.380e-6142.95Eukaryotic translation initiation factor 3 subunit... [more]
A0A6H5KD36_9PHAE5.540e-5267.59eIF3g domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A8J2SWG8_9STRA5.760e-3838.29Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A0W8CA84_PHYNI2.180e-3642.01WD repeat-containing protein 36 n=1 Tax=Phytophtho... [more]
A0A7S2GQ53_9STRA2.000e-3245.66Eukaryotic translation initiation factor 3 subunit... [more]
F0YAL4_AURAN2.580e-3273.33Eukaryotic translation initiation factor 3 subunit... [more]
A0A1Z5KQ86_FISSO2.890e-2939.11Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S1H2T5_9STRA4.460e-2965.93Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
W7TZR7_9STRA1.020e-2736.05Initiation factor 3g n=1 Tax=Nannochloropsis gadit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 177..215
e-value: 2.5E-7
score: 30.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 176..226
score: 9.542
IPR024675Eukaryotic translation initiation factor 3 subunit G, N-terminalPFAMPF12353eIF3gcoord: 21..83
e-value: 2.7E-13
score: 50.4
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 172..258
e-value: 1.9E-10
score: 43.0
NoneNo IPR availablePIRSFPIRSF037949Transl_init_eIF-3_RNA-bindcoord: 3..119
e-value: 3.6E-17
score: 60.6
coord: 165..229
e-value: 3.2E-23
score: 80.5
NoneNo IPR availablePANTHERPTHR10352:SF34coord: 165..226
coord: 10..113
NoneNo IPR availablePANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 165..226
coord: 10..113
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 176..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:2669807..2675610 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_002840.1Ec-28_002840.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 2669807..2675610 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_002840.1 ID=Ec-28_002840.1|Name=Ec-28_002840.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=266bp
MPGRQAWGDDDDDDYLPPRQESAVDSKGVKSIVEYHFNTNGAKVKRTTKV
KVFTEHTRVHKSCLERTQWNKFGLAAQGEDNPSSPIKWREEFRREPPRDS
RKPEENPNSRGDPLKGPRGPRGGNHPMRTGARRGSPKEAALPEEEGLLRF
SRSHLAVRALSGMDEVVPLLGQAWPRVYLAKDPETMQSRGFAFVSYYQKS
DAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMRTSGYGERLA
QDTKQQVSYASNLTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR024675eIF3g_N
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf