Ec-28_002160.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_002160.1
Unique NameEc-28_002160.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length393
Homology
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BLAST of Ec-28_002160.1 vs. uniprot
Match: D7FXL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL5_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 2.860e-33
Identity = 137/177 (77.40%), Postives = 139/177 (78.53%), Query Frame = 0 
Query:  216 PAPTRILTPTPAPSADSLPVQVETLPPTPAPTMPAPERLAXXXXXXXXXXXXXXXXXXXXDPTTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGGFLAVPAVGSGVTPSPESSSTVADGDGEGSAATSGTERVRSGALGWLVAAGASAALLPSLFSSP 392
            PAP R+ TP  APS +SLP QVETL PTP                               DPTTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGGFLAVPAVGSGVTPSPESSSTVADGDGEGSAATSGTERVRSGALGWLVAAGASAALLPSLFSSP
Sbjct:    2 PAPERLATP--APSTESLPEQVETLSPTP-------------------------------DPTTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGGFLAVPAVGSGVTPSPESSSTVADGDGEGSAATSGTERVRSGALGWLVAAGASAALLPSLFSSP 145
The following BLAST results are available for this feature:
BLAST of Ec-28_002160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXL5_ECTSI2.860e-3377.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..370
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 390..392
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 371..389
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.598

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:1989936..1995384 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_002160.1Ec-28_002160.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 1989739..1995439 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_002160.1 ID=Ec-28_002160.1|Name=Ec-28_002160.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=393bp
MMPRRAAVVAGLLYALPLAAPQASTCEVVEVTGGASPGSYALQSDGEGDV
YTNGETGAVLLYTTSSIRRGRRRRLAEGEWLSPADNTAADGNQHTSLSGV
EGLVEETIGWRRQQQGQGGGAERRRRSLAECASGFWINLSAGDSSGRSSS
TGADSPSLDGVAYPVYVAPDCADHPVNVTTEWFSIGCATCELEPASPTLS
IECDEDYDNNGGMATPAPTRILTPTPAPSADSLPVQVETLPPTPAPTMPA
PERLATPAPSTESLPEQVETLSPTPDPTTTPGPERLATPAPSTESLPEQV
ETIRPTGVSTTTPAPERLETSAPSAEGGGFLAVPAVGSGVTPSPESSSTV
ADGDGEGSAATSGTERVRSGALGWLVAAGASAALLPSLFSSP*
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