Ec-28_002000.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_002000.1
Unique NameEc-28_002000.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length213
Homology
BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A6H5K4P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4P6_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 1.060e-100
Identity = 151/163 (92.64%), Postives = 157/163 (96.32%), Query Frame = 0
Query:   49 QFCCTISLGAFPPLPPSRGLTRTRRTHSPRALAAISRSVGTRHLEAWIDKTMATPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATED 211
            +FCCTISLGAFPPLPP RG T TRRTH+PRALAA+SRSVGTRHL   IDKTMATPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAK+VVVEADGVLTGATKAQNAKIAGKFDGHLRL+EGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATE+
Sbjct:   33 RFCCTISLGAFPPLPPPRGPTCTRRTHAPRALAAVSRSVGTRHLR--IDKTMATPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKSVVVEADGVLTGATKAQNAKIAGKFDGHLRLTEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATEE 193          
BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A192ILY4_9HYPH (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192ILY4_9HYPH)

HSP 1 Score: 91.3 bits (225), Expect = 2.670e-19
Identity = 45/106 (42.45%), Postives = 68/106 (64.15%), Query Frame = 0
Query:  108 RVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQ-FATEDS 212
            R+++G+GI +KG+I NC E+++ G  DA  VEA    V  +G  +G    + A IAG+FDG L     L V S+G+ KGT+RY  +++E GG++ G+IQ F  E+S
Sbjct:   78 RLLVGEGIKLKGEITNCAELVIEGAVDA-RVEASRFQVSNNGTFSGECNVEEADIAGQFDGTLNCRGKLIVRSTGKLKGTLRYGDVEIEGGGRVAGEIQEFGAEES 182          
BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A2S6SPY9_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha5_Bin5 TaxID=2013080 RepID=A0A2S6SPY9_9PROT)

HSP 1 Score: 84.7 bits (208), Expect = 3.540e-17
Identity = 37/108 (34.26%), Postives = 68/108 (62.96%), Query Frame = 0
Query:  105 TAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATEDS 212
            T+  ++IG+G+ + G IK   EV ++G  D G+V+  TV+V   G + G  KA+  K+ GKF+G + +++ L++ + G   G + Y  IQ+++GGKL G+I +  +++
Sbjct:   42 TSSSLLIGEGVNITGTIKAENEVTIQGSVD-GDVDCHTVIVSKTGSMKGKLKAEIMKVEGKFEGEMNINDQLHIRTKGSVNGKVFYGSIQIDDGGKLLGEINYRGKNN 148          
BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A369TG62_9PROT (Uncharacterized protein n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369TG62_9PROT)

HSP 1 Score: 85.5 bits (210), Expect = 9.280e-17
Identity = 38/109 (34.86%), Postives = 70/109 (64.22%), Query Frame = 0
Query:  103 PTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATED 211
            P  + ++ +G+ I V G+I++C+ ++V G  +A   +++ + V A G   G+     A+IAG+FDG L + E L + S+G+  GTIRYRG+++E+GG++ G +   +E+
Sbjct:   89 PAESKQLTVGRDIEVSGEIRSCDRLVVEGKVEADLSDSRVLEVAASGAFKGSAIIDIAEIAGRFDGDLIVRERLYLRSTGQVNGTIRYRGLEIESGGRIGGTLVELSEE 197          
BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A7V2T8V3_9PROT (Polymer-forming cytoskeletal protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2T8V3_9PROT)

HSP 1 Score: 82.8 bits (203), Expect = 2.920e-16
Identity = 39/117 (33.33%), Postives = 66/117 (56.41%), Query Frame = 0
Query:   97 DKTMATPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLT-GATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATEDS 212
            DK+ A P    R+I+GQGI++ G+I+ C+ +IV G       E + + +   G  T G    + A+I+G ++G L +   L + S+G+  GT+RY  +++E GG++ G I    E S
Sbjct:   48 DKSAAMPAEGKRLIVGQGISLSGEIEACDRLIVEGSVQVTLKETRAIEITETGKFTAGKASVEEAEISGVYEGELTVRNRLLIRSTGKVTGTVRYGELEIERGGRISGSISMLDEKS 164          
BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A2D7PCB5_9PROT (Uncharacterized protein n=1 Tax=Candidatus Pelagibacter sp. TaxID=2024849 RepID=A0A2D7PCB5_9PROT)

HSP 1 Score: 81.3 bits (199), Expect = 9.160e-16
Identity = 42/108 (38.89%), Postives = 65/108 (60.19%), Query Frame = 0
Query:  104 TTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATED 211
            T  G ++IG G++V GDI    EV V G    G V +  + V+  G + G +  + A+I G +DG+L ++  L+VTSSG AKG IRY+ +++  GGK+ G I   ++D
Sbjct:   31 TKEGSIVIGAGVSVTGDIDAPNEVSVNGKH-TGKVVSSKITVKNGGKVDGESSVETAEIEGSYDGNLAVAGTLSVTSSGVAKGEIRYKDLEIALGGKISGTIAEMSDD 137          
BLAST of Ec-28_002000.1 vs. uniprot
Match: UPI0019062186 (polymer-forming cytoskeletal protein n=1 Tax=Rhodovibrio sodomensis TaxID=1088 RepID=UPI0019062186)

HSP 1 Score: 82.4 bits (202), Expect = 4.060e-15
Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = 0
Query:  102 TPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDI 205
            T    G +++GQGITVKG I+NC  ++V G   A  V A+ + V  DGV+ G  +   A +AG+FDG L +   L V   G  KG +RYR + VE GG +  +I
Sbjct:   64 TVAEEGELVVGQGITVKGGIRNCRRLVVHGTVRA-TVPARGLEVGPDGVVEGRIEVAEATVAGRFDGDLIVDGPLTVAPGGLVKGRVRYRTLTVEAGGHVSAEI 166          
BLAST of Ec-28_002000.1 vs. uniprot
Match: UPI00190C2156 (polymer-forming cytoskeletal protein n=1 Tax=Noviherbaspirillum pedocola TaxID=2801341 RepID=UPI00190C2156)

HSP 1 Score: 79.7 bits (195), Expect = 5.000e-15
Identity = 39/111 (35.14%), Postives = 68/111 (61.26%), Query Frame = 0
Query:  102 TPTTAG--RVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATE 210
            TP  +G  ++I+GQ I +KG+I +C+ ++V G  +A  +E++ + +   G   G+ + + A+I G FDG L   + L + S+G+  GTIR+  I +E GG+L GD+Q   +
Sbjct:   61 TPEVSGGSKLIVGQKIKLKGEIADCDTLVVEGQVEA-TMESRVIQIAESGTFKGSVQVEVAEINGTFDGDLTARQKLVIHSTGKVTGTIRFGKIVIEEGGQLSGDVQVGLD 170          
BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A192IE29_9HYPH (Uncharacterized protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A192IE29_9HYPH)

HSP 1 Score: 79.0 bits (193), Expect = 6.900e-15
Identity = 40/124 (32.26%), Postives = 69/124 (55.65%), Query Frame = 0
Query:   88 GTRHLEAWIDKTMATPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGDIQFATED 211
            G R  +A   +  A    A  ++IG+ I VKG+I +CE +++ G  +A     ++  +   GVL G  + Q A+I G+F+G LR+   L V + G A+G I Y  +++E GG++ G+I+    +
Sbjct:   37 GRRGRDAEDRERRAMAAEAKTLVIGKEIHVKGEIGDCERLLINGTAEATLTNCRSFEISETGVLKGEAEVQRAEIMGRFEGTLRVRGRLTVRAGGRAQGNIAYAELEIEPGGRIDGEIEIIEPE 160          
BLAST of Ec-28_002000.1 vs. uniprot
Match: A0A1G7S5U0_9HYPH (Protein CcmA, bactofilin family n=1 Tax=Limimonas halophila TaxID=1082479 RepID=A0A1G7S5U0_9HYPH)

HSP 1 Score: 80.9 bits (198), Expect = 7.050e-15
Identity = 36/106 (33.96%), Postives = 68/106 (64.15%), Query Frame = 0
Query:  108 RVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGVLTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGKLFGD-IQFATEDS 212
            ++I+GQ I + G+I  C++++V G  +A   E + + V   G   G+     A+IAG+F+G L + E LN+ ++G+  GTIRYR +++E+GG++ G  ++ + E++
Sbjct:   99 KLIVGQNIRMSGEIAACDKLLVEGMVEADLTETRELEVAPTGSFKGSAVIDVAEIAGRFEGDLVVRERLNLRANGQVHGTIRYRALEIESGGRIGGTLVELSAEEA 204          
The following BLAST results are available for this feature:
BLAST of Ec-28_002000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K4P6_9PHAE1.060e-10092.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A192ILY4_9HYPH2.670e-1942.45Uncharacterized protein n=2 Tax=Alphaproteobacteri... [more]
A0A2S6SPY9_9PROT3.540e-1734.26Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A369TG62_9PROT9.280e-1734.86Uncharacterized protein n=1 Tax=Ferruginivarius se... [more]
A0A7V2T8V3_9PROT2.920e-1633.33Polymer-forming cytoskeletal protein n=1 Tax=Rhodo... [more]
A0A2D7PCB5_9PROT9.160e-1638.89Uncharacterized protein n=1 Tax=Candidatus Pelagib... [more]
UPI00190621864.060e-1541.35polymer-forming cytoskeletal protein n=1 Tax=Rhodo... [more]
UPI00190C21565.000e-1535.14polymer-forming cytoskeletal protein n=1 Tax=Novih... [more]
A0A192IE29_9HYPH6.900e-1532.26Uncharacterized protein n=3 Tax=Alphaproteobacteri... [more]
A0A1G7S5U0_9HYPH7.050e-1533.96Protein CcmA, bactofilin family n=1 Tax=Limimonas ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 110..205
e-value: 1.5E-16
score: 60.5
IPR007607Bactofilin A/BPANTHERPTHR35024FAMILY NOT NAMEDcoord: 104..210
NoneNo IPR availablePANTHERPTHR35024:SF5coord: 104..210
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:1789887..1793216 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_002000.1Ec-28_002000.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 1789609..1793216 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_002000.1 ID=Ec-28_002000.1|Name=Ec-28_002000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=213bp
MTDGDLHTRIRQEIIVQRPRVSFVLATPIFRSALSLVLIRIFDLDQPHQF
CCTISLGAFPPLPPSRGLTRTRRTHSPRALAAISRSVGTRHLEAWIDKTM
ATPTTAGRVIIGQGITVKGDIKNCEEVIVRGFFDAGNVEAKTVVVEADGV
LTGATKAQNAKIAGKFDGHLRLSEGLNVTSSGEAKGTIRYRGIQVENGGK
LFGDIQFATEDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B